RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 ANKRD31Q8N7Z5 1873 aa8.34□□□□□ -1.07
PABPC1-204ENST00000517990 HEG1Q9ULI3 1381 aa8.34□□□□□ -1.07
PABPC1-204ENST00000517990 SCN7AQ01118 1682 aa8.34□□□□□ -1.08
PABPC1-204ENST00000517990 UBR2Q8IWV8 1755 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 ARFGEF2Q9Y6D5 1785 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 RASSF10A6NK89 507 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 NPR1P16066 1061 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 LMOD1P29536 600 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-204ENST00000517990 ALDH1B1P30837 517 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 MLLT1Q03111 559 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-204ENST00000517990 MTHFSDQ2M296 383 aaKnown RBP8.33□□□□□ -1.08
PABPC1-204ENST00000517990 ZNF790Q6PG37 636 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 CLEC4GQ6UXB4 293 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 TPTE2Q6XPS3 522 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-204ENST00000517990 CNTROBQ8N137 903 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 GAS2L2Q8NHY3 880 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 JDP2Q8WYK2 163 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 ABHD8Q96I13 439 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
PABPC1-204ENST00000517990 WDR33Q9C0J8 1336 aaKnown RBP8.32□□□□□ -1.08
PABPC1-204ENST00000517990 COL11A2P13942 1736 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-204ENST00000517990 SLX4Q8IY92 1834 aa8.32□□□□□ -1.08
PABPC1-204ENST00000517990 CCDC85CA6NKD9 419 aa8.32□□□□□ -1.08
PABPC1-204ENST00000517990 GNAT3A8MTJ3 354 aa8.32□□□□□ -1.08
PABPC1-204ENST00000517990 HSPA8P11142 646 aaKnown RBP8.32□□□□□ -1.08
PABPC1-204ENST00000517990 GTF2E1P29083 439 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-204ENST00000517990 EIF6P56537 245 aaKnown RBP8.32□□□□□ -1.08
PABPC1-204ENST00000517990 FAM161AQ3B820 660 aa8.32□□□□□ -1.08
PABPC1-204ENST00000517990 DZIP3Q86Y13 1208 aaKnown RBP8.32□□□□□ -1.08
PABPC1-204ENST00000517990 GPC2Q8N158 579 aa8.32□□□□□ -1.08
PABPC1-204ENST00000517990 CCDC24Q8N4L8 307 aa8.32□□□□□ -1.08
PABPC1-204ENST00000517990 ZNF496Q96IT1 587 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-204ENST00000517990 CAMTA2O94983 1202 aa8.31□□□□□ -1.08
PABPC1-204ENST00000517990 IARSP41252 1262 aaKnown RBP8.31□□□□□ -1.08
PABPC1-204ENST00000517990 GRIPAP1Q4V328 841 aa8.31□□□□□ -1.08
PABPC1-204ENST00000517990 NYAP1Q6ZVC0 841 aa8.31□□□□□ -1.08
PABPC1-204ENST00000517990 ANKK1Q8NFD2 765 aa8.31□□□□□ -1.08
PABPC1-204ENST00000517990 TMX4Q9H1E5 349 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-204ENST00000517990 ZNF277Q9NRM2 450 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-204ENST00000517990 CIZ1Q9ULV3 898 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-204ENST00000517990 V9GY48 417 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-204ENST00000517990 RNF123Q5XPI4 1314 aa8.3□□□□□ -1.08
PABPC1-204ENST00000517990 CLSPNQ9HAW4 1339 aa8.3□□□□□ -1.08
PABPC1-204ENST00000517990 BTBD11A6QL63 1104 aa8.3□□□□□ -1.08
PABPC1-204ENST00000517990 RGL2O15211 777 aa8.3□□□□□ -1.08
PABPC1-204ENST00000517990 CA12O43570 354 aa8.3□□□□□ -1.08
PABPC1-204ENST00000517990 A1BGP04217 495 aa8.3□□□□□ -1.08
PABPC1-204ENST00000517990 MAP1SQ66K74 1059 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-204ENST00000517990 CC2D2BQ6DHV5 1058 aa8.3□□□□□ -1.08
PABPC1-204ENST00000517990 SYNE4Q8N205 404 aa8.3□□□□□ -1.08
PABPC1-204ENST00000517990 TMC2Q8TDI7 906 aa8.3□□□□□ -1.08
PABPC1-204ENST00000517990 ZNF541Q9H0D2 1346 aa8.29□□□□□ -1.08
PABPC1-204ENST00000517990 FZD9O00144 591 aa8.29□□□□□ -1.08
PABPC1-204ENST00000517990 U2SURPO15042 1029 aaKnown RBP8.29□□□□□ -1.08
PABPC1-204ENST00000517990 HSPA5P11021 654 aaKnown RBP8.29□□□□□ -1.08
PABPC1-204ENST00000517990 PTCD2Q8WV60 388 aaKnown RBP8.29□□□□□ -1.08
PABPC1-204ENST00000517990 C7orf43Q8WVR3 580 aa8.29□□□□□ -1.08
PABPC1-204ENST00000517990 CAPNS2Q96L46 248 aa8.29□□□□□ -1.08
PABPC1-204ENST00000517990 CFAP44Q96MT7 982 aa8.29□□□□□ -1.08
PABPC1-204ENST00000517990 GPR101Q96P66 508 aaPredicted RBP8.29□□□□□ -1.08
PABPC1-204ENST00000517990 ZBED2Q9BTP6 218 aa8.29□□□□□ -1.08
PABPC1-204ENST00000517990 NYXQ9GZU5 481 aa8.29□□□□□ -1.08
PABPC1-204ENST00000517990 DDX21Q9NR30 783 aaKnown RBP eCLIP8.29□□□□□ -1.08
PABPC1-204ENST00000517990 NIP7Q9Y221 180 aaKnown RBP eCLIP8.29□□□□□ -1.08
PABPC1-204ENST00000517990 BCORQ6W2J9 1755 aa8.28□□□□□ -1.08
PABPC1-204ENST00000517990 KLRG2A4D1S0 409 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-204ENST00000517990 SNRPA1P09661 255 aaKnown RBP8.28□□□□□ -1.08
PABPC1-204ENST00000517990 MAP2K2P36507 400 aa8.28□□□□□ -1.08
PABPC1-204ENST00000517990 INSM1Q01101 510 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-204ENST00000517990 GRM1Q13255 1194 aa8.28□□□□□ -1.08
PABPC1-204ENST00000517990 USP50Q70EL3 339 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-204ENST00000517990 RTF1Q92541 710 aaKnown RBP8.28□□□□□ -1.08
PABPC1-204ENST00000517990 PSMD1Q99460 953 aa8.28□□□□□ -1.08
PABPC1-204ENST00000517990 GJA3Q9Y6H8 435 aa8.28□□□□□ -1.08
PABPC1-204ENST00000517990 RGS19P49795 217 aa8.27□□□□□ -1.09
PABPC1-204ENST00000517990 BCAMP50895 628 aa8.27□□□□□ -1.09
PABPC1-204ENST00000517990 TRIM26Q12899 539 aaPredicted RBP8.27□□□□□ -1.09
PABPC1-204ENST00000517990 AMER1Q5JTC6 1135 aaPredicted RBP8.27□□□□□ -1.09
PABPC1-204ENST00000517990 LARGE2Q8N3Y3 721 aa8.27□□□□□ -1.09
PABPC1-204ENST00000517990 IL17REQ8NFR9 667 aa8.27□□□□□ -1.09
PABPC1-204ENST00000517990 RPGRQ92834 1020 aaKnown RBP8.27□□□□□ -1.09
PABPC1-204ENST00000517990 ADAMTSL1Q8N6G6 1762 aa8.27□□□□□ -1.09
PABPC1-204ENST00000517990 FAM177BA6PVY3 158 aa8.26□□□□□ -1.09
PABPC1-204ENST00000517990 NIM1KQ8IY84 436 aa8.26□□□□□ -1.09
PABPC1-204ENST00000517990 CFAP53Q96M91 514 aa8.26□□□□□ -1.09
PABPC1-204ENST00000517990 TRPM7Q96QT4 1865 aa8.26□□□□□ -1.09
PABPC1-204ENST00000517990 SIPA1L3O60292 1781 aaPredicted RBP8.25□□□□□ -1.09
PABPC1-204ENST00000517990 CEMIPQ8WUJ3 1361 aa8.25□□□□□ -1.09
PABPC1-204ENST00000517990 CC2D1BQ5T0F9 858 aaKnown RBP8.25□□□□□ -1.09
PABPC1-204ENST00000517990 CYP4F22Q6NT55 531 aa8.25□□□□□ -1.09
PABPC1-204ENST00000517990 RBM17Q96I25 401 aaKnown RBP8.25□□□□□ -1.09
PABPC1-204ENST00000517990 VPS33BQ9H267 617 aa8.25□□□□□ -1.09
PABPC1-204ENST00000517990 NUDCQ9Y266 331 aa8.25□□□□□ -1.09
PABPC1-204ENST00000517990 USP16Q9Y5T5 823 aa8.25□□□□□ -1.09
PABPC1-204ENST00000517990 TLL2Q9Y6L7 1015 aa8.25□□□□□ -1.09
PABPC1-204ENST00000517990 NEFMP07197 916 aa8.24□□□□□ -1.09
PABPC1-204ENST00000517990 BRPF1P55201 1214 aaPredicted RBP8.24□□□□□ -1.09
PABPC1-204ENST00000517990 KIF6Q6ZMV9 814 aa8.24□□□□□ -1.09
PABPC1-204ENST00000517990 SUPT20HQ8NEM7 779 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms