RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 TTLL11Q8NHH1 800 aa14.16□□□□□ -0.14
SCARNA20-201ENST00000516768 GRAPLQ8TC17 118 aaPredicted RBP14.16□□□□□ -0.14
SCARNA20-201ENST00000516768 TAOK3Q9H2K8 898 aa14.16□□□□□ -0.14
SCARNA20-201ENST00000516768 SMC4Q9NTJ3 1288 aa14.16□□□□□ -0.14
SCARNA20-201ENST00000516768 TNRC6CQ9HCJ0 1690 aaKnown RBP14.15□□□□□ -0.14
SCARNA20-201ENST00000516768 RPS8P62241 208 aaKnown RBP14.15□□□□□ -0.14
SCARNA20-201ENST00000516768 FKBP4Q02790 459 aaKnown RBP eCLIP14.15□□□□□ -0.14
SCARNA20-201ENST00000516768 CCDC152Q4G0S7 254 aa14.15□□□□□ -0.14
SCARNA20-201ENST00000516768 TMC4Q7Z404 712 aa14.15□□□□□ -0.14
SCARNA20-201ENST00000516768 PSMD1Q99460 953 aa14.15□□□□□ -0.14
SCARNA20-201ENST00000516768 PLA2G12BQ9BX93 195 aa14.15□□□□□ -0.14
SCARNA20-201ENST00000516768 SRCIN1Q9C0H9 1055 aa14.15□□□□□ -0.14
SCARNA20-201ENST00000516768 TMX4Q9H1E5 349 aaPredicted RBP14.15□□□□□ -0.14
SCARNA20-201ENST00000516768 NOB1Q9ULX3 412 aaKnown RBP14.15□□□□□ -0.14
SCARNA20-201ENST00000516768 CSF1RP07333 972 aa14.14□□□□□ -0.15
SCARNA20-201ENST00000516768 CELF1Q92879 486 aaKnown RBP14.14□□□□□ -0.15
SCARNA20-201ENST00000516768 SEC31BQ9NQW1 1179 aa14.14□□□□□ -0.15
SCARNA20-201ENST00000516768 CTSWP56202 376 aa14.13□□□□□ -0.15
SCARNA20-201ENST00000516768 ARHGAP45Q92619 1136 aa14.13□□□□□ -0.15
SCARNA20-201ENST00000516768 GRM8O00222 908 aa14.12□□□□□ -0.15
SCARNA20-201ENST00000516768 ZNF277Q9NRM2 450 aaPredicted RBP14.12□□□□□ -0.15
SCARNA20-201ENST00000516768 C9orf78Q9NZ63 289 aaPredicted RBP14.12□□□□□ -0.15
SCARNA20-201ENST00000516768 SBF1O95248 1867 aa14.12□□□□□ -0.15
SCARNA20-201ENST00000516768 ZC3H4Q9UPT8 1303 aaKnown RBP14.12□□□□□ -0.15
SCARNA20-201ENST00000516768 BCAR3O75815 825 aa14.11□□□□□ -0.15
SCARNA20-201ENST00000516768 FOXO4P98177 505 aa14.11□□□□□ -0.15
SCARNA20-201ENST00000516768 FER1L6Q2WGJ9 1857 aa14.11□□□□□ -0.15
SCARNA20-201ENST00000516768 SLC51AQ86UW1 340 aa14.11□□□□□ -0.15
SCARNA20-201ENST00000516768 MPNDQ8N594 471 aa14.11□□□□□ -0.15
SCARNA20-201ENST00000516768 SNED1Q8TER0 1413 aa14.11□□□□□ -0.15
SCARNA20-201ENST00000516768 CCDC85AQ96PX6 553 aaPredicted RBP14.11□□□□□ -0.15
SCARNA20-201ENST00000516768 RTFDC1Q9BY42 306 aaPredicted RBP14.11□□□□□ -0.15
SCARNA20-201ENST00000516768 VPS33BQ9H267 617 aa14.11□□□□□ -0.15
SCARNA20-201ENST00000516768 GPBP1L1Q9HC44 474 aaPredicted RBP14.11□□□□□ -0.15
SCARNA20-201ENST00000516768 UTYO14607 1347 aa14.11□□□□□ -0.15
SCARNA20-201ENST00000516768 DDX60Q8IY21 1712 aaKnown RBP14.1□□□□□ -0.15
SCARNA20-201ENST00000516768 IPO8O15397 1037 aaKnown RBP14.1□□□□□ -0.15
SCARNA20-201ENST00000516768 NBPF7P0C2Y1 421 aaPredicted RBP14.1□□□□□ -0.15
SCARNA20-201ENST00000516768 IARSP41252 1262 aaKnown RBP14.1□□□□□ -0.15
SCARNA20-201ENST00000516768 DPY19L2Q6NUT2 758 aa14.1□□□□□ -0.15
SCARNA20-201ENST00000516768 API5Q9BZZ5 524 aaKnown RBP14.1□□□□□ -0.15
SCARNA20-201ENST00000516768 USP44Q9H0E7 712 aa14.1□□□□□ -0.15
SCARNA20-201ENST00000516768 GREM2Q9H772 168 aa14.1□□□□□ -0.15
SCARNA20-201ENST00000516768 GLTPD2A6NH11 291 aa14.09□□□□□ -0.15
SCARNA20-201ENST00000516768 DPP8Q6V1X1 898 aaPredicted RBP14.09□□□□□ -0.15
SCARNA20-201ENST00000516768 ANKRD18AQ8IVF6 992 aa14.09□□□□□ -0.15
SCARNA20-201ENST00000516768 SUPT20HQ8NEM7 779 aa14.09□□□□□ -0.15
SCARNA20-201ENST00000516768 ZNF526Q8TF50 670 aaPredicted RBP14.09□□□□□ -0.15
SCARNA20-201ENST00000516768 CDC5LQ99459 802 aaKnown RBP14.09□□□□□ -0.15
SCARNA20-201ENST00000516768 BSDC1Q9NW68 430 aaPredicted RBP14.09□□□□□ -0.15
SCARNA20-201ENST00000516768 NSFL1CQ9UNZ2 370 aaKnown RBP14.09□□□□□ -0.15
SCARNA20-201ENST00000516768 LAMB2P55268 1798 aa14.09□□□□□ -0.15
SCARNA20-201ENST00000516768 RTL9Q8NET4 1388 aa14.09□□□□□ -0.15
SCARNA20-201ENST00000516768 ITGA6P23229 1130 aa14.08□□□□□ -0.16
SCARNA20-201ENST00000516768 CCT4P50991 539 aaKnown RBP14.08□□□□□ -0.16
SCARNA20-201ENST00000516768 EPHA10Q5JZY3 1008 aa14.08□□□□□ -0.16
SCARNA20-201ENST00000516768 LMBR1LQ6UX01 489 aa14.08□□□□□ -0.16
SCARNA20-201ENST00000516768 KAZALD1Q96I82 304 aa14.08□□□□□ -0.16
SCARNA20-201ENST00000516768 KIF16BQ96L93 1317 aa14.08□□□□□ -0.16
SCARNA20-201ENST00000516768 FZD9O00144 591 aa14.07□□□□□ -0.16
SCARNA20-201ENST00000516768 GPSM2P81274 684 aa14.07□□□□□ -0.16
SCARNA20-201ENST00000516768 JDP2Q8WYK2 163 aa14.07□□□□□ -0.16
SCARNA20-201ENST00000516768 PODXL2Q9NZ53 605 aa14.07□□□□□ -0.16
SCARNA20-201ENST00000516768 TAF1P21675 1872 aa14.07□□□□□ -0.16
SCARNA20-201ENST00000516768 CACNA1SQ13698 1873 aa14.07□□□□□ -0.16
SCARNA20-201ENST00000516768 KDM2BQ8NHM5 1336 aa14.07□□□□□ -0.16
SCARNA20-201ENST00000516768 IFIT5Q13325 482 aaKnown RBP14.06□□□□□ -0.16
SCARNA20-201ENST00000516768 INTS3Q68E01 1043 aaKnown RBP14.06□□□□□ -0.16
SCARNA20-201ENST00000516768 ATF7IPQ6VMQ6 1270 aa14.06□□□□□ -0.16
SCARNA20-201ENST00000516768 LARGE2Q8N3Y3 721 aa14.06□□□□□ -0.16
SCARNA20-201ENST00000516768 FRAT1Q92837 279 aaPredicted RBP14.06□□□□□ -0.16
SCARNA20-201ENST00000516768 SUCLG2Q96I99 432 aa14.06□□□□□ -0.16
SCARNA20-201ENST00000516768 POLLQ9UGP5 575 aa14.06□□□□□ -0.16
SCARNA20-201ENST00000516768 MINPP1Q9UNW1 487 aa14.06□□□□□ -0.16
SCARNA20-201ENST00000516768 ANKRD18BA2A2Z9 1011 aa14.05□□□□□ -0.16
SCARNA20-201ENST00000516768 TRIM27P14373 513 aa14.05□□□□□ -0.16
SCARNA20-201ENST00000516768 IGHMBP2P38935 993 aaKnown RBP14.05□□□□□ -0.16
SCARNA20-201ENST00000516768 KIAA2012Q0VF49 1180 aa14.05□□□□□ -0.16
SCARNA20-201ENST00000516768 AOC3Q16853 763 aa14.05□□□□□ -0.16
SCARNA20-201ENST00000516768 WASHC4Q2M389 1173 aa14.05□□□□□ -0.16
SCARNA20-201ENST00000516768 FAM161AQ3B820 660 aa14.05□□□□□ -0.16
SCARNA20-201ENST00000516768 RRAGCQ9HB90 399 aa14.05□□□□□ -0.16
SCARNA20-201ENST00000516768 ANKIB1Q9P2G1 1089 aa14.05□□□□□ -0.16
SCARNA20-201ENST00000516768 CCDC88AQ3V6T2 1871 aa14.05□□□□□ -0.16
SCARNA20-201ENST00000516768 C6orf229H3BNL8 230 aa14.04□□□□□ -0.16
SCARNA20-201ENST00000516768 KIF3CO14782 793 aa14.04□□□□□ -0.16
SCARNA20-201ENST00000516768 PPIP5K2O43314 1243 aa14.04□□□□□ -0.16
SCARNA20-201ENST00000516768 DDNO94850 711 aaPredicted RBP14.04□□□□□ -0.16
SCARNA20-201ENST00000516768 CCDC57Q2TAC2 916 aa14.04□□□□□ -0.16
SCARNA20-201ENST00000516768 RABL6Q3YEC7 729 aaPredicted RBP14.04□□□□□ -0.16
SCARNA20-201ENST00000516768 ZKSCAN2Q63HK3 967 aa14.04□□□□□ -0.16
SCARNA20-201ENST00000516768 TBC1D16Q8TBP0 767 aa14.04□□□□□ -0.16
SCARNA20-201ENST00000516768 MPHOSPH8Q99549 860 aa14.04□□□□□ -0.16
SCARNA20-201ENST00000516768 NMRK2Q9NPI5 230 aa14.04□□□□□ -0.16
SCARNA20-201ENST00000516768 COL4A1P02462 1669 aa14.04□□□□□ -0.16
SCARNA20-201ENST00000516768 POTECB2RU33 542 aa14.03□□□□□ -0.16
SCARNA20-201ENST00000516768 VEGFAP15692 232 aaPredicted RBP14.03□□□□□ -0.16
SCARNA20-201ENST00000516768 BICC1Q9H694 974 aaKnown RBP14.03□□□□□ -0.16
SCARNA20-201ENST00000516768 XDHP47989 1333 aa14.02□□□□□ -0.17
SCARNA20-201ENST00000516768 ATP2B4P23634 1241 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms