RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CTSWP56202 376 aa27.85■■■□□ 2.05
VEGFA-217ENST00000518538 CCDC152Q4G0S7 254 aa27.85■■■□□ 2.05
VEGFA-217ENST00000518538 CC2D2BQ6DHV5 1058 aa27.85■■■□□ 2.05
VEGFA-217ENST00000518538 OLFM4Q6UX06 510 aa27.85■■■□□ 2.05
VEGFA-217ENST00000518538 API5Q9BZZ5 524 aaKnown RBP27.85■■■□□ 2.05
VEGFA-217ENST00000518538 GRM8O00222 908 aa27.84■■■□□ 2.05
VEGFA-217ENST00000518538 RTKN2Q8IZC4 609 aa27.84■■■□□ 2.05
VEGFA-217ENST00000518538 TAOK3Q9H2K8 898 aa27.84■■■□□ 2.05
VEGFA-217ENST00000518538 LMNB1P20700 586 aa27.83■■■□□ 2.05
VEGFA-217ENST00000518538 C9orf131Q5VYM1 1079 aa27.83■■■□□ 2.05
VEGFA-217ENST00000518538 ARHGAP45Q92619 1136 aa27.83■■■□□ 2.05
VEGFA-217ENST00000518538 ATP6V0A2Q9Y487 856 aa27.83■■■□□ 2.05
VEGFA-217ENST00000518538 SNED1Q8TER0 1413 aa27.83■■■□□ 2.05
VEGFA-217ENST00000518538 BCAR3O75815 825 aa27.82■■■□□ 2.04
VEGFA-217ENST00000518538 GRIPAP1Q4V328 841 aa27.82■■■□□ 2.04
VEGFA-217ENST00000518538 TMC4Q7Z404 712 aa27.82■■■□□ 2.04
VEGFA-217ENST00000518538 C9orf78Q9NZ63 289 aaPredicted RBP27.82■■■□□ 2.04
VEGFA-217ENST00000518538 PRELPP51888 382 aa27.81■■■□□ 2.04
VEGFA-217ENST00000518538 TTLL11Q8NHH1 800 aa27.81■■■□□ 2.04
VEGFA-217ENST00000518538 CELF1Q92879 486 aaKnown RBP27.81■■■□□ 2.04
VEGFA-217ENST00000518538 TMX4Q9H1E5 349 aaPredicted RBP27.81■■■□□ 2.04
VEGFA-217ENST00000518538 RNF181Q9P0P0 153 aa27.81■■■□□ 2.04
VEGFA-217ENST00000518538 SBF1O95248 1867 aa27.81■■■□□ 2.04
VEGFA-217ENST00000518538 FKBP4Q02790 459 aaKnown RBP eCLIP27.8■■■□□ 2.04
VEGFA-217ENST00000518538 SP8Q8IXZ3 490 aa27.8■■■□□ 2.04
VEGFA-217ENST00000518538 MYH3P11055 1940 aa27.8■■■□□ 2.04
VEGFA-217ENST00000518538 RTL9Q8NET4 1388 aa27.79■■■□□ 2.04
VEGFA-217ENST00000518538 IPO8O15397 1037 aaKnown RBP27.79■■■□□ 2.04
VEGFA-217ENST00000518538 CCDC85AQ96PX6 553 aaPredicted RBP27.79■■■□□ 2.04
VEGFA-217ENST00000518538 SEC31BQ9NQW1 1179 aa27.79■■■□□ 2.04
VEGFA-217ENST00000518538 TAF1P21675 1872 aa27.78■■■□□ 2.04
VEGFA-217ENST00000518538 COL4A1P02462 1669 aa27.78■■■□□ 2.04
VEGFA-217ENST00000518538 UTYO14607 1347 aa27.78■■■□□ 2.04
VEGFA-217ENST00000518538 CCT4P50991 539 aaKnown RBP27.78■■■□□ 2.04
VEGFA-217ENST00000518538 SLC51AQ86UW1 340 aa27.78■■■□□ 2.04
VEGFA-217ENST00000518538 PSMD1Q99460 953 aa27.78■■■□□ 2.04
VEGFA-217ENST00000518538 RPS8P62241 208 aaKnown RBP27.77■■■□□ 2.04
VEGFA-217ENST00000518538 GREM2Q9H772 168 aa27.77■■■□□ 2.04
VEGFA-217ENST00000518538 CSF1RP07333 972 aa27.76■■■□□ 2.03
VEGFA-217ENST00000518538 FRAT1Q92837 279 aaPredicted RBP27.76■■■□□ 2.03
VEGFA-217ENST00000518538 LRRC37AA6NMS7 1700 aa27.75■■■□□ 2.03
VEGFA-217ENST00000518538 NBPF7P0C2Y1 421 aaPredicted RBP27.75■■■□□ 2.03
VEGFA-217ENST00000518538 FOXO4P98177 505 aa27.75■■■□□ 2.03
VEGFA-217ENST00000518538 ATF7IPQ6VMQ6 1270 aa27.75■■■□□ 2.03
VEGFA-217ENST00000518538 CDC5LQ99459 802 aaKnown RBP27.75■■■□□ 2.03
VEGFA-217ENST00000518538 ZC3H4Q9UPT8 1303 aaKnown RBP27.74■■■□□ 2.03
VEGFA-217ENST00000518538 TRIM27P14373 513 aa27.74■■■□□ 2.03
VEGFA-217ENST00000518538 ANKRD18AQ8IVF6 992 aa27.74■■■□□ 2.03
VEGFA-217ENST00000518538 ZNF784Q8NCA9 323 aaPredicted RBP27.74■■■□□ 2.03
VEGFA-217ENST00000518538 USP44Q9H0E7 712 aa27.73■■■□□ 2.03
VEGFA-217ENST00000518538 ZNF277Q9NRM2 450 aaPredicted RBP27.73■■■□□ 2.03
VEGFA-217ENST00000518538 FAM161AQ3B820 660 aa27.72■■■□□ 2.03
VEGFA-217ENST00000518538 ZKSCAN2Q63HK3 967 aa27.72■■■□□ 2.03
VEGFA-217ENST00000518538 MPNDQ8N594 471 aa27.72■■■□□ 2.03
VEGFA-217ENST00000518538 SUCLG2Q96I99 432 aa27.72■■■□□ 2.03
VEGFA-217ENST00000518538 CCDC88AQ3V6T2 1871 aa27.72■■■□□ 2.03
VEGFA-217ENST00000518538 ITGA6P23229 1130 aa27.71■■■□□ 2.03
VEGFA-217ENST00000518538 EPHA10Q5JZY3 1008 aa27.71■■■□□ 2.03
VEGFA-217ENST00000518538 INTS3Q68E01 1043 aaKnown RBP27.71■■■□□ 2.03
VEGFA-217ENST00000518538 RTFDC1Q9BY42 306 aaPredicted RBP27.71■■■□□ 2.03
VEGFA-217ENST00000518538 TIAM2Q8IVF5 1701 aa27.7■■■□□ 2.03
VEGFA-217ENST00000518538 IARSP41252 1262 aaKnown RBP27.7■■■□□ 2.02
VEGFA-217ENST00000518538 DPP8Q6V1X1 898 aaPredicted RBP27.7■■■□□ 2.02
VEGFA-217ENST00000518538 YTHDC1Q96MU7 727 aaKnown RBP27.7■■■□□ 2.02
VEGFA-217ENST00000518538 DICER1Q9UPY3 1922 aaKnown RBP27.69■■■□□ 2.02
VEGFA-217ENST00000518538 LMBR1LQ6UX01 489 aa27.69■■■□□ 2.02
VEGFA-217ENST00000518538 SUPT20HQ8NEM7 779 aa27.69■■■□□ 2.02
VEGFA-217ENST00000518538 KAZALD1Q96I82 304 aa27.69■■■□□ 2.02
VEGFA-217ENST00000518538 TNNQ9UQP3 1299 aa27.68■■■□□ 2.02
VEGFA-217ENST00000518538 ANKRD18BA2A2Z9 1011 aa27.67■■■□□ 2.02
VEGFA-217ENST00000518538 IGHMBP2P38935 993 aaKnown RBP27.67■■■□□ 2.02
VEGFA-217ENST00000518538 IFIT5Q13325 482 aaKnown RBP27.67■■■□□ 2.02
VEGFA-217ENST00000518538 VPS33BQ9H267 617 aa27.67■■■□□ 2.02
VEGFA-217ENST00000518538 BSDC1Q9NW68 430 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-217ENST00000518538 CHMP3Q9Y3E7 222 aa27.67■■■□□ 2.02
VEGFA-217ENST00000518538 GPSM2P81274 684 aa27.66■■■□□ 2.02
VEGFA-217ENST00000518538 CLUAP1Q96AJ1 413 aa27.66■■■□□ 2.02
VEGFA-217ENST00000518538 NSFL1CQ9UNZ2 370 aaKnown RBP27.66■■■□□ 2.02
VEGFA-217ENST00000518538 DUOX1Q9NRD9 1551 aa27.65■■■□□ 2.02
VEGFA-217ENST00000518538 RABL6Q3YEC7 729 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-217ENST00000518538 BICC1Q9H694 974 aaKnown RBP27.65■■■□□ 2.02
VEGFA-217ENST00000518538 RCAN3Q9UKA8 241 aa27.65■■■□□ 2.02
VEGFA-217ENST00000518538 LTBP1Q14766 1721 aa27.64■■■□□ 2.02
VEGFA-217ENST00000518538 UBTFL1P0CB47 393 aaPredicted RBP27.64■■■□□ 2.02
VEGFA-217ENST00000518538 ZNF526Q8TF50 670 aaPredicted RBP27.64■■■□□ 2.02
VEGFA-217ENST00000518538 PODXL2Q9NZ53 605 aa27.64■■■□□ 2.02
VEGFA-217ENST00000518538 CCDC57Q2TAC2 916 aa27.63■■■□□ 2.01
VEGFA-217ENST00000518538 LARGE2Q8N3Y3 721 aa27.63■■■□□ 2.01
VEGFA-217ENST00000518538 ANKRD44Q8N8A2 993 aa27.63■■■□□ 2.01
VEGFA-217ENST00000518538 MPHOSPH8Q99549 860 aa27.63■■■□□ 2.01
VEGFA-217ENST00000518538 SPEF2Q9C093 1822 aa27.62■■■□□ 2.01
VEGFA-217ENST00000518538 PPIP5K2O43314 1243 aa27.62■■■□□ 2.01
VEGFA-217ENST00000518538 JDP2Q8WYK2 163 aa27.62■■■□□ 2.01
VEGFA-217ENST00000518538 GPBP1L1Q9HC44 474 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-217ENST00000518538 ANKIB1Q9P2G1 1089 aa27.62■■■□□ 2.01
VEGFA-217ENST00000518538 HDAC5Q9UQL6 1122 aa27.62■■■□□ 2.01
VEGFA-217ENST00000518538 AOC3Q16853 763 aa27.61■■■□□ 2.01
VEGFA-217ENST00000518538 FTSJ3Q8IY81 847 aaKnown RBP27.61■■■□□ 2.01
VEGFA-217ENST00000518538 DZIP1LQ8IYY4 767 aaKnown RBP27.61■■■□□ 2.01
VEGFA-217ENST00000518538 MEIS3Q99687 375 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms