RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	ZNF521	Q96K83	1311 aa		30.88	■■■□□ 2.53
CNOT7-204	ENST00000518885		E9PSI1	815 aa		30.87	■■■□□ 2.53
CNOT7-204	ENST00000518885	HSPA6	P17066	643 aa		30.87	■■■□□ 2.53
CNOT7-204	ENST00000518885	DPP8	Q6V1X1	898 aa	Predicted RBP	30.87	■■■□□ 2.53
CNOT7-204	ENST00000518885	SPINK5	Q9NQ38	1064 aa	Predicted RBP	30.87	■■■□□ 2.53
CNOT7-204	ENST00000518885	CACNA1F	O60840	1977 aa		30.86	■■■□□ 2.53
CNOT7-204	ENST00000518885	IQCA1L	A6NCM1	817 aa		30.86	■■■□□ 2.53
CNOT7-204	ENST00000518885	PDE8A	O60658	829 aa		30.86	■■■□□ 2.53
CNOT7-204	ENST00000518885	CCDC152	Q4G0S7	254 aa		30.86	■■■□□ 2.53
CNOT7-204	ENST00000518885	LARGE2	Q8N3Y3	721 aa		30.86	■■■□□ 2.53
CNOT7-204	ENST00000518885	WDR90	Q96KV7	1748 aa		30.86	■■■□□ 2.53
CNOT7-204	ENST00000518885	CDHR2	Q9BYE9	1310 aa		30.85	■■■□□ 2.53
CNOT7-204	ENST00000518885	G2E3	Q7L622	706 aa		30.85	■■■□□ 2.53
CNOT7-204	ENST00000518885	MPND	Q8N594	471 aa		30.85	■■■□□ 2.53
CNOT7-204	ENST00000518885	EIF6	P56537	245 aa	Known RBP	30.84	■■■□□ 2.53
CNOT7-204	ENST00000518885	SMC1B	Q8NDV3	1235 aa		30.84	■■■□□ 2.53
CNOT7-204	ENST00000518885	FZD9	O00144	591 aa		30.83	■■■□□ 2.53
CNOT7-204	ENST00000518885	DNAAF4	Q8WXU2	420 aa		30.83	■■■□□ 2.53
CNOT7-204	ENST00000518885	DDN	O94850	711 aa	Predicted RBP	30.82	■■■□□ 2.52
CNOT7-204	ENST00000518885	IGKV5-2	P06315	115 aa		30.82	■■■□□ 2.52
CNOT7-204	ENST00000518885	NIM1K	Q8IY84	436 aa		30.82	■■■□□ 2.52
CNOT7-204	ENST00000518885	RTFDC1	Q9BY42	306 aa	Predicted RBP	30.82	■■■□□ 2.52
CNOT7-204	ENST00000518885	NEURL1B	A8MQ27	555 aa		30.81	■■■□□ 2.52
CNOT7-204	ENST00000518885	PPIP5K2	O43314	1243 aa		30.81	■■■□□ 2.52
CNOT7-204	ENST00000518885	L3MBTL3	Q96JM7	780 aa	Predicted RBP	30.81	■■■□□ 2.52
CNOT7-204	ENST00000518885	GPC2	Q8N158	579 aa		30.8	■■■□□ 2.52
CNOT7-204	ENST00000518885	LINS1	Q8NG48	757 aa		30.8	■■■□□ 2.52
CNOT7-204	ENST00000518885	RPS8	P62241	208 aa	Known RBP	30.79	■■■□□ 2.52
CNOT7-204	ENST00000518885	APLP1	P51693	650 aa		30.78	■■■□□ 2.52
CNOT7-204	ENST00000518885	CWF19L2	Q2TBE0	894 aa	Known RBP	30.78	■■■□□ 2.52
CNOT7-204	ENST00000518885	CELF1	Q92879	486 aa	Known RBP	30.78	■■■□□ 2.52
CNOT7-204	ENST00000518885	ZNF541	Q9H0D2	1346 aa		30.77	■■■□□ 2.52
CNOT7-204	ENST00000518885	CTSW	P56202	376 aa		30.76	■■■□□ 2.51
CNOT7-204	ENST00000518885	GCKR	Q14397	625 aa		30.76	■■■□□ 2.51
CNOT7-204	ENST00000518885	AOC3	Q16853	763 aa		30.76	■■■□□ 2.51
CNOT7-204	ENST00000518885	DIEXF	Q68CQ4	756 aa	Known RBP	30.76	■■■□□ 2.51
CNOT7-204	ENST00000518885	POTEC	B2RU33	542 aa		30.75	■■■□□ 2.51
CNOT7-204	ENST00000518885	CDC5L	Q99459	802 aa	Known RBP	30.75	■■■□□ 2.51
CNOT7-204	ENST00000518885	LRRC37A	A6NMS7	1700 aa		30.74	■■■□□ 2.51
CNOT7-204	ENST00000518885	KIAA2012	Q0VF49	1180 aa		30.74	■■■□□ 2.51
CNOT7-204	ENST00000518885	UBE3B	Q7Z3V4	1068 aa		30.74	■■■□□ 2.51
CNOT7-204	ENST00000518885	JARID2	Q92833	1246 aa	Predicted RBP	30.74	■■■□□ 2.51
CNOT7-204	ENST00000518885	HACL1	Q9UJ83	578 aa		30.74	■■■□□ 2.51
CNOT7-204	ENST00000518885	NSFL1C	Q9UNZ2	370 aa	Known RBP	30.74	■■■□□ 2.51
CNOT7-204	ENST00000518885		H7C1W4	665 aa		30.73	■■■□□ 2.51
CNOT7-204	ENST00000518885	SLFN5	Q08AF3	891 aa		30.73	■■■□□ 2.51
CNOT7-204	ENST00000518885	ANKRD18A	Q8IVF6	992 aa		30.73	■■■□□ 2.51
CNOT7-204	ENST00000518885	EYA3	Q99504	573 aa		30.73	■■■□□ 2.51
CNOT7-204	ENST00000518885	ZNRF3	Q9ULT6	936 aa		30.73	■■■□□ 2.51
CNOT7-204	ENST00000518885	SCN4A	P35499	1836 aa		30.73	■■■□□ 2.51
CNOT7-204	ENST00000518885	LMOD1	P29536	600 aa	Predicted RBP	30.72	■■■□□ 2.51
CNOT7-204	ENST00000518885	GJA3	Q9Y6H8	435 aa		30.72	■■■□□ 2.51
CNOT7-204	ENST00000518885	PNMA8A	Q86V59	439 aa	Predicted RBP	30.71	■■■□□ 2.51
CNOT7-204	ENST00000518885	SEC31B	Q9NQW1	1179 aa		30.71	■■■□□ 2.51
CNOT7-204	ENST00000518885	RTL9	Q8NET4	1388 aa		30.7	■■■□□ 2.51
CNOT7-204	ENST00000518885	WASHC4	Q2M389	1173 aa		30.7	■■■□□ 2.51
CNOT7-204	ENST00000518885	SLC51A	Q86UW1	340 aa		30.7	■■■□□ 2.51
CNOT7-204	ENST00000518885	C6orf229	H3BNL8	230 aa		30.69	■■■□□ 2.5
CNOT7-204	ENST00000518885	TTLL11	Q8NHH1	800 aa		30.69	■■■□□ 2.5
CNOT7-204	ENST00000518885	CCDC85A	Q96PX6	553 aa	Predicted RBP	30.69	■■■□□ 2.5
CNOT7-204	ENST00000518885	TAF1D	Q9H5J8	278 aa	Predicted RBP	30.69	■■■□□ 2.5
CNOT7-204	ENST00000518885	ANKIB1	Q9P2G1	1089 aa		30.69	■■■□□ 2.5
CNOT7-204	ENST00000518885	TNIP1	Q15025	636 aa		30.68	■■■□□ 2.5
CNOT7-204	ENST00000518885	PLA2G12B	Q9BX93	195 aa		30.68	■■■□□ 2.5
CNOT7-204	ENST00000518885	TAF1	P21675	1872 aa		30.67	■■■□□ 2.5
CNOT7-204	ENST00000518885	GPSM2	P81274	684 aa		30.67	■■■□□ 2.5
CNOT7-204	ENST00000518885	BEND3	Q5T5X7	828 aa		30.67	■■■□□ 2.5
CNOT7-204	ENST00000518885	CHADL	Q6NUI6	762 aa		30.67	■■■□□ 2.5
CNOT7-204	ENST00000518885	LDHD	Q86WU2	507 aa		30.67	■■■□□ 2.5
CNOT7-204	ENST00000518885	PODXL2	Q9NZ53	605 aa		30.67	■■■□□ 2.5
CNOT7-204	ENST00000518885	COL4A5	P29400	1685 aa		30.67	■■■□□ 2.5
CNOT7-204	ENST00000518885		F6X3S4	739 aa		30.66	■■■□□ 2.5
CNOT7-204	ENST00000518885	CT47B1	P0C2W7	299 aa	Predicted RBP	30.66	■■■□□ 2.5
CNOT7-204	ENST00000518885	EPHX2	P34913	555 aa		30.66	■■■□□ 2.5
CNOT7-204	ENST00000518885	PTPRC	P08575	1304 aa		30.66	■■■□□ 2.5
CNOT7-204	ENST00000518885	ALDH1L1	O75891	902 aa		30.65	■■■□□ 2.5
CNOT7-204	ENST00000518885	GGA1	Q9UJY5	639 aa		30.65	■■■□□ 2.5
CNOT7-204	ENST00000518885	MYH3	P11055	1940 aa		30.65	■■■□□ 2.5
CNOT7-204	ENST00000518885	IGHMBP2	P38935	993 aa	Known RBP	30.64	■■■□□ 2.5
CNOT7-204	ENST00000518885	ALDH1L2	Q3SY69	923 aa		30.64	■■■□□ 2.5
CNOT7-204	ENST00000518885	SLC4A10	Q6U841	1118 aa		30.64	■■■□□ 2.5
CNOT7-204	ENST00000518885	ZC3H12C	Q9C0D7	883 aa	Known RBP	30.64	■■■□□ 2.5
CNOT7-204	ENST00000518885	SRCIN1	Q9C0H9	1055 aa		30.64	■■■□□ 2.5
CNOT7-204	ENST00000518885	GREM2	Q9H772	168 aa		30.64	■■■□□ 2.5
CNOT7-204	ENST00000518885	CEP350	Q5VT06	3117 aa		30.64	■■■□□ 2.49
CNOT7-204	ENST00000518885	DUOX1	Q9NRD9	1551 aa		30.63	■■■□□ 2.49
CNOT7-204	ENST00000518885		G3V3G9	751 aa		30.63	■■■□□ 2.49
CNOT7-204	ENST00000518885	EAPP	Q56P03	285 aa	Predicted RBP	30.63	■■■□□ 2.49
CNOT7-204	ENST00000518885	DCAF8	Q5TAQ9	597 aa		30.63	■■■□□ 2.49
CNOT7-204	ENST00000518885	CIAPIN1	Q6FI81	312 aa		30.63	■■■□□ 2.49
CNOT7-204	ENST00000518885	TBC1D16	Q8TBP0	767 aa		30.63	■■■□□ 2.49
CNOT7-204	ENST00000518885	BSDC1	Q9NW68	430 aa	Predicted RBP	30.63	■■■□□ 2.49
CNOT7-204	ENST00000518885	C9orf78	Q9NZ63	289 aa	Predicted RBP	30.63	■■■□□ 2.49
CNOT7-204	ENST00000518885	XDH	P47989	1333 aa		30.63	■■■□□ 2.49
CNOT7-204	ENST00000518885	UFL1	O94874	794 aa		30.62	■■■□□ 2.49
CNOT7-204	ENST00000518885	MRPL50	Q8N5N7	158 aa	Known RBP	30.62	■■■□□ 2.49
CNOT7-204	ENST00000518885	POLL	Q9UGP5	575 aa		30.62	■■■□□ 2.49
CNOT7-204	ENST00000518885	CLEC11A	Q9Y240	323 aa		30.62	■■■□□ 2.49
CNOT7-204	ENST00000518885	CASP7	P55210	303 aa		30.61	■■■□□ 2.49
CNOT7-204	ENST00000518885	CXCL9	Q07325	125 aa		30.61	■■■□□ 2.49

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms