RNA–Protein interactions for RNA: ENST00000518840.5

R3HCC1-204, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene R3HCC1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-204ENST00000518840 VPS33BQ9H267 617 aa24.24■■□□□ 1.47
R3HCC1-204ENST00000518840 MPNDQ8N594 471 aa24.23■■□□□ 1.47
R3HCC1-204ENST00000518840 SUPT20HQ8NEM7 779 aa24.23■■□□□ 1.47
R3HCC1-204ENST00000518840 HYPKQ9NX55 129 aa24.23■■□□□ 1.47
R3HCC1-204ENST00000518840 ZNRF3Q9ULT6 936 aa24.23■■□□□ 1.47
R3HCC1-204ENST00000518840 VEGFBP49765 207 aa24.22■■□□□ 1.47
R3HCC1-204ENST00000518840 FMR1Q06787 632 aaKnown RBP eCLIP24.22■■□□□ 1.47
R3HCC1-204ENST00000518840 KIAA2012Q0VF49 1180 aa24.21■■□□□ 1.47
R3HCC1-204ENST00000518840 TNS4Q8IZW8 715 aa24.21■■□□□ 1.47
R3HCC1-204ENST00000518840 IFT57Q9NWB7 429 aa24.21■■□□□ 1.47
R3HCC1-204ENST00000518840 ELL2O00472 640 aaPredicted RBP24.2■■□□□ 1.46
R3HCC1-204ENST00000518840 SF3B3Q15393 1217 aaKnown RBP24.2■■□□□ 1.46
R3HCC1-204ENST00000518840 RTL5Q5HYW3 569 aaPredicted RBP24.2■■□□□ 1.46
R3HCC1-204ENST00000518840 CELF1Q92879 486 aaKnown RBP24.2■■□□□ 1.46
R3HCC1-204ENST00000518840 GPRC5DQ9NZD1 345 aa24.2■■□□□ 1.46
R3HCC1-204ENST00000518840 DDX60Q8IY21 1712 aaKnown RBP24.2■■□□□ 1.46
R3HCC1-204ENST00000518840 DUOX1Q9NRD9 1551 aa24.2■■□□□ 1.46
R3HCC1-204ENST00000518840 TAF1P21675 1872 aa24.19■■□□□ 1.46
R3HCC1-204ENST00000518840 COL4A1P02462 1669 aa24.19■■□□□ 1.46
R3HCC1-204ENST00000518840 TRIM28Q13263 835 aaKnown RBP24.19■■□□□ 1.46
R3HCC1-204ENST00000518840 USP50Q70EL3 339 aaPredicted RBP24.19■■□□□ 1.46
R3HCC1-204ENST00000518840 PHAXQ9H814 394 aaKnown RBP24.19■■□□□ 1.46
R3HCC1-204ENST00000518840 RASSF10A6NK89 507 aa24.18■■□□□ 1.46
R3HCC1-204ENST00000518840 GNAI1P63096 354 aa24.18■■□□□ 1.46
R3HCC1-204ENST00000518840 YDJCA8MPS7 323 aa24.17■■□□□ 1.46
R3HCC1-204ENST00000518840 GMPSP49915 693 aaPredicted RBP24.17■■□□□ 1.46
R3HCC1-204ENST00000518840 CCDC184Q52MB2 194 aa24.17■■□□□ 1.46
R3HCC1-204ENST00000518840 C8orf58Q8NAV2 365 aa24.17■■□□□ 1.46
R3HCC1-204ENST00000518840 TRAF5O00463 557 aa24.16■■□□□ 1.46
R3HCC1-204ENST00000518840 FOXN1O15353 648 aa24.16■■□□□ 1.46
R3HCC1-204ENST00000518840 RAD17O75943 681 aa24.16■■□□□ 1.46
R3HCC1-204ENST00000518840 CIAPIN1Q6FI81 312 aa24.16■■□□□ 1.46
R3HCC1-204ENST00000518840 TMC4Q7Z404 712 aa24.16■■□□□ 1.46
R3HCC1-204ENST00000518840 ADARB2Q9NS39 739 aaKnown RBP24.16■■□□□ 1.46
R3HCC1-204ENST00000518840 LRRC37AA6NMS7 1700 aa24.15■■□□□ 1.46
R3HCC1-204ENST00000518840 IRS4O14654 1257 aaPredicted RBP24.15■■□□□ 1.46
R3HCC1-204ENST00000518840 DEFB115Q30KQ5 88 aa24.15■■□□□ 1.46
R3HCC1-204ENST00000518840 RIC3Q7Z5B4 369 aa24.15■■□□□ 1.46
R3HCC1-204ENST00000518840 CALD1Q05682 793 aaKnown RBP24.14■■□□□ 1.45
R3HCC1-204ENST00000518840 ABT1Q9ULW3 272 aaKnown RBP24.14■■□□□ 1.45
R3HCC1-204ENST00000518840 CAPN15O75808 1086 aa24.13■■□□□ 1.45
R3HCC1-204ENST00000518840 GOLGA2Q08379 1002 aa24.13■■□□□ 1.45
R3HCC1-204ENST00000518840 CST9Q5W186 159 aa24.13■■□□□ 1.45
R3HCC1-204ENST00000518840 NSFL1CQ9UNZ2 370 aaKnown RBP24.13■■□□□ 1.45
R3HCC1-204ENST00000518840 SHTN1A0MZ66 631 aa24.12■■□□□ 1.45
R3HCC1-204ENST00000518840 GPSM2P81274 684 aa24.12■■□□□ 1.45
R3HCC1-204ENST00000518840 TSPYL6Q8N831 410 aa24.12■■□□□ 1.45
R3HCC1-204ENST00000518840 ZBTB38Q8NAP3 1195 aaPredicted RBP24.12■■□□□ 1.45
R3HCC1-204ENST00000518840 MYD88Q99836 296 aa24.12■■□□□ 1.45
R3HCC1-204ENST00000518840 POLLQ9UGP5 575 aa24.12■■□□□ 1.45
R3HCC1-204ENST00000518840 HIRAP54198 1017 aaPredicted RBP24.11■■□□□ 1.45
R3HCC1-204ENST00000518840 TNIP1Q15025 636 aa24.11■■□□□ 1.45
R3HCC1-204ENST00000518840 BCL2L13Q9BXK5 485 aa24.11■■□□□ 1.45
R3HCC1-204ENST00000518840 WBP1LQ9NX94 342 aa24.11■■□□□ 1.45
R3HCC1-204ENST00000518840 WDR33Q9C0J8 1336 aaKnown RBP24.1■■□□□ 1.45
R3HCC1-204ENST00000518840 WASHC4Q2M389 1173 aa24.1■■□□□ 1.45
R3HCC1-204ENST00000518840 TRPM4Q8TD43 1214 aa24.1■■□□□ 1.45
R3HCC1-204ENST00000518840 JARID2Q92833 1246 aaPredicted RBP24.1■■□□□ 1.45
R3HCC1-204ENST00000518840 SEC31BQ9NQW1 1179 aa24.1■■□□□ 1.45
R3HCC1-204ENST00000518840 CDHR2Q9BYE9 1310 aa24.1■■□□□ 1.45
R3HCC1-204ENST00000518840 RIMBP2O15034 1052 aa24.09■■□□□ 1.45
R3HCC1-204ENST00000518840 RPS8P62241 208 aaKnown RBP24.09■■□□□ 1.45
R3HCC1-204ENST00000518840 GPR101Q96P66 508 aaPredicted RBP24.09■■□□□ 1.45
R3HCC1-204ENST00000518840 DBNDD1Q9H9R9 158 aa24.09■■□□□ 1.45
R3HCC1-204ENST00000518840 PGAP2Q9UHJ9 254 aa24.09■■□□□ 1.45
R3HCC1-204ENST00000518840 ZBTB12Q9Y330 459 aaPredicted RBP24.09■■□□□ 1.45
R3HCC1-204ENST00000518840 C6orf229H3BNL8 230 aa24.08■■□□□ 1.45
R3HCC1-204ENST00000518840 CCDC191Q8NCU4 936 aa24.08■■□□□ 1.45
R3HCC1-204ENST00000518840 GLIS2Q9BZE0 524 aaPredicted RBP24.08■■□□□ 1.45
R3HCC1-204ENST00000518840 CNOT7Q9UIV1 285 aaKnown RBP24.08■■□□□ 1.45
R3HCC1-204ENST00000518840 CCDC30Q5VVM6 783 aa24.07■■□□□ 1.44
R3HCC1-204ENST00000518840 TSR2Q969E8 191 aaKnown RBP24.07■■□□□ 1.44
R3HCC1-204ENST00000518840 METTL22Q9BUU2 404 aaPredicted RBP24.07■■□□□ 1.44
R3HCC1-204ENST00000518840 KCNQ5Q9NR82 932 aa24.07■■□□□ 1.44
R3HCC1-204ENST00000518840 PSMD14O00487 310 aa24.06■■□□□ 1.44
R3HCC1-204ENST00000518840 PCCAP05165 728 aaPredicted RBP24.06■■□□□ 1.44
R3HCC1-204ENST00000518840 CTCFP49711 727 aaPredicted RBP24.06■■□□□ 1.44
R3HCC1-204ENST00000518840 MICALL2Q8IY33 904 aa24.06■■□□□ 1.44
R3HCC1-204ENST00000518840 TBC1D16Q8TBP0 767 aa24.06■■□□□ 1.44
R3HCC1-204ENST00000518840 AIDAQ96BJ3 306 aa24.06■■□□□ 1.44
R3HCC1-204ENST00000518840 PRDM10Q9NQV6 1147 aa24.06■■□□□ 1.44
R3HCC1-204ENST00000518840 CWC25Q9NXE8 425 aaPredicted RBP24.06■■□□□ 1.44
R3HCC1-204ENST00000518840 DOK7Q18PE1 504 aa24.05■■□□□ 1.44
R3HCC1-204ENST00000518840 CYP4F22Q6NT55 531 aa24.05■■□□□ 1.44
R3HCC1-204ENST00000518840 CAPNS2Q96L46 248 aa24.05■■□□□ 1.44
R3HCC1-204ENST00000518840 TLL2Q9Y6L7 1015 aa24.05■■□□□ 1.44
R3HCC1-204ENST00000518840 RTL9Q8NET4 1388 aa24.04■■□□□ 1.44
R3HCC1-204ENST00000518840 ZC3H15Q8WU90 426 aaKnown RBP24.04■■□□□ 1.44
R3HCC1-204ENST00000518840 CCDC85AQ96PX6 553 aaPredicted RBP24.04■■□□□ 1.44
R3HCC1-204ENST00000518840 MAP3K2Q9Y2U5 619 aa24.04■■□□□ 1.44
R3HCC1-204ENST00000518840 H7C1D1 291 aa24.03■■□□□ 1.44
R3HCC1-204ENST00000518840 ECE2O60344 883 aa24.03■■□□□ 1.44
R3HCC1-204ENST00000518840 PDE8AO60658 829 aa24.03■■□□□ 1.44
R3HCC1-204ENST00000518840 CELF2O95319 508 aaKnown RBP24.03■■□□□ 1.44
R3HCC1-204ENST00000518840 DDX58O95786 925 aaKnown RBP24.03■■□□□ 1.44
R3HCC1-204ENST00000518840 LBX1P52954 281 aa24.03■■□□□ 1.44
R3HCC1-204ENST00000518840 PAXIP1Q6ZW49 1069 aaPredicted RBP24.03■■□□□ 1.44
R3HCC1-204ENST00000518840 WWC1Q8IX03 1113 aa24.03■■□□□ 1.44
R3HCC1-204ENST00000518840 DPF2Q92785 391 aa24.03■■□□□ 1.44
R3HCC1-204ENST00000518840 PODXL2Q9NZ53 605 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms