RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 L3MBTL3Q96JM7 780 aaPredicted RBP13.58□□□□□ -0.24
SPIDR-205ENST00000518060 CWC25Q9NXE8 425 aaPredicted RBP13.58□□□□□ -0.24
SPIDR-205ENST00000518060 HACL1Q9UJ83 578 aa13.58□□□□□ -0.24
SPIDR-205ENST00000518060 IL16Q14005 1332 aa13.58□□□□□ -0.24
SPIDR-205ENST00000518060 HSP90B1P14625 803 aaKnown RBP13.57□□□□□ -0.24
SPIDR-205ENST00000518060 NEXNQ0ZGT2 675 aa13.57□□□□□ -0.24
SPIDR-205ENST00000518060 SP8Q8IXZ3 490 aa13.57□□□□□ -0.24
SPIDR-205ENST00000518060 GPC2Q8N158 579 aa13.57□□□□□ -0.24
SPIDR-205ENST00000518060 ZBTB38Q8NAP3 1195 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-205ENST00000518060 CCDC85AQ96PX6 553 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-205ENST00000518060 METTL22Q9BUU2 404 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-205ENST00000518060 TAF1DQ9H5J8 278 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-205ENST00000518060 PI4KAP2A4QPH2 592 aa13.56□□□□□ -0.24
SPIDR-205ENST00000518060 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
SPIDR-205ENST00000518060 EPHX2P34913 555 aa13.56□□□□□ -0.24
SPIDR-205ENST00000518060 TRIM28Q13263 835 aaKnown RBP13.56□□□□□ -0.24
SPIDR-205ENST00000518060 KSR2Q6VAB6 950 aa13.56□□□□□ -0.24
SPIDR-205ENST00000518060 TMC4Q7Z404 712 aa13.56□□□□□ -0.24
SPIDR-205ENST00000518060 LDHDQ86WU2 507 aa13.56□□□□□ -0.24
SPIDR-205ENST00000518060 PI4KAP1Q8N8J0 262 aa13.56□□□□□ -0.24
SPIDR-205ENST00000518060 CCDC191Q8NCU4 936 aa13.56□□□□□ -0.24
SPIDR-205ENST00000518060 CELF1Q92879 486 aaKnown RBP13.56□□□□□ -0.24
SPIDR-205ENST00000518060 EXOSC9Q06265 439 aaKnown RBP13.55□□□□□ -0.24
SPIDR-205ENST00000518060 SF3B3Q15393 1217 aaKnown RBP13.55□□□□□ -0.24
SPIDR-205ENST00000518060 WDR63Q8IWG1 891 aa13.55□□□□□ -0.24
SPIDR-205ENST00000518060 NSFL1CQ9UNZ2 370 aaKnown RBP13.55□□□□□ -0.24
SPIDR-205ENST00000518060 COL4A5P29400 1685 aa13.55□□□□□ -0.24
SPIDR-205ENST00000518060 LAMB2P55268 1798 aa13.55□□□□□ -0.24
SPIDR-205ENST00000518060 C6orf229H3BNL8 230 aa13.54□□□□□ -0.24
SPIDR-205ENST00000518060 PCCAP05165 728 aaPredicted RBP13.54□□□□□ -0.24
SPIDR-205ENST00000518060 FKBP5Q13451 457 aaPredicted RBP13.54□□□□□ -0.24
SPIDR-205ENST00000518060 CCDC152Q4G0S7 254 aa13.54□□□□□ -0.24
SPIDR-205ENST00000518060 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
SPIDR-205ENST00000518060 G2E3Q7L622 706 aa13.54□□□□□ -0.24
SPIDR-205ENST00000518060 MYH16Q9H6N6 1097 aa13.54□□□□□ -0.24
SPIDR-205ENST00000518060 DDX60Q8IY21 1712 aaKnown RBP13.53□□□□□ -0.24
SPIDR-205ENST00000518060 FLIIQ13045 1269 aa13.53□□□□□ -0.24
SPIDR-205ENST00000518060 PNMA8AQ86V59 439 aaPredicted RBP13.53□□□□□ -0.24
SPIDR-205ENST00000518060 KLRG1Q96E93 195 aa13.53□□□□□ -0.24
SPIDR-205ENST00000518060 RTFDC1Q9BY42 306 aaPredicted RBP13.53□□□□□ -0.24
SPIDR-205ENST00000518060 ZNRF3Q9ULT6 936 aa13.53□□□□□ -0.24
SPIDR-205ENST00000518060 RIMBP2O15034 1052 aa13.52□□□□□ -0.25
SPIDR-205ENST00000518060 PDE8AO60658 829 aa13.52□□□□□ -0.25
SPIDR-205ENST00000518060 RAD17O75943 681 aa13.52□□□□□ -0.25
SPIDR-205ENST00000518060 RPS8P62241 208 aaKnown RBP13.52□□□□□ -0.25
SPIDR-205ENST00000518060 GPSM2P81274 684 aa13.52□□□□□ -0.25
SPIDR-205ENST00000518060 KIAA2012Q0VF49 1180 aa13.52□□□□□ -0.25
SPIDR-205ENST00000518060 CWF19L2Q2TBE0 894 aaKnown RBP13.52□□□□□ -0.25
SPIDR-205ENST00000518060 DNAJC5GQ8N7S2 189 aa13.52□□□□□ -0.25
SPIDR-205ENST00000518060 VPS33BQ9H267 617 aa13.52□□□□□ -0.25
SPIDR-205ENST00000518060 SEC31BQ9NQW1 1179 aa13.52□□□□□ -0.25
SPIDR-205ENST00000518060 IGKV5-2P06315 115 aa13.51□□□□□ -0.25
SPIDR-205ENST00000518060 EPS15P42566 896 aa13.51□□□□□ -0.25
SPIDR-205ENST00000518060 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
SPIDR-205ENST00000518060 MAP1SQ66K74 1059 aaPredicted RBP13.51□□□□□ -0.25
SPIDR-205ENST00000518060 CIAPIN1Q6FI81 312 aa13.51□□□□□ -0.25
SPIDR-205ENST00000518060 BCL2L13Q9BXK5 485 aa13.51□□□□□ -0.25
SPIDR-205ENST00000518060 ANKIB1Q9P2G1 1089 aa13.51□□□□□ -0.25
SPIDR-205ENST00000518060 SCN4AP35499 1836 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 NEURL1BA8MQ27 555 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 G3V3G9 751 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 VAMP4O75379 141 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 UFL1O94874 794 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 GMPSP49915 693 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-205ENST00000518060 SCNN1DP51172 638 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 CTSWP56202 376 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 CXCL9Q07325 125 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 DCAF8Q5TAQ9 597 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 UBE3BQ7Z3V4 1068 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 ANKRD18AQ8IVF6 992 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 GPR101Q96P66 508 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-205ENST00000518060 EYA3Q99504 573 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 DBNDD1Q9H9R9 158 aa13.5□□□□□ -0.25
SPIDR-205ENST00000518060 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-205ENST00000518060 CDHR2Q9BYE9 1310 aa13.49□□□□□ -0.25
SPIDR-205ENST00000518060 TNIP1Q15025 636 aa13.49□□□□□ -0.25
SPIDR-205ENST00000518060 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
SPIDR-205ENST00000518060 DNAAF4Q8WXU2 420 aa13.49□□□□□ -0.25
SPIDR-205ENST00000518060 CDC5LQ99459 802 aaKnown RBP13.49□□□□□ -0.25
SPIDR-205ENST00000518060 MKRN1Q9UHC7 482 aaKnown RBP13.49□□□□□ -0.25
SPIDR-205ENST00000518060 COL4A1P02462 1669 aa13.49□□□□□ -0.25
SPIDR-205ENST00000518060 TAF1P21675 1872 aa13.48□□□□□ -0.25
SPIDR-205ENST00000518060 CNTROBQ8N137 903 aa13.48□□□□□ -0.25
SPIDR-205ENST00000518060 TBC1D16Q8TBP0 767 aa13.48□□□□□ -0.25
SPIDR-205ENST00000518060 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
SPIDR-205ENST00000518060 GPRC5DQ9NZD1 345 aa13.48□□□□□ -0.25
SPIDR-205ENST00000518060 POLLQ9UGP5 575 aa13.48□□□□□ -0.25
SPIDR-205ENST00000518060 GGA1Q9UJY5 639 aa13.48□□□□□ -0.25
SPIDR-205ENST00000518060 DUOX1Q9NRD9 1551 aa13.48□□□□□ -0.25
SPIDR-205ENST00000518060 LRRC37AA6NMS7 1700 aa13.47□□□□□ -0.25
SPIDR-205ENST00000518060 F6X3S4 739 aa13.47□□□□□ -0.25
SPIDR-205ENST00000518060 ECE2O60344 883 aa13.47□□□□□ -0.25
SPIDR-205ENST00000518060 GCKRQ14397 625 aa13.47□□□□□ -0.25
SPIDR-205ENST00000518060 ZC3H12CQ9C0D7 883 aaKnown RBP13.47□□□□□ -0.25
SPIDR-205ENST00000518060 GREM2Q9H772 168 aa13.47□□□□□ -0.25
SPIDR-205ENST00000518060 ADARB2Q9NS39 739 aaKnown RBP13.47□□□□□ -0.25
SPIDR-205ENST00000518060 PASKQ96RG2 1323 aa13.46□□□□□ -0.25
SPIDR-205ENST00000518060 TMEM88BA6NKF7 163 aa13.46□□□□□ -0.25
SPIDR-205ENST00000518060 YDJCA8MPS7 323 aa13.46□□□□□ -0.25
SPIDR-205ENST00000518060 USP50Q70EL3 339 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms