RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GRM5P41594 1212 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 HIF1AQ16665 826 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 TSNAXIP1Q2TAA8 658 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 CAPN12Q6ZSI9 719 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 XAGE2Q96GT9 111 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 PURBQ96QR8 312 aaKnown RBP7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 TIAM1Q13009 1591 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 UTRNP46939 3433 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 SERTM1A2A2V5 107 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 LDHBP07195 334 aaKnown RBP7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 P4HBP07237 508 aaKnown RBP7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 EHHADHQ08426 723 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 TLR1Q15399 786 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 ALG1LQ6GMV1 187 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 TTC16Q8NEE8 873 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 FRMD6Q96NE9 622 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 ESYT1Q9BSJ8 1104 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 IRX2Q9BZI1 471 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 TMPRSS4Q9NRS4 437 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 NLRP1Q9C000 1473 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 AHDC1Q5TGY3 1603 aaPredicted RBP7.09□□□□□ -1.28
HMGB1P23-201ENST00000518743 NINLQ9Y2I6 1382 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 A0A1W2PRU2 124 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 LILRA1O75019 489 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 MRPL58Q14197 206 aaKnown RBP7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 TEAD4Q15561 434 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 COX20Q5RI15 118 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 COL13A1Q5TAT6 717 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 FAM129BQ96TA1 746 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 METTL5Q9NRN9 209 aaKnown RBP7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 SCAF11Q99590 1463 aaKnown RBP7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 RTEL1-TNFRSF6BF6WH68 1400 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 LOC105371045A0A1W2PR82 267 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 WNT7AO00755 349 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 SORBS3O60504 671 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 MZF1P28698 734 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 CLN3Q13286 438 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 DSC3Q14574 896 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 RTN1Q16799 776 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 C11orf91Q3C1V1 193 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 FBF1Q8TES7 1133 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 CNKSR1Q969H4 720 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 ARHGEF10LQ9HCE6 1279 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 SIAH2O43255 324 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 FZD6O60353 706 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 ADH1AP07327 375 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 CANXP27824 592 aaKnown RBP7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 ERCC5P28715 1186 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 MAPK8P45983 427 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 TMC4Q7Z404 712 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 EMID1Q96A84 441 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 NLRP3Q96P20 1036 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 BACH2Q9BYV9 841 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 SAP130Q9H0E3 1048 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 UNC13BO14795 1591 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 DIP2AQ14689 1571 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 KDM5AP29375 1690 aaKnown RBP7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 TNFRSF10BO14763 440 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 PSMD2Q13200 908 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 C1orf53Q5VUE5 145 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 UBXN4Q92575 508 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 ZNF232Q9UNY5 417 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 TLL2Q9Y6L7 1015 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 ABCC3O15438 1527 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 PRDM15P57071 1507 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 MIA2Q96PC5 1412 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 KCNA6P17658 529 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 NOS2P35228 1153 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 SLC19A1P41440 591 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 DAB2P98082 770 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 PLA2G2CQ5R387 149 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 NIFKQ9BYG3 293 aaKnown RBP7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 CABP1Q9NZU7 370 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 PARP2Q9UGN5 583 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 IQSEC3Q9UPP2 1182 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 GPC6Q9Y625 555 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 EID1Q9Y6B2 187 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 WASF2Q9Y6W5 498 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 V9GY48 417 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 PZPP20742 1482 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 BRWD3Q6RI45 1802 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 ATRNO75882 1429 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 EML1O00423 815 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 IL2RAP01589 272 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 HSPA6P17066 643 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 ENOX2Q16206 610 aaKnown RBP7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 NAALADL2Q58DX5 795 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 ALDH16A1Q8IZ83 802 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 GJD3Q8N144 294 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 TMEM87AQ8NBN3 555 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 DNAJC25Q9H1X3 360 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 SPON1Q9HCB6 807 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 RAB6BQ9NRW1 208 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 CCDC87Q9NVE4 849 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 VTI1BQ9UEU0 232 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 A2MP01023 1474 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 SPAG9O60271 1321 aaKnown RBP7.02□□□□□ -1.28
HMGB1P23-201ENST00000518743 ATF3P18847 181 aa7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 GPC1P35052 558 aa7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 ADD1P35611 737 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms