RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 CXCL9Q07325 125 aa23.51■■□□□ 1.35
TFF3-204ENST00000518498 NEUROD2Q15784 382 aa23.51■■□□□ 1.35
TFF3-204ENST00000518498 DPP8Q6V1X1 898 aaPredicted RBP23.51■■□□□ 1.35
TFF3-204ENST00000518498 MPNDQ8N594 471 aa23.51■■□□□ 1.35
TFF3-204ENST00000518498 ADARB2Q9NS39 739 aaKnown RBP23.51■■□□□ 1.35
TFF3-204ENST00000518498 GPRC5DQ9NZD1 345 aa23.51■■□□□ 1.35
TFF3-204ENST00000518498 TRMT112Q9UI30 125 aaKnown RBP23.51■■□□□ 1.35
TFF3-204ENST00000518498 DDX46Q7L014 1031 aaKnown RBP23.5■■□□□ 1.35
TFF3-204ENST00000518498 CHL1O00533 1208 aa23.49■■□□□ 1.35
TFF3-204ENST00000518498 CCDC146Q8IYE0 955 aa23.49■■□□□ 1.35
TFF3-204ENST00000518498 LAS1LQ9Y4W2 734 aaKnown RBP23.49■■□□□ 1.35
TFF3-204ENST00000518498 ECE1P42892 770 aa23.48■■□□□ 1.35
TFF3-204ENST00000518498 NCBP3Q53F19 620 aaKnown RBP23.48■■□□□ 1.35
TFF3-204ENST00000518498 CST9Q5W186 159 aa23.48■■□□□ 1.35
TFF3-204ENST00000518498 SH3TC1Q8TE82 1336 aa23.48■■□□□ 1.35
TFF3-204ENST00000518498 TRAF5O00463 557 aa23.47■■□□□ 1.35
TFF3-204ENST00000518498 GRAPQ13588 217 aa23.47■■□□□ 1.35
TFF3-204ENST00000518498 PAXIP1Q6ZW49 1069 aaPredicted RBP23.47■■□□□ 1.35
TFF3-204ENST00000518498 GRAPLQ8TC17 118 aaPredicted RBP23.47■■□□□ 1.35
TFF3-204ENST00000518498 HSPA8P11142 646 aaKnown RBP23.46■■□□□ 1.35
TFF3-204ENST00000518498 GMPSP49915 693 aaPredicted RBP23.46■■□□□ 1.35
TFF3-204ENST00000518498 KIAA2012Q0VF49 1180 aa23.46■■□□□ 1.35
TFF3-204ENST00000518498 TNIP1Q15025 636 aa23.46■■□□□ 1.35
TFF3-204ENST00000518498 KRT24Q2M2I5 525 aa23.46■■□□□ 1.35
TFF3-204ENST00000518498 CIAPIN1Q6FI81 312 aa23.46■■□□□ 1.35
TFF3-204ENST00000518498 CAPNS2Q96L46 248 aa23.46■■□□□ 1.35
TFF3-204ENST00000518498 TMC4Q7Z404 712 aa23.45■■□□□ 1.34
TFF3-204ENST00000518498 GPR101Q96P66 508 aaPredicted RBP23.45■■□□□ 1.34
TFF3-204ENST00000518498 BCL2L13Q9BXK5 485 aa23.45■■□□□ 1.34
TFF3-204ENST00000518498 ZBED9Q6R2W3 1325 aa23.44■■□□□ 1.34
TFF3-204ENST00000518498 APAF1O14727 1248 aa23.44■■□□□ 1.34
TFF3-204ENST00000518498 GRM1Q13255 1194 aa23.44■■□□□ 1.34
TFF3-204ENST00000518498 CYP4F22Q6NT55 531 aa23.44■■□□□ 1.34
TFF3-204ENST00000518498 PLBD2Q8NHP8 589 aa23.44■■□□□ 1.34
TFF3-204ENST00000518498 BEGAINQ9BUH8 593 aa23.44■■□□□ 1.34
TFF3-204ENST00000518498 CHPF2Q9P2E5 772 aa23.44■■□□□ 1.34
TFF3-204ENST00000518498 TLL2Q9Y6L7 1015 aa23.44■■□□□ 1.34
TFF3-204ENST00000518498 RAD17O75943 681 aa23.43■■□□□ 1.34
TFF3-204ENST00000518498 ANKRD13DQ6ZTN6 518 aa23.43■■□□□ 1.34
TFF3-204ENST00000518498 PGAP2Q9UHJ9 254 aa23.43■■□□□ 1.34
TFF3-204ENST00000518498 TRIM35Q9UPQ4 493 aa23.43■■□□□ 1.34
TFF3-204ENST00000518498 ANKRD36CQ5JPF3 1778 aa23.42■■□□□ 1.34
TFF3-204ENST00000518498 HDGFL1Q5TGJ6 251 aa23.42■■□□□ 1.34
TFF3-204ENST00000518498 ZNF428Q96B54 188 aa23.42■■□□□ 1.34
TFF3-204ENST00000518498 CDHR2Q9BYE9 1310 aa23.41■■□□□ 1.34
TFF3-204ENST00000518498 ZC3H15Q8WU90 426 aaKnown RBP23.41■■□□□ 1.34
TFF3-204ENST00000518498 DBF4Q9UBU7 674 aaPredicted RBP23.41■■□□□ 1.34
TFF3-204ENST00000518498 LAMB2P55268 1798 aa23.41■■□□□ 1.34
TFF3-204ENST00000518498 CELF2O95319 508 aaKnown RBP23.4■■□□□ 1.34
TFF3-204ENST00000518498 HOXB7P09629 217 aa23.4■■□□□ 1.34
TFF3-204ENST00000518498 FAM89AQ96GI7 184 aa23.4■■□□□ 1.34
TFF3-204ENST00000518498 ISCA1Q9BUE6 129 aa23.4■■□□□ 1.34
TFF3-204ENST00000518498 GLIS2Q9BZE0 524 aaPredicted RBP23.4■■□□□ 1.34
TFF3-204ENST00000518498 CNOT7Q9UIV1 285 aaKnown RBP23.4■■□□□ 1.34
TFF3-204ENST00000518498 H7C1D1 291 aa23.39■■□□□ 1.33
TFF3-204ENST00000518498 MAP2K2P36507 400 aa23.39■■□□□ 1.33
TFF3-204ENST00000518498 HIRAP54198 1017 aaPredicted RBP23.39■■□□□ 1.33
TFF3-204ENST00000518498 SF3B3Q15393 1217 aaKnown RBP23.39■■□□□ 1.33
TFF3-204ENST00000518498 NSFL1CQ9UNZ2 370 aaKnown RBP23.39■■□□□ 1.33
TFF3-204ENST00000518498 TRPM7Q96QT4 1865 aa23.39■■□□□ 1.33
TFF3-204ENST00000518498 YDJCA8MPS7 323 aa23.38■■□□□ 1.33
TFF3-204ENST00000518498 ATP5J2-PTCD1G3V325 749 aa23.38■■□□□ 1.33
TFF3-204ENST00000518498 CCDC27Q2M243 656 aa23.38■■□□□ 1.33
TFF3-204ENST00000518498 WASHC4Q2M389 1173 aa23.38■■□□□ 1.33
TFF3-204ENST00000518498 CDC37L1Q7L3B6 337 aa23.38■■□□□ 1.33
TFF3-204ENST00000518498 SAPCD2Q86UD0 394 aa23.38■■□□□ 1.33
TFF3-204ENST00000518498 HYPKQ9NX55 129 aa23.38■■□□□ 1.33
TFF3-204ENST00000518498 AOC2O75106 756 aa23.36■■□□□ 1.33
TFF3-204ENST00000518498 CELF1Q92879 486 aaKnown RBP23.36■■□□□ 1.33
TFF3-204ENST00000518498 HHIPL1Q96JK4 782 aa23.36■■□□□ 1.33
TFF3-204ENST00000518498 CFAP44Q96MT7 982 aa23.36■■□□□ 1.33
TFF3-204ENST00000518498 C6orf229H3BNL8 230 aa23.35■■□□□ 1.33
TFF3-204ENST00000518498 DUSP27Q5VZP5 1158 aa23.35■■□□□ 1.33
TFF3-204ENST00000518498 TRPM4Q8TD43 1214 aa23.35■■□□□ 1.33
TFF3-204ENST00000518498 DPF2Q92785 391 aa23.35■■□□□ 1.33
TFF3-204ENST00000518498 ABHD8Q96I13 439 aa23.35■■□□□ 1.33
TFF3-204ENST00000518498 ZNF408Q9H9D4 720 aa23.35■■□□□ 1.33
TFF3-204ENST00000518498 TAF1P21675 1872 aa23.34■■□□□ 1.33
TFF3-204ENST00000518498 RIMBP2O15034 1052 aa23.34■■□□□ 1.33
TFF3-204ENST00000518498 TRIM28Q13263 835 aaKnown RBP23.34■■□□□ 1.33
TFF3-204ENST00000518498 RTL5Q5HYW3 569 aaPredicted RBP23.34■■□□□ 1.33
TFF3-204ENST00000518498 MICALL2Q8IY33 904 aa23.34■■□□□ 1.33
TFF3-204ENST00000518498 ZBTB12Q9Y330 459 aaPredicted RBP23.34■■□□□ 1.33
TFF3-204ENST00000518498 SHTN1A0MZ66 631 aa23.33■■□□□ 1.33
TFF3-204ENST00000518498 GPSM2P81274 684 aa23.33■■□□□ 1.33
TFF3-204ENST00000518498 DBNDD1Q9H9R9 158 aa23.33■■□□□ 1.33
TFF3-204ENST00000518498 POLLQ9UGP5 575 aa23.33■■□□□ 1.33
TFF3-204ENST00000518498 PSMD14O00487 310 aa23.32■■□□□ 1.32
TFF3-204ENST00000518498 IRS4O14654 1257 aaPredicted RBP23.32■■□□□ 1.32
TFF3-204ENST00000518498 RPS8P62241 208 aaKnown RBP23.32■■□□□ 1.32
TFF3-204ENST00000518498 RIC3Q7Z5B4 369 aa23.32■■□□□ 1.32
TFF3-204ENST00000518498 USP48Q86UV5 1035 aa23.32■■□□□ 1.32
TFF3-204ENST00000518498 EYA3Q99504 573 aa23.32■■□□□ 1.32
TFF3-204ENST00000518498 SALL2Q9Y467 1007 aaPredicted RBP23.32■■□□□ 1.32
TFF3-204ENST00000518498 THSD7BQ9C0I4 1608 aa23.32■■□□□ 1.32
TFF3-204ENST00000518498 SAMD7Q7Z3H4 446 aa23.31■■□□□ 1.32
TFF3-204ENST00000518498 MBIPQ9NS73 344 aa23.31■■□□□ 1.32
TFF3-204ENST00000518498 DUOX1Q9NRD9 1551 aa23.31■■□□□ 1.32
TFF3-204ENST00000518498 DDX60Q8IY21 1712 aaKnown RBP23.3■■□□□ 1.32
TFF3-204ENST00000518498 CA12O43570 354 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms