RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 SMG9Q9H0W8 520 aaKnown RBP8.14□□□□□ -1.11
SMN1-210ENST00000518504 RAD21O60216 631 aa8.13□□□□□ -1.11
SMN1-210ENST00000518504 SASH3O75995 380 aa8.13□□□□□ -1.11
SMN1-210ENST00000518504 IDH3AP50213 366 aa8.13□□□□□ -1.11
SMN1-210ENST00000518504 IER5Q5VY09 327 aa8.13□□□□□ -1.11
SMN1-210ENST00000518504 IFT43Q96FT9 208 aa8.13□□□□□ -1.11
SMN1-210ENST00000518504 RARAP10276 462 aa8.12□□□□□ -1.11
SMN1-210ENST00000518504 SEC13P55735 322 aa8.12□□□□□ -1.11
SMN1-210ENST00000518504 FRRS1LQ9P0K9 344 aa8.12□□□□□ -1.11
SMN1-210ENST00000518504 EPB42P16452 691 aa8.11□□□□□ -1.11
SMN1-210ENST00000518504 FSTP19883 344 aa8.11□□□□□ -1.11
SMN1-210ENST00000518504 INPP5BP32019 993 aa8.11□□□□□ -1.11
SMN1-210ENST00000518504 PCSK7Q16549 785 aa8.11□□□□□ -1.11
SMN1-210ENST00000518504 TRPM4Q8TD43 1214 aa8.11□□□□□ -1.11
SMN1-210ENST00000518504 USP20Q9Y2K6 914 aa8.11□□□□□ -1.11
SMN1-210ENST00000518504 MAP3K6O95382 1288 aa8.1□□□□□ -1.11
SMN1-210ENST00000518504 EIF2AK2P19525 551 aaKnown RBP8.1□□□□□ -1.11
SMN1-210ENST00000518504 DGKZQ13574 1117 aa8.1□□□□□ -1.11
SMN1-210ENST00000518504 AKTIPQ9H8T0 292 aa8.1□□□□□ -1.11
SMN1-210ENST00000518504 DLL1O00548 723 aa8.09□□□□□ -1.11
SMN1-210ENST00000518504 J3QW42 95 aa8.08□□□□□ -1.12
SMN1-210ENST00000518504 ARSDP51689 593 aa8.08□□□□□ -1.12
SMN1-210ENST00000518504 GPLD1P80108 840 aa8.08□□□□□ -1.12
SMN1-210ENST00000518504 GDF6Q6KF10 455 aaPredicted RBP8.08□□□□□ -1.12
SMN1-210ENST00000518504 DZIP1LQ8IYY4 767 aaKnown RBP8.08□□□□□ -1.12
SMN1-210ENST00000518504 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
SMN1-210ENST00000518504 UBTFP17480 764 aaKnown RBP8.07□□□□□ -1.12
SMN1-210ENST00000518504 AGGF1Q8N302 714 aaeCLIP8.07□□□□□ -1.12
SMN1-210ENST00000518504 TTC9Q92623 222 aa8.07□□□□□ -1.12
SMN1-210ENST00000518504 TFIP11Q9UBB9 837 aaKnown RBP8.07□□□□□ -1.12
SMN1-210ENST00000518504 F8W735 103 aaPredicted RBP8.06□□□□□ -1.12
SMN1-210ENST00000518504 PLD4Q96BZ4 506 aa8.06□□□□□ -1.12
SMN1-210ENST00000518504 COL17A1Q9UMD9 1497 aaPredicted RBP8.06□□□□□ -1.12
SMN1-210ENST00000518504 PAX4O43316 350 aa8.05□□□□□ -1.12
SMN1-210ENST00000518504 MICAL2O94851 1124 aa8.05□□□□□ -1.12
SMN1-210ENST00000518504 MED26O95402 600 aa8.05□□□□□ -1.12
SMN1-210ENST00000518504 DPYDQ12882 1025 aa8.05□□□□□ -1.12
SMN1-210ENST00000518504 CRTC2Q53ET0 693 aaPredicted RBP8.05□□□□□ -1.12
SMN1-210ENST00000518504 IL22RA1Q8N6P7 574 aa8.05□□□□□ -1.12
SMN1-210ENST00000518504 QTRT2Q9H974 415 aaKnown RBP8.05□□□□□ -1.12
SMN1-210ENST00000518504 GLB1P16278 677 aa8.04□□□□□ -1.12
SMN1-210ENST00000518504 IGFBP4P22692 258 aa8.04□□□□□ -1.12
SMN1-210ENST00000518504 CD97P48960 835 aa8.04□□□□□ -1.12
SMN1-210ENST00000518504 LARP1Q6PKG0 1096 aaKnown RBP8.04□□□□□ -1.12
SMN1-210ENST00000518504 NSUN5Q96P11 429 aaKnown RBP8.04□□□□□ -1.12
SMN1-210ENST00000518504 MRPL18Q9H0U6 180 aaKnown RBP8.04□□□□□ -1.12
SMN1-210ENST00000518504 MAFBQ9Y5Q3 323 aaPredicted RBP8.04□□□□□ -1.12
SMN1-210ENST00000518504 SLC24A1O60721 1099 aa8.03□□□□□ -1.12
SMN1-210ENST00000518504 NRLP54845 237 aa8.03□□□□□ -1.12
SMN1-210ENST00000518504 CMTR1Q8N1G2 835 aaKnown RBP8.03□□□□□ -1.12
SMN1-210ENST00000518504 RTCBQ9Y3I0 505 aaKnown RBP8.03□□□□□ -1.12
SMN1-210ENST00000518504 LOC102724428A0A0B4J2F2 783 aa8.02□□□□□ -1.13
SMN1-210ENST00000518504 OPLAHO14841 1288 aa8.02□□□□□ -1.13
SMN1-210ENST00000518504 TGFB1P01137 390 aa8.02□□□□□ -1.13
SMN1-210ENST00000518504 IRAK1P51617 712 aa8.02□□□□□ -1.13
SMN1-210ENST00000518504 SIK1P57059 783 aa8.02□□□□□ -1.13
SMN1-210ENST00000518504 PTK7Q13308 1070 aa8.02□□□□□ -1.13
SMN1-210ENST00000518504 SETDB1Q15047 1291 aa8.02□□□□□ -1.13
SMN1-210ENST00000518504 RGL4Q8IZJ4 473 aa8.02□□□□□ -1.13
SMN1-210ENST00000518504 TMEM130Q8N3G9 435 aa8.02□□□□□ -1.13
SMN1-210ENST00000518504 TLR7Q9NYK1 1049 aaKnown RBP8.02□□□□□ -1.13
SMN1-210ENST00000518504 XYLBO75191 536 aa8.01□□□□□ -1.13
SMN1-210ENST00000518504 GHRHP01286 108 aa8.01□□□□□ -1.13
SMN1-210ENST00000518504 ARID4AP29374 1257 aaPredicted RBP8.01□□□□□ -1.13
SMN1-210ENST00000518504 C11orf91Q3C1V1 193 aa8.01□□□□□ -1.13
SMN1-210ENST00000518504 TRIM33Q9UPN9 1127 aa8.01□□□□□ -1.13
SMN1-210ENST00000518504 RAXQ9Y2V3 346 aa8.01□□□□□ -1.13
SMN1-210ENST00000518504 OAS3Q9Y6K5 1087 aaKnown RBP8.01□□□□□ -1.13
SMN1-210ENST00000518504 MMP20O60882 483 aa8□□□□□ -1.13
SMN1-210ENST00000518504 PTCD1O75127 700 aaKnown RBP8□□□□□ -1.13
SMN1-210ENST00000518504 GLMNQ92990 594 aa8□□□□□ -1.13
SMN1-210ENST00000518504 UBL7Q96S82 380 aaPredicted RBP8□□□□□ -1.13
SMN1-210ENST00000518504 IGLV1-40P01703 118 aa7.99□□□□□ -1.13
SMN1-210ENST00000518504 PSAPP07602 524 aa7.99□□□□□ -1.13
SMN1-210ENST00000518504 TAL1P17542 331 aaPredicted RBP7.99□□□□□ -1.13
SMN1-210ENST00000518504 VTI1AQ96AJ9 217 aa7.99□□□□□ -1.13
SMN1-210ENST00000518504 LRFN2Q9ULH4 789 aa7.99□□□□□ -1.13
SMN1-210ENST00000518504 USP17L15C9J2P7 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 USP17L10C9JJH3 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 USP17L13C9JLJ4 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 USP17L12C9JPN9 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 USP17L11C9JVI0 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 USP17L21D6R901 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 USP17L18D6R9N7 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 USP17L22D6RA61 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 USP17L17D6RBQ6 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 USP17L19D6RCP7 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 USP17L20D6RJB6 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 COBLO75128 1261 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 TXKP42681 527 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 GP2P55259 537 aaKnown RBP7.98□□□□□ -1.13
SMN1-210ENST00000518504 USP17L24Q0WX57 530 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 KANK4Q5T7N3 995 aaPredicted RBP7.98□□□□□ -1.13
SMN1-210ENST00000518504 SLC51AQ86UW1 340 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 ANKMY2Q8IV38 441 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 STOML1Q9UBI4 398 aa7.98□□□□□ -1.13
SMN1-210ENST00000518504 ADAMTS4O75173 837 aa7.97□□□□□ -1.13
SMN1-210ENST00000518504 WISP1O95388 367 aa7.97□□□□□ -1.13
SMN1-210ENST00000518504 CDC25BP30305 580 aa7.97□□□□□ -1.13
SMN1-210ENST00000518504 TXNDC11Q6PKC3 985 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms