RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 CDHR2Q9BYE9 1310 aa19■□□□□ 0.63
SCARNA20.5-201ENST00000516991 TRPM7Q96QT4 1865 aa18.99■□□□□ 0.63
SCARNA20.5-201ENST00000516991 EPS15P42566 896 aa18.99■□□□□ 0.63
SCARNA20.5-201ENST00000516991 KIAA2012Q0VF49 1180 aa18.99■□□□□ 0.63
SCARNA20.5-201ENST00000516991 HYPKQ9NX55 129 aa18.99■□□□□ 0.63
SCARNA20.5-201ENST00000516991 ANKRD13DQ6ZTN6 518 aa18.98■□□□□ 0.63
SCARNA20.5-201ENST00000516991 ADARB2Q9NS39 739 aaKnown RBP18.98■□□□□ 0.63
SCARNA20.5-201ENST00000516991 GPRC5DQ9NZD1 345 aa18.98■□□□□ 0.63
SCARNA20.5-201ENST00000516991 FOXN1O15353 648 aa18.97■□□□□ 0.63
SCARNA20.5-201ENST00000516991 CALD1Q05682 793 aaKnown RBP18.97■□□□□ 0.63
SCARNA20.5-201ENST00000516991 DEFB115Q30KQ5 88 aa18.97■□□□□ 0.63
SCARNA20.5-201ENST00000516991 ISCA1Q9BUE6 129 aa18.97■□□□□ 0.63
SCARNA20.5-201ENST00000516991 PRDM10Q9NQV6 1147 aa18.97■□□□□ 0.63
SCARNA20.5-201ENST00000516991 ABT1Q9ULW3 272 aaKnown RBP18.97■□□□□ 0.63
SCARNA20.5-201ENST00000516991 DUOX1Q9NRD9 1551 aa18.97■□□□□ 0.63
SCARNA20.5-201ENST00000516991 CTCFP49711 727 aaPredicted RBP18.96■□□□□ 0.63
SCARNA20.5-201ENST00000516991 CXCL9Q07325 125 aa18.96■□□□□ 0.63
SCARNA20.5-201ENST00000516991 TNIP1Q15025 636 aa18.96■□□□□ 0.63
SCARNA20.5-201ENST00000516991 DUSP27Q5VZP5 1158 aa18.96■□□□□ 0.63
SCARNA20.5-201ENST00000516991 CIAPIN1Q6FI81 312 aa18.96■□□□□ 0.63
SCARNA20.5-201ENST00000516991 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
SCARNA20.5-201ENST00000516991 THSD7BQ9C0I4 1608 aa18.96■□□□□ 0.63
SCARNA20.5-201ENST00000516991 TAF1P21675 1872 aa18.95■□□□□ 0.62
SCARNA20.5-201ENST00000516991 CAPN15O75808 1086 aa18.95■□□□□ 0.62
SCARNA20.5-201ENST00000516991 MBIPQ9NS73 344 aa18.95■□□□□ 0.62
SCARNA20.5-201ENST00000516991 GMPSP49915 693 aaPredicted RBP18.94■□□□□ 0.62
SCARNA20.5-201ENST00000516991 TRIM28Q13263 835 aaKnown RBP18.94■□□□□ 0.62
SCARNA20.5-201ENST00000516991 SF3B3Q15393 1217 aaKnown RBP18.94■□□□□ 0.62
SCARNA20.5-201ENST00000516991 IFT57Q9NWB7 429 aa18.94■□□□□ 0.62
SCARNA20.5-201ENST00000516991 WBP1LQ9NX94 342 aa18.94■□□□□ 0.62
SCARNA20.5-201ENST00000516991 ZNF853P0CG23 659 aa18.93■□□□□ 0.62
SCARNA20.5-201ENST00000516991 HSP90B1P14625 803 aaKnown RBP18.93■□□□□ 0.62
SCARNA20.5-201ENST00000516991 ECE1P42892 770 aa18.93■□□□□ 0.62
SCARNA20.5-201ENST00000516991 GNAI1P63096 354 aa18.93■□□□□ 0.62
SCARNA20.5-201ENST00000516991 MAP2K1Q02750 393 aaPredicted RBP18.93■□□□□ 0.62
SCARNA20.5-201ENST00000516991 GOLGA2Q08379 1002 aa18.93■□□□□ 0.62
SCARNA20.5-201ENST00000516991 BCL2L13Q9BXK5 485 aa18.93■□□□□ 0.62
SCARNA20.5-201ENST00000516991 WDR33Q9C0J8 1336 aaKnown RBP18.93■□□□□ 0.62
SCARNA20.5-201ENST00000516991 ATP5J2-PTCD1G3V325 749 aa18.92■□□□□ 0.62
SCARNA20.5-201ENST00000516991 FAM89AQ96GI7 184 aa18.92■□□□□ 0.62
SCARNA20.5-201ENST00000516991 CHMP4AQ9BY43 222 aa18.92■□□□□ 0.62
SCARNA20.5-201ENST00000516991 RAD17O75943 681 aa18.91■□□□□ 0.62
SCARNA20.5-201ENST00000516991 ZC3H15Q8WU90 426 aaKnown RBP18.91■□□□□ 0.62
SCARNA20.5-201ENST00000516991 IRS4O14654 1257 aaPredicted RBP18.9■□□□□ 0.62
SCARNA20.5-201ENST00000516991 APAF1O14727 1248 aa18.9■□□□□ 0.62
SCARNA20.5-201ENST00000516991 RIC3Q7Z5B4 369 aa18.9■□□□□ 0.62
SCARNA20.5-201ENST00000516991 TRAF5O00463 557 aa18.89■□□□□ 0.61
SCARNA20.5-201ENST00000516991 WASHC4Q2M389 1173 aa18.89■□□□□ 0.61
SCARNA20.5-201ENST00000516991 PAXIP1Q6ZW49 1069 aaPredicted RBP18.89■□□□□ 0.61
SCARNA20.5-201ENST00000516991 ZBTB38Q8NAP3 1195 aaPredicted RBP18.89■□□□□ 0.61
SCARNA20.5-201ENST00000516991 CELF1Q92879 486 aaKnown RBP18.89■□□□□ 0.61
SCARNA20.5-201ENST00000516991 CAPNS2Q96L46 248 aa18.89■□□□□ 0.61
SCARNA20.5-201ENST00000516991 EYA3Q99504 573 aa18.89■□□□□ 0.61
SCARNA20.5-201ENST00000516991 PGAP2Q9UHJ9 254 aa18.89■□□□□ 0.61
SCARNA20.5-201ENST00000516991 TLL2Q9Y6L7 1015 aa18.89■□□□□ 0.61
SCARNA20.5-201ENST00000516991 YDJCA8MPS7 323 aa18.88■□□□□ 0.61
SCARNA20.5-201ENST00000516991 H7C1D1 291 aa18.88■□□□□ 0.61
SCARNA20.5-201ENST00000516991 CST9Q5W186 159 aa18.88■□□□□ 0.61
SCARNA20.5-201ENST00000516991 ZNF428Q96B54 188 aa18.88■□□□□ 0.61
SCARNA20.5-201ENST00000516991 NSFL1CQ9UNZ2 370 aaKnown RBP18.88■□□□□ 0.61
SCARNA20.5-201ENST00000516991 C6orf229H3BNL8 230 aa18.87■□□□□ 0.61
SCARNA20.5-201ENST00000516991 FMR1Q06787 632 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCARNA20.5-201ENST00000516991 RTL5Q5HYW3 569 aaPredicted RBP18.87■□□□□ 0.61
SCARNA20.5-201ENST00000516991 CCDC191Q8NCU4 936 aa18.87■□□□□ 0.61
SCARNA20.5-201ENST00000516991 DPF2Q92785 391 aa18.87■□□□□ 0.61
SCARNA20.5-201ENST00000516991 CNOT7Q9UIV1 285 aaKnown RBP18.87■□□□□ 0.61
SCARNA20.5-201ENST00000516991 DDX58O95786 925 aaKnown RBP18.86■□□□□ 0.61
SCARNA20.5-201ENST00000516991 HSPA8P11142 646 aaKnown RBP18.86■□□□□ 0.61
SCARNA20.5-201ENST00000516991 RPS12P25398 132 aaKnown RBP18.86■□□□□ 0.61
SCARNA20.5-201ENST00000516991 LBX1P52954 281 aa18.86■□□□□ 0.61
SCARNA20.5-201ENST00000516991 RPS8P62241 208 aaKnown RBP18.86■□□□□ 0.61
SCARNA20.5-201ENST00000516991 HHIPL1Q96JK4 782 aa18.86■□□□□ 0.61
SCARNA20.5-201ENST00000516991 BEGAINQ9BUH8 593 aa18.86■□□□□ 0.61
SCARNA20.5-201ENST00000516991 COL4A1P02462 1669 aa18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 CELF2O95319 508 aaKnown RBP18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 PCCAP05165 728 aaPredicted RBP18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 GPSM2P81274 684 aa18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 CCDC30Q5VVM6 783 aa18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 CYP4F22Q6NT55 531 aa18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 CDC37L1Q7L3B6 337 aa18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 MICALL2Q8IY33 904 aa18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 TRPM4Q8TD43 1214 aa18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 MYD88Q99836 296 aa18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 GLIS2Q9BZE0 524 aaPredicted RBP18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 PHAXQ9H814 394 aaKnown RBP18.85■□□□□ 0.61
SCARNA20.5-201ENST00000516991 PSMD14O00487 310 aa18.84■□□□□ 0.61
SCARNA20.5-201ENST00000516991 CCDC152Q4G0S7 254 aa18.84■□□□□ 0.61
SCARNA20.5-201ENST00000516991 GPR101Q96P66 508 aaPredicted RBP18.84■□□□□ 0.61
SCARNA20.5-201ENST00000516991 DBNDD1Q9H9R9 158 aa18.84■□□□□ 0.61
SCARNA20.5-201ENST00000516991 CWC25Q9NXE8 425 aaPredicted RBP18.84■□□□□ 0.61
SCARNA20.5-201ENST00000516991 PODXL2Q9NZ53 605 aa18.84■□□□□ 0.61
SCARNA20.5-201ENST00000516991 POLLQ9UGP5 575 aa18.84■□□□□ 0.61
SCARNA20.5-201ENST00000516991 ELL2O00472 640 aaPredicted RBP18.83■□□□□ 0.6
SCARNA20.5-201ENST00000516991 ECE2O60344 883 aa18.83■□□□□ 0.6
SCARNA20.5-201ENST00000516991 PDE8AO60658 829 aa18.83■□□□□ 0.6
SCARNA20.5-201ENST00000516991 MAP2K2P36507 400 aa18.83■□□□□ 0.6
SCARNA20.5-201ENST00000516991 HIRAP54198 1017 aaPredicted RBP18.83■□□□□ 0.6
SCARNA20.5-201ENST00000516991 SAPCD2Q86UD0 394 aa18.83■□□□□ 0.6
SCARNA20.5-201ENST00000516991 TBC1D16Q8TBP0 767 aa18.83■□□□□ 0.6
SCARNA20.5-201ENST00000516991 RIMBP2O15034 1052 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms