RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 A0A087WUV0 522 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-211ENST00000519401 LIG1P18858 919 aa13.35□□□□□ -0.27
SPIDR-211ENST00000519401 CASTP20810 708 aaKnown RBP13.35□□□□□ -0.27
SPIDR-211ENST00000519401 DHX8Q14562 1220 aaKnown RBP13.35□□□□□ -0.27
SPIDR-211ENST00000519401 FOXD4L5Q5VV16 416 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-211ENST00000519401 GIMAP6Q6P9H5 292 aa13.35□□□□□ -0.27
SPIDR-211ENST00000519401 FOXD4L4Q8WXT5 416 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-211ENST00000519401 IRF6O14896 467 aa13.35□□□□□ -0.27
SPIDR-211ENST00000519401 CLSTN1O94985 981 aa13.35□□□□□ -0.27
SPIDR-211ENST00000519401 ERCC3P19447 782 aa13.35□□□□□ -0.27
SPIDR-211ENST00000519401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.273e-6■■■■□ 21.2
SPIDR-211ENST00000519401 MRFAP1L1Q96HT8 127 aa13.35□□□□□ -0.27
SPIDR-211ENST00000519401 UTP14AQ9BVJ6 771 aaKnown RBP13.35□□□□□ -0.27
SPIDR-211ENST00000519401 CLIP2Q9UDT6 1046 aa13.35□□□□□ -0.27
SPIDR-211ENST00000519401 NUTM2BA6NNL0 878 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-211ENST00000519401 NUTM2EB1AL46 878 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-211ENST00000519401 ERC2O15083 957 aa13.34□□□□□ -0.27
SPIDR-211ENST00000519401 TBC1D8O95759 1140 aa13.34□□□□□ -0.27
SPIDR-211ENST00000519401 KRT28Q7Z3Y7 464 aa13.34□□□□□ -0.27
SPIDR-211ENST00000519401 MORC1Q86VD1 984 aa13.34□□□□□ -0.27
SPIDR-211ENST00000519401 NUTM2AQ8IVF1 878 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-211ENST00000519401 UBXN4Q92575 508 aa13.34□□□□□ -0.27
SPIDR-211ENST00000519401 TRIM5Q9C035 493 aa13.34□□□□□ -0.27
SPIDR-211ENST00000519401 SRCIN1Q9C0H9 1055 aa13.34□□□□□ -0.27
SPIDR-211ENST00000519401 GDPD2Q9HCC8 539 aa13.34□□□□□ -0.27
SPIDR-211ENST00000519401 SH3BP1Q9Y3L3 701 aa13.34□□□□□ -0.27
SPIDR-211ENST00000519401 EFCAB8A8MWE9 144 aa13.33□□□□□ -0.27
SPIDR-211ENST00000519401 LMAN1P49257 510 aa13.33□□□□□ -0.27
SPIDR-211ENST00000519401 NEK4P51957 841 aa13.33□□□□□ -0.27
SPIDR-211ENST00000519401 E2F4Q16254 413 aa13.33□□□□□ -0.27
SPIDR-211ENST00000519401 DNAJC21Q5F1R6 531 aaKnown RBP13.33□□□□□ -0.27
SPIDR-211ENST00000519401 TADA2BQ86TJ2 420 aa13.33□□□□□ -0.27
SPIDR-211ENST00000519401 CABP2Q9NPB3 220 aa13.33□□□□□ -0.27
SPIDR-211ENST00000519401 NRBP1Q9UHY1 535 aa13.33□□□□□ -0.27
SPIDR-211ENST00000519401 MRVI1Q9Y6F6 885 aa13.33□□□□□ -0.27
SPIDR-211ENST00000519401 TTC36A6NLP5 189 aa13.33□□□□□ -0.28
SPIDR-211ENST00000519401 ZBTB7BO15156 539 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-211ENST00000519401 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-211ENST00000519401 EIF5P55010 431 aaKnown RBP13.33□□□□□ -0.28
SPIDR-211ENST00000519401 MAP3K11Q16584 847 aa13.33□□□□□ -0.28
SPIDR-211ENST00000519401 ERC1Q8IUD2 1116 aa13.33□□□□□ -0.28
SPIDR-211ENST00000519401 DNAAF4Q8WXU2 420 aa13.33□□□□□ -0.28
SPIDR-211ENST00000519401 ARHGAP45Q92619 1136 aa13.33□□□□□ -0.28
SPIDR-211ENST00000519401 PUS7Q96PZ0 661 aaKnown RBP13.33□□□□□ -0.28
SPIDR-211ENST00000519401 TOPAZ1Q8N9V7 1692 aa13.33□□□□□ -0.28
SPIDR-211ENST00000519401 PSDA5PKW4 1024 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-211ENST00000519401 EPB41L2O43491 1005 aaKnown RBP13.32□□□□□ -0.28
SPIDR-211ENST00000519401 TYRO3Q06418 890 aa13.32□□□□□ -0.28
SPIDR-211ENST00000519401 MAP9Q49MG5 647 aa13.32□□□□□ -0.28
SPIDR-211ENST00000519401 JAKMIP3Q5VZ66 844 aa13.32□□□□□ -0.28
SPIDR-211ENST00000519401 FAM43BQ6ZT52 329 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-211ENST00000519401 RGS17Q9UGC6 210 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-211ENST00000519401 NSD2O96028 1365 aa13.32□□□□□ -0.28
SPIDR-211ENST00000519401 KIF24Q5T7B8 1368 aa13.32□□□□□ -0.28
SPIDR-211ENST00000519401 SPATA31A3Q5VYP0 1347 aa13.32□□□□□ -0.28
SPIDR-211ENST00000519401 SMC2O95347 1197 aa13.32□□□□□ -0.28
SPIDR-211ENST00000519401 SKILP12757 684 aa13.32□□□□□ -0.28
SPIDR-211ENST00000519401 CC2D1AQ6P1N0 951 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-211ENST00000519401 RBM43Q6ZSC3 357 aaKnown RBP13.32□□□□□ -0.28
SPIDR-211ENST00000519401 CNPY2Q9Y2B0 182 aa13.32□□□□□ -0.28
SPIDR-211ENST00000519401 SSH2Q76I76 1423 aa13.31□□□□□ -0.28
SPIDR-211ENST00000519401 PHLPP2Q6ZVD8 1323 aa13.31□□□□□ -0.28
SPIDR-211ENST00000519401 USP27XA6NNY8 438 aa13.31□□□□□ -0.28
SPIDR-211ENST00000519401 GSDMDP57764 484 aa13.31□□□□□ -0.28
SPIDR-211ENST00000519401 IRX1P78414 480 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-211ENST00000519401 PSME1Q06323 249 aa13.31□□□□□ -0.28
SPIDR-211ENST00000519401 SNW1Q13573 536 aaKnown RBP13.31□□□□□ -0.28
SPIDR-211ENST00000519401 SLC12A5Q9H2X9 1139 aa13.31□□□□□ -0.28
SPIDR-211ENST00000519401 CBX8Q9HC52 389 aa13.31□□□□□ -0.28
SPIDR-211ENST00000519401 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
SPIDR-211ENST00000519401 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 CCZ1BP86790 482 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 CCZ1P86791 482 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-211ENST00000519401 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
SPIDR-211ENST00000519401 NBPF6Q5VWK0 638 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 NBPF5PQ86XG9 351 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-211ENST00000519401 NBPF4Q96M43 638 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 RRP7AQ9Y3A4 280 aaKnown RBP13.3□□□□□ -0.28
SPIDR-211ENST00000519401 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 COL22A1Q8NFW1 1626 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-211ENST00000519401 SBNO1A3KN83 1393 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 EVC2Q86UK5 1308 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 CCP110O43303 1012 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 TADA3O75528 432 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 NEUROD2Q15784 382 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 MEX3CQ5U5Q3 659 aaKnown RBP13.3□□□□□ -0.28
SPIDR-211ENST00000519401 GPR161Q8N6U8 529 aaKnown RBP13.3□□□□□ -0.28
SPIDR-211ENST00000519401 NGDNQ8NEJ9 315 aaKnown RBP13.3□□□□□ -0.28
SPIDR-211ENST00000519401 ARFGAP3Q9NP61 516 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 CCDC61Q9Y6R9 512 aa13.3□□□□□ -0.28
SPIDR-211ENST00000519401 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
SPIDR-211ENST00000519401 SASH3O75995 380 aa13.29□□□□□ -0.28
SPIDR-211ENST00000519401 SEMA3FQ13275 785 aa13.29□□□□□ -0.28
SPIDR-211ENST00000519401 CCDC144BQ3MJ40 725 aa13.29□□□□□ -0.28
SPIDR-211ENST00000519401 LUZP1Q86V48 1076 aa13.29□□□□□ -0.28
SPIDR-211ENST00000519401 CCDC144CPQ8IYA2 1237 aa13.29□□□□□ -0.28
SPIDR-211ENST00000519401 FAM210AQ96ND0 272 aa13.29□□□□□ -0.28
SPIDR-211ENST00000519401 TERF2IPQ9NYB0 399 aa13.29□□□□□ -0.28
SPIDR-211ENST00000519401 TRPM3Q9HCF6 1732 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-211ENST00000519401 TTC21BQ7Z4L5 1316 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms