RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 FLAD1Q8NFF5 587 aa13.13□□□□□ -0.31
PABPC1-203ENST00000517921 SETDB2Q96T68 719 aa13.13□□□□□ -0.31
PABPC1-203ENST00000517921 PA2G4Q9UQ80 394 aaKnown RBP13.13□□□□□ -0.31
PABPC1-203ENST00000517921 NOP58Q9Y2X3 529 aaKnown RBP13.13□□□□□ -0.31
PABPC1-203ENST00000517921 COL11A2P13942 1736 aaPredicted RBP13.13□□□□□ -0.31
PABPC1-203ENST00000517921 ARAP2Q8WZ64 1704 aa13.13□□□□□ -0.31
PABPC1-203ENST00000517921 PDE8AO60658 829 aa13.12□□□□□ -0.31
PABPC1-203ENST00000517921 SURF6O75683 361 aaKnown RBP13.12□□□□□ -0.31
PABPC1-203ENST00000517921 CSF1RP07333 972 aa13.12□□□□□ -0.31
PABPC1-203ENST00000517921 PDE4AP27815 886 aa13.12□□□□□ -0.31
PABPC1-203ENST00000517921 PTGER2P43116 358 aa13.12□□□□□ -0.31
PABPC1-203ENST00000517921 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
PABPC1-203ENST00000517921 ANKRD45Q5TZF3 282 aa13.12□□□□□ -0.31
PABPC1-203ENST00000517921 NUTM1Q86Y26 1132 aa13.12□□□□□ -0.31
PABPC1-203ENST00000517921 SLC16A10Q8TF71 515 aa13.12□□□□□ -0.31
PABPC1-203ENST00000517921 LNPKQ9C0E8 428 aa13.12□□□□□ -0.31
PABPC1-203ENST00000517921 NYXQ9GZU5 481 aa13.12□□□□□ -0.31
PABPC1-203ENST00000517921 RIC1Q4ADV7 1423 aa13.12□□□□□ -0.31
PABPC1-203ENST00000517921 SMARCA5O60264 1052 aaPredicted RBP13.11□□□□□ -0.31
PABPC1-203ENST00000517921 HCLS1P14317 486 aaPredicted RBP13.11□□□□□ -0.31
PABPC1-203ENST00000517921 POLD1P28340 1107 aa13.11□□□□□ -0.31
PABPC1-203ENST00000517921 PTPN12Q05209 780 aaKnown RBP13.11□□□□□ -0.31
PABPC1-203ENST00000517921 ERFEQ4G0M1 354 aa13.11□□□□□ -0.31
PABPC1-203ENST00000517921 NBPF5PQ86XG9 351 aaPredicted RBP13.11□□□□□ -0.31
PABPC1-203ENST00000517921 TTLL11Q8NHH1 800 aa13.11□□□□□ -0.31
PABPC1-203ENST00000517921 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
PABPC1-203ENST00000517921 COPRSQ9NQ92 184 aa13.11□□□□□ -0.31
PABPC1-203ENST00000517921 CHMP3Q9Y3E7 222 aa13.11□□□□□ -0.31
PABPC1-203ENST00000517921 RTL9Q8NET4 1388 aa13.1□□□□□ -0.31
PABPC1-203ENST00000517921 APBB1O00213 710 aa13.1□□□□□ -0.31
PABPC1-203ENST00000517921 RAB11FIP3O75154 756 aa13.1□□□□□ -0.31
PABPC1-203ENST00000517921 TM4SF1P30408 202 aa13.1□□□□□ -0.31
PABPC1-203ENST00000517921 RGS3P49796 1198 aa13.1□□□□□ -0.31
PABPC1-203ENST00000517921 HSP90AB4PQ58FF6 505 aa13.1□□□□□ -0.31
PABPC1-203ENST00000517921 KIF13BQ9NQT8 1826 aa13.09□□□□□ -0.31
PABPC1-203ENST00000517921 HSP90B1P14625 803 aaKnown RBP13.09□□□□□ -0.31
PABPC1-203ENST00000517921 DDR1Q08345 913 aa13.09□□□□□ -0.31
PABPC1-203ENST00000517921 SLC10A5Q5PT55 438 aa13.09□□□□□ -0.31
PABPC1-203ENST00000517921 KIF1BPQ96EK5 621 aa13.09□□□□□ -0.31
PABPC1-203ENST00000517921 CCDC85AQ96PX6 553 aaPredicted RBP13.09□□□□□ -0.31
PABPC1-203ENST00000517921 LRRCC1Q9C099 1032 aa13.09□□□□□ -0.31
PABPC1-203ENST00000517921 SIL1Q9H173 461 aa13.09□□□□□ -0.31
PABPC1-203ENST00000517921 GREM2Q9H772 168 aa13.09□□□□□ -0.31
PABPC1-203ENST00000517921 DLEC1Q9Y238 1755 aa13.09□□□□□ -0.31
PABPC1-203ENST00000517921 MYH13Q9UKX3 1938 aa13.08□□□□□ -0.32
PABPC1-203ENST00000517921 POLRMTO00411 1230 aaKnown RBP13.08□□□□□ -0.32
PABPC1-203ENST00000517921 TPTE2Q6XPS3 522 aa13.08□□□□□ -0.32
PABPC1-203ENST00000517921 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
PABPC1-203ENST00000517921 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
PABPC1-203ENST00000517921 RHPN1Q8TCX5 695 aa13.08□□□□□ -0.32
PABPC1-203ENST00000517921 FHDC1Q9C0D6 1143 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-203ENST00000517921 LRRC37AA6NMS7 1700 aa13.08□□□□□ -0.32
PABPC1-203ENST00000517921 SASH1O94885 1247 aa13.07□□□□□ -0.32
PABPC1-203ENST00000517921 ITGA6P23229 1130 aa13.07□□□□□ -0.32
PABPC1-203ENST00000517921 G3BP1Q13283 466 aaKnown RBP eCLIP13.07□□□□□ -0.324e-13■□□□□ 10.9
PABPC1-203ENST00000517921 IFIT5Q13325 482 aaKnown RBP13.07□□□□□ -0.32
PABPC1-203ENST00000517921 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
PABPC1-203ENST00000517921 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
PABPC1-203ENST00000517921 PRR5LQ6MZQ0 368 aa13.07□□□□□ -0.32
PABPC1-203ENST00000517921 C3orf67Q6ZVT6 689 aa13.07□□□□□ -0.32
PABPC1-203ENST00000517921 ERC1Q8IUD2 1116 aa13.07□□□□□ -0.32
PABPC1-203ENST00000517921 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
PABPC1-203ENST00000517921 NLGN1Q8N2Q7 840 aa13.07□□□□□ -0.32
PABPC1-203ENST00000517921 ZNF594Q96JF6 807 aaPredicted RBP13.07□□□□□ -0.32
PABPC1-203ENST00000517921 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
PABPC1-203ENST00000517921 SYT17Q9BSW7 474 aa13.07□□□□□ -0.32
PABPC1-203ENST00000517921 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
PABPC1-203ENST00000517921 SALL3Q9BXA9 1300 aa13.07□□□□□ -0.32
PABPC1-203ENST00000517921 MYH7P12883 1935 aa13.06□□□□□ -0.32
PABPC1-203ENST00000517921 ANKRD18BA2A2Z9 1011 aa13.06□□□□□ -0.32
PABPC1-203ENST00000517921 CIAO1O76071 339 aa13.06□□□□□ -0.32
PABPC1-203ENST00000517921 SERPINB2P05120 415 aa13.06□□□□□ -0.32
PABPC1-203ENST00000517921 GTF2E1P29083 439 aaPredicted RBP13.06□□□□□ -0.32
PABPC1-203ENST00000517921 SF3B3Q15393 1217 aaKnown RBP13.06□□□□□ -0.32
PABPC1-203ENST00000517921 CCDC152Q4G0S7 254 aa13.06□□□□□ -0.32
PABPC1-203ENST00000517921 ATG9AQ7Z3C6 839 aa13.06□□□□□ -0.32
PABPC1-203ENST00000517921 CCDC24Q8N4L8 307 aa13.06□□□□□ -0.32
PABPC1-203ENST00000517921 OTUD7AQ8TE49 926 aaPredicted RBP13.06□□□□□ -0.32
PABPC1-203ENST00000517921 IL1RAPL2Q9NP60 686 aa13.06□□□□□ -0.32
PABPC1-203ENST00000517921 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
PABPC1-203ENST00000517921 ZNF609O15014 1411 aa13.05□□□□□ -0.32
PABPC1-203ENST00000517921 EYA2O00167 538 aa13.05□□□□□ -0.32
PABPC1-203ENST00000517921 TAF7LQ5H9L4 462 aa13.05□□□□□ -0.32
PABPC1-203ENST00000517921 MSL1Q68DK7 614 aa13.05□□□□□ -0.32
PABPC1-203ENST00000517921 C16orf71Q8IYS4 520 aaPredicted RBP13.05□□□□□ -0.32
PABPC1-203ENST00000517921 PUS3Q9BZE2 481 aaKnown RBP13.05□□□□□ -0.32
PABPC1-203ENST00000517921 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.05□□□□□ -0.32
PABPC1-203ENST00000517921 AKAP11Q9UKA4 1901 aa13.05□□□□□ -0.32
PABPC1-203ENST00000517921 NPHP1O15259 732 aa13.04□□□□□ -0.32
PABPC1-203ENST00000517921 MMP10P09238 476 aa13.04□□□□□ -0.32
PABPC1-203ENST00000517921 IL15P40933 162 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-203ENST00000517921 ST5P78524 1137 aa13.04□□□□□ -0.32
PABPC1-203ENST00000517921 LRRC24Q50LG9 513 aa13.04□□□□□ -0.32
PABPC1-203ENST00000517921 PLEKHM2Q8IWE5 1019 aa13.04□□□□□ -0.32
PABPC1-203ENST00000517921 SEC31BQ9NQW1 1179 aa13.04□□□□□ -0.32
PABPC1-203ENST00000517921 KIAA1551Q9HCM1 1747 aa13.04□□□□□ -0.32
PABPC1-203ENST00000517921 MYO5AQ9Y4I1 1855 aaKnown RBP13.04□□□□□ -0.32
PABPC1-203ENST00000517921 YY1P25490 414 aa13.03□□□□□ -0.32
PABPC1-203ENST00000517921 NLRP3Q96P20 1036 aa13.03□□□□□ -0.32
PABPC1-203ENST00000517921 BCL11AQ9H165 835 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms