RNA–Protein interactions for RNA: ENST00000517621.5

TSPAN18-202, Transcript of tetraspanin 18, humanhuman

TSL 3

Gene TSPAN18, Length 827 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-202ENST00000517621 ZNF219Q9P2Y4 722 aaPredicted RBP20.27■□□□□ 0.84
TSPAN18-202ENST00000517621 SLX4Q8IY92 1834 aa20.27■□□□□ 0.84
TSPAN18-202ENST00000517621 ABCC4O15439 1325 aa20.27■□□□□ 0.83
TSPAN18-202ENST00000517621 KIF16BQ96L93 1317 aa20.27■□□□□ 0.83
TSPAN18-202ENST00000517621 F6X3S4 739 aa20.26■□□□□ 0.83
TSPAN18-202ENST00000517621 RARSP54136 660 aaKnown RBP20.26■□□□□ 0.83
TSPAN18-202ENST00000517621 UBE3BQ7Z3V4 1068 aa20.26■□□□□ 0.83
TSPAN18-202ENST00000517621 SUPT20HQ8NEM7 779 aa20.26■□□□□ 0.83
TSPAN18-202ENST00000517621 API5Q9BZZ5 524 aaKnown RBP20.26■□□□□ 0.83
TSPAN18-202ENST00000517621 C9orf78Q9NZ63 289 aaPredicted RBP20.26■□□□□ 0.83
TSPAN18-202ENST00000517621 NFKBIEO00221 500 aa20.25■□□□□ 0.83
TSPAN18-202ENST00000517621 RPS8P62241 208 aaKnown RBP20.25■□□□□ 0.83
TSPAN18-202ENST00000517621 ZNF784Q8NCA9 323 aaPredicted RBP20.25■□□□□ 0.83
TSPAN18-202ENST00000517621 HDAC5Q9UQL6 1122 aa20.25■□□□□ 0.83
TSPAN18-202ENST00000517621 TNRC6CQ9HCJ0 1690 aaKnown RBP20.24■□□□□ 0.83
TSPAN18-202ENST00000517621 GRM8O00222 908 aa20.24■□□□□ 0.83
TSPAN18-202ENST00000517621 CTSWP56202 376 aa20.24■□□□□ 0.83
TSPAN18-202ENST00000517621 CDC5LQ99459 802 aaKnown RBP20.24■□□□□ 0.83
TSPAN18-202ENST00000517621 CCT4P50991 539 aaKnown RBP20.23■□□□□ 0.83
TSPAN18-202ENST00000517621 DPY19L2Q6NUT2 758 aa20.23■□□□□ 0.83
TSPAN18-202ENST00000517621 RTL9Q8NET4 1388 aa20.22■□□□□ 0.83
TSPAN18-202ENST00000517621 TTLL11Q8NHH1 800 aa20.22■□□□□ 0.83
TSPAN18-202ENST00000517621 BCL2L13Q9BXK5 485 aa20.22■□□□□ 0.83
TSPAN18-202ENST00000517621 KDM2BQ8NHM5 1336 aa20.22■□□□□ 0.83
TSPAN18-202ENST00000517621 ANKRD18AQ8IVF6 992 aa20.21■□□□□ 0.83
TSPAN18-202ENST00000517621 MPNDQ8N594 471 aa20.21■□□□□ 0.83
TSPAN18-202ENST00000517621 GPBP1L1Q9HC44 474 aaPredicted RBP20.21■□□□□ 0.83
TSPAN18-202ENST00000517621 NOB1Q9ULX3 412 aaKnown RBP20.21■□□□□ 0.83
TSPAN18-202ENST00000517621 FER1L6Q2WGJ9 1857 aa20.21■□□□□ 0.83
TSPAN18-202ENST00000517621 DDX60Q8IY21 1712 aaKnown RBP20.2■□□□□ 0.82
TSPAN18-202ENST00000517621 CSF1RP07333 972 aa20.2■□□□□ 0.82
TSPAN18-202ENST00000517621 CASP7P55210 303 aa20.2■□□□□ 0.82
TSPAN18-202ENST00000517621 RASSF7Q02833 373 aa20.2■□□□□ 0.82
TSPAN18-202ENST00000517621 DPP8Q6V1X1 898 aaPredicted RBP20.2■□□□□ 0.82
TSPAN18-202ENST00000517621 JDP2Q8WYK2 163 aa20.2■□□□□ 0.82
TSPAN18-202ENST00000517621 RTFDC1Q9BY42 306 aaPredicted RBP20.2■□□□□ 0.82
TSPAN18-202ENST00000517621 LAMB2P55268 1798 aa20.2■□□□□ 0.82
TSPAN18-202ENST00000517621 SBF1O95248 1867 aa20.19■□□□□ 0.82
TSPAN18-202ENST00000517621 UTYO14607 1347 aa20.19■□□□□ 0.82
TSPAN18-202ENST00000517621 IARSP41252 1262 aaKnown RBP20.18■□□□□ 0.82
TSPAN18-202ENST00000517621 JARID2Q92833 1246 aaPredicted RBP20.18■□□□□ 0.82
TSPAN18-202ENST00000517621 CACNA1SQ13698 1873 aa20.18■□□□□ 0.82
TSPAN18-202ENST00000517621 GLTPD2A6NH11 291 aa20.17■□□□□ 0.82
TSPAN18-202ENST00000517621 IGHMBP2P38935 993 aaKnown RBP20.17■□□□□ 0.82
TSPAN18-202ENST00000517621 CELF1Q92879 486 aaKnown RBP20.17■□□□□ 0.82
TSPAN18-202ENST00000517621 BSDC1Q9NW68 430 aaPredicted RBP20.17■□□□□ 0.82
TSPAN18-202ENST00000517621 ZNF277Q9NRM2 450 aaPredicted RBP20.16■□□□□ 0.82
TSPAN18-202ENST00000517621 ANKRD18BA2A2Z9 1011 aa20.15■□□□□ 0.82
TSPAN18-202ENST00000517621 IFIT5Q13325 482 aaKnown RBP20.15■□□□□ 0.82
TSPAN18-202ENST00000517621 OLFM4Q6UX06 510 aa20.15■□□□□ 0.82
TSPAN18-202ENST00000517621 ATF7IPQ6VMQ6 1270 aa20.15■□□□□ 0.82
TSPAN18-202ENST00000517621 EYA3Q99504 573 aa20.15■□□□□ 0.82
TSPAN18-202ENST00000517621 MPHOSPH8Q99549 860 aa20.15■□□□□ 0.82
TSPAN18-202ENST00000517621 GREM2Q9H772 168 aa20.15■□□□□ 0.82
TSPAN18-202ENST00000517621 PODXL2Q9NZ53 605 aa20.15■□□□□ 0.82
TSPAN18-202ENST00000517621 NSFL1CQ9UNZ2 370 aaKnown RBP20.15■□□□□ 0.82
TSPAN18-202ENST00000517621 SNED1Q8TER0 1413 aa20.14■□□□□ 0.81
TSPAN18-202ENST00000517621 ITGA6P23229 1130 aa20.14■□□□□ 0.81
TSPAN18-202ENST00000517621 CCDC57Q2TAC2 916 aa20.14■□□□□ 0.81
TSPAN18-202ENST00000517621 LARGE2Q8N3Y3 721 aa20.14■□□□□ 0.81
TSPAN18-202ENST00000517621 SEC31BQ9NQW1 1179 aa20.14■□□□□ 0.81
TSPAN18-202ENST00000517621 MYH3P11055 1940 aa20.14■□□□□ 0.81
TSPAN18-202ENST00000517621 PRELPP51888 382 aa20.13■□□□□ 0.81
TSPAN18-202ENST00000517621 FOXO4P98177 505 aa20.13■□□□□ 0.81
TSPAN18-202ENST00000517621 ZKSCAN2Q63HK3 967 aa20.13■□□□□ 0.81
TSPAN18-202ENST00000517621 INTS3Q68E01 1043 aaKnown RBP20.13■□□□□ 0.81
TSPAN18-202ENST00000517621 USP44Q9H0E7 712 aa20.13■□□□□ 0.81
TSPAN18-202ENST00000517621 ANKIB1Q9P2G1 1089 aa20.13■□□□□ 0.81
TSPAN18-202ENST00000517621 DICER1Q9UPY3 1922 aaKnown RBP20.13■□□□□ 0.81
TSPAN18-202ENST00000517621 MS4A1P11836 297 aa20.12■□□□□ 0.81
TSPAN18-202ENST00000517621 EIF6P56537 245 aaKnown RBP20.12■□□□□ 0.81
TSPAN18-202ENST00000517621 LMBR1LQ6UX01 489 aa20.12■□□□□ 0.81
TSPAN18-202ENST00000517621 NIM1KQ8IY84 436 aa20.12■□□□□ 0.81
TSPAN18-202ENST00000517621 FRAT1Q92837 279 aaPredicted RBP20.12■□□□□ 0.81
TSPAN18-202ENST00000517621 CCDC85AQ96PX6 553 aaPredicted RBP20.12■□□□□ 0.81
TSPAN18-202ENST00000517621 ANKRD2Q9GZV1 360 aa20.12■□□□□ 0.81
TSPAN18-202ENST00000517621 FZD9O00144 591 aa20.11■□□□□ 0.81
TSPAN18-202ENST00000517621 PPIP5K2O43314 1243 aa20.11■□□□□ 0.81
TSPAN18-202ENST00000517621 BCAR3O75815 825 aa20.11■□□□□ 0.81
TSPAN18-202ENST00000517621 NBPF7P0C2Y1 421 aaPredicted RBP20.11■□□□□ 0.81
TSPAN18-202ENST00000517621 KIAA2012Q0VF49 1180 aa20.11■□□□□ 0.81
TSPAN18-202ENST00000517621 WASHC4Q2M389 1173 aa20.11■□□□□ 0.81
TSPAN18-202ENST00000517621 GGA1Q9UJY5 639 aa20.11■□□□□ 0.81
TSPAN18-202ENST00000517621 CHMP3Q9Y3E7 222 aa20.11■□□□□ 0.81
TSPAN18-202ENST00000517621 CCDC88AQ3V6T2 1871 aa20.11■□□□□ 0.81
TSPAN18-202ENST00000517621 XDHP47989 1333 aa20.1■□□□□ 0.81
TSPAN18-202ENST00000517621 C6orf229H3BNL8 230 aa20.1■□□□□ 0.81
TSPAN18-202ENST00000517621 GNAI3P08754 354 aa20.1■□□□□ 0.81
TSPAN18-202ENST00000517621 UBTFL1P0CB47 393 aaPredicted RBP20.1■□□□□ 0.81
TSPAN18-202ENST00000517621 VEGFAP15692 232 aaPredicted RBP20.1■□□□□ 0.81
TSPAN18-202ENST00000517621 ATP2B4P23634 1241 aa20.1■□□□□ 0.81
TSPAN18-202ENST00000517621 TAF7LQ5H9L4 462 aa20.1■□□□□ 0.81
TSPAN18-202ENST00000517621 ZNF526Q8TF50 670 aaPredicted RBP20.1■□□□□ 0.81
TSPAN18-202ENST00000517621 ZC3H12CQ9C0D7 883 aaKnown RBP20.1■□□□□ 0.81
TSPAN18-202ENST00000517621 FAM161AQ3B820 660 aa20.09■□□□□ 0.81
TSPAN18-202ENST00000517621 RABL6Q3YEC7 729 aaPredicted RBP20.09■□□□□ 0.81
TSPAN18-202ENST00000517621 ZNRF3Q9ULT6 936 aa20.09■□□□□ 0.81
TSPAN18-202ENST00000517621 MINPP1Q9UNW1 487 aa20.09■□□□□ 0.81
TSPAN18-202ENST00000517621 IQCA1LA6NCM1 817 aa20.08■□□□□ 0.81
TSPAN18-202ENST00000517621 TRIM27P14373 513 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms