RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	CRTC2	Q53ET0	693 aa	Predicted RBP	5.18	□□□□□ -1.58
SLC38A9-223	ENST00000515629	GLYCTK	Q8IVS8	523 aa		5.18	□□□□□ -1.58
SLC38A9-223	ENST00000515629	MUC3B	Q9H195	1237 aa		5.18	□□□□□ -1.58
SLC38A9-223	ENST00000515629	NUP155	O75694	1391 aa		5.18	□□□□□ -1.58
SLC38A9-223	ENST00000515629	TRPM2	O94759	1503 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	TTLL13P	A6NNM8	815 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	ENPP3	O14638	875 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	ATP9B	O43861	1147 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	VIL1	P09327	827 aa	Known RBP	5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	FAM161A	Q3B820	660 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	MCF2L2	Q86YR7	1114 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	STAC3	Q96MF2	364 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	MRS2	Q9HD23	443 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	CASS4	Q9NQ75	786 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	AFF2	P51816	1311 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	DCC	P43146	1447 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	MST1R	Q04912	1400 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	SETD5	Q9C0A6	1442 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	ZRSR2	Q15696	482 aa	Known RBP	5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	NFE2L2	Q16236	605 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	KANK3	Q6NY19	840 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	POTEG	Q6S5H5	508 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	DDX12P	Q92771	950 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	DDX17	Q92841	729 aa	Known RBP	5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	CEP89	Q96ST8	783 aa		5.17	□□□□□ -1.58
SLC38A9-223	ENST00000515629	ASXL1	Q8IXJ9	1541 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	MET	P08581	1390 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	ROCK1	Q13464	1354 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	PPP1R12A	O14974	1030 aa	Predicted RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	HIP1R	O75146	1068 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	KRT18	P05783	430 aa	Known RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	ZNF76	P36508	570 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	PRIM1	P49642	420 aa	Known RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	MTMR3	Q13615	1198 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	DSG2	Q14126	1118 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	ZNF394	Q53GI3	561 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	LRRC59	Q96AG4	307 aa	Known RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	L3MBTL3	Q96JM7	780 aa	Predicted RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	RNPC3	Q96LT9	517 aa	Known RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	DCTN4	Q9UJW0	460 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	IQGAP3	Q86VI3	1631 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	CDK12	Q9NYV4	1490 aa	Predicted RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	KIF3C	O14782	793 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	LZTS3	O60299	673 aa	Predicted RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	ITGAE	P38570	1179 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	RAPGEF1	Q13905	1077 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	LRRC41	Q15345	812 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	MAPRE1	Q15691	268 aa	Known RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	RIC3	Q7Z5B4	369 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	PPM1E	Q8WY54	764 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	RUNDC1	Q96C34	613 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	NRXN3	Q9Y4C0	1643 aa		5.16	□□□□□ -1.58
SLC38A9-223	ENST00000515629	XRN1	Q8IZH2	1706 aa	Known RBP	5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	PIK3CD	O00329	1044 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	FAM160A1	Q05DH4	1040 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	SIM2	Q14190	667 aa	Predicted RBP	5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	SETDB1	Q15047	1291 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	C1QTNF12	Q5T7M4	302 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	SOGA3	Q5TF21	947 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	SKAP1	Q86WV1	359 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	HSCB	Q8IWL3	235 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	DEPDC4	Q8N2C3	294 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	FRMD6	Q96NE9	622 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	MYCBP	Q99417	103 aa	Predicted RBP	5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	APBA2	Q99767	749 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	HDAC9	Q9UKV0	1011 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	SETBP1	Q9Y6X0	1596 aa		5.15	□□□□□ -1.58
SLC38A9-223	ENST00000515629	PNPLA6	Q8IY17	1366 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	BPNT1	O95861	308 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	POTEI	P0CG38	1075 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	RBM6	P78332	1123 aa	Known RBP	5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	TOMM20	Q15388	145 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	MICALL2	Q8IY33	904 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PGBD3	Q8N328	593 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SVIP	Q8NHG7	77 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	RSPH1	Q8WYR4	309 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	KANSL2	Q9H9L4	492 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	BMP2K	Q9NSY1	1161 aa	Predicted RBP	5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	RGS12	O14924	1447 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ADGRL3	Q9HAR2	1447 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	NHSL1	Q5SYE7	1610 aa		5.15	□□□□□ -1.59
SLC38A9-223	ENST00000515629	TBX3	O15119	743 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	NEXN	Q0ZGT2	675 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ARNT2	Q9HBZ2	717 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PTPRH	Q9HD43	1115 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	HOMER2	Q9NSB8	354 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	EP400	Q96L91	3159 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CCDC85C	A6NKD9	419 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	RNASEH2A	O75792	299 aa	Known RBP	5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ADAMTS2	O95450	1211 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CDC27	P30260	824 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PTGER2	P43116	358 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SUGP1	Q8IWZ8	645 aa	Known RBP	5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SAMD3	Q8N6K7	520 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CLP1	Q92989	425 aa	Known RBP	5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms