RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	SURF6	O75683	361 aa	Known RBP	5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	STARD3NL	O95772	234 aa		5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	CYP19A1	P11511	503 aa	Predicted RBP	5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	PDE1A	P54750	535 aa		5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	CASP7	P55210	303 aa		5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	RABL6	Q3YEC7	729 aa	Predicted RBP	5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	RHPN1	Q8TCX5	695 aa		5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	TBC1D32	Q96NH3	1257 aa		5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	C8orf37	Q96NL8	207 aa		5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	BICC1	Q9H694	974 aa	Known RBP	5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	UPF2	Q9HAU5	1272 aa	Known RBP	5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	CCDC9	Q9Y3X0	531 aa	Known RBP	5.54	□□□□□ -1.52
ATP2C1-223	ENST00000515854	ITGB4	P16144	1822 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	AOX1	Q06278	1338 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	ARFGEF2	Q9Y6D5	1785 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854		A0A087WZG4	1122 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	ATP5J2-PTCD1	G3V325	749 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854		G3V3G9	751 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	EIF5B	O60841	1220 aa	Known RBP	5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	CDC45	O75419	566 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	SDS	P20132	328 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	MX1	P20591	662 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	MKRN3	Q13064	507 aa	Known RBP	5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	TRIM28	Q13263	835 aa	Known RBP	5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	PDAP1	Q13442	181 aa	Known RBP	5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	TCIRG1	Q13488	830 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	EPHA10	Q5JZY3	1008 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	TBC1D9	Q6ZT07	1266 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	ERC1	Q8IUD2	1116 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	CCDC191	Q8NCU4	936 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	SYTL4	Q96C24	671 aa	Predicted RBP	5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	KIF1BP	Q96EK5	621 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	ISCA1	Q9BUE6	129 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	STK17A	Q9UEE5	414 aa		5.53	□□□□□ -1.52
ATP2C1-223	ENST00000515854	USP42	Q9H9J4	1324 aa	Known RBP	5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	NUP188	Q5SRE5	1749 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	DOT1L	Q8TEK3	1739 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	HSPA1L	P34931	641 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	IL6ST	P40189	918 aa	Predicted RBP	5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	RFX5	P48382	616 aa	Predicted RBP	5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	RBM25	P49756	843 aa	Known RBP	5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	MFAP1	P55081	439 aa	Known RBP	5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	FOXO4	P98177	505 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	FAM98C	Q17RN3	349 aa	Known RBP	5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	ADGRD1	Q6QNK2	874 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	KIF6	Q6ZMV9	814 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	UBE3B	Q7Z3V4	1068 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	SMARCC1	Q92922	1105 aa	Predicted RBP	5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	ACSBG1	Q96GR2	724 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	C22orf23	Q9BZE7	217 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	ZBTB3	Q9H5J0	574 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	IL1RAPL2	Q9NP60	686 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	COPRS	Q9NQ92	184 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	CWC25	Q9NXE8	425 aa	Predicted RBP	5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	USP21	Q9UK80	565 aa		5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	CIC	Q96RK0	1608 aa	Predicted RBP	5.52	□□□□□ -1.53
ATP2C1-223	ENST00000515854	TJP1	Q07157	1748 aa		5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	MAP3K15	Q6ZN16	1313 aa		5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	ERVV-1	B6SEH8	477 aa		5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	ONECUT3	O60422	494 aa	Predicted RBP	5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	SASH1	O94885	1247 aa		5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	PCCA	P05165	728 aa	Predicted RBP	5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	EIF5	P55010	431 aa	Known RBP	5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	PTPN12	Q05209	780 aa	Known RBP	5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	HSP90AB3P	Q58FF7	597 aa		5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	INTS5	Q6P9B9	1019 aa	Known RBP	5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	GIGYF2	Q6Y7W6	1299 aa	Known RBP	5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	NUTM1	Q86Y26	1132 aa		5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	CLASRP	Q8N2M8	674 aa	Known RBP	5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	PI4K2B	Q8TCG2	481 aa		5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	JARID2	Q92833	1246 aa	Predicted RBP	5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	PA2G4	Q9UQ80	394 aa	Known RBP	5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	ZBTB1	Q9Y2K1	713 aa		5.51	□□□□□ -1.53
ATP2C1-223	ENST00000515854	TTC41P	Q6P2S7	1318 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	THSD7A	Q9UPZ6	1657 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	ATRN	O75882	1429 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	LOC102724428	A0A0B4J2F2	783 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	KCNQ2	O43526	872 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	ATP6V1A	P38606	617 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	PTPN5	P54829	565 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	SIK1	P57059	783 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	OS9	Q13438	667 aa	Predicted RBP	5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	ITPK1	Q13572	414 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	HLF	Q16534	295 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	POTEE	Q6S8J3	1075 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	CASC1	Q6TDU7	716 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	LMBR1L	Q6UX01	489 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	GJD4	Q96KN9	370 aa	Predicted RBP	5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	PLA2G12B	Q9BX93	195 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	BCL11A	Q9H165	835 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	CCDC87	Q9NVE4	849 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	PALLD	Q8WX93	1383 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	ZNF831	Q5JPB2	1677 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	RREB1	Q92766	1687 aa		5.5	□□□□□ -1.53
ATP2C1-223	ENST00000515854	AFF2	P51816	1311 aa		5.49	□□□□□ -1.53
ATP2C1-223	ENST00000515854	CDHR2	Q9BYE9	1310 aa		5.49	□□□□□ -1.53
ATP2C1-223	ENST00000515854	CSF1R	P07333	972 aa		5.49	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms