RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 TTC5Q8N0Z6 440 aa11.99□□□□□ -0.49
CDC42SE2-212ENST00000515533 MTRQ99707 1265 aa11.99□□□□□ -0.49
CDC42SE2-212ENST00000515533 NMRK2Q9NPI5 230 aa11.99□□□□□ -0.49
CDC42SE2-212ENST00000515533 SCN7AQ01118 1682 aa11.99□□□□□ -0.49
CDC42SE2-212ENST00000515533 ANKRD31Q8N7Z5 1873 aa11.99□□□□□ -0.49
CDC42SE2-212ENST00000515533 KDM2BQ8NHM5 1336 aa11.98□□□□□ -0.49
CDC42SE2-212ENST00000515533 C3orf80F5H4A9 247 aa11.98□□□□□ -0.49
CDC42SE2-212ENST00000515533 TM4SF1P30408 202 aa11.98□□□□□ -0.49
CDC42SE2-212ENST00000515533 IL21Q9HBE4 155 aa11.98□□□□□ -0.49
CDC42SE2-212ENST00000515533 RNF181Q9P0P0 153 aa11.98□□□□□ -0.49
CDC42SE2-212ENST00000515533 NARFQ9UHQ1 456 aa11.98□□□□□ -0.49
CDC42SE2-212ENST00000515533 ZBTB1Q9Y2K1 713 aa11.98□□□□□ -0.49
CDC42SE2-212ENST00000515533 CNGB1Q14028 1251 aaPredicted RBP11.97□□□□□ -0.49
CDC42SE2-212ENST00000515533 FER1L6Q2WGJ9 1857 aa11.96□□□□□ -0.49
CDC42SE2-212ENST00000515533 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
CDC42SE2-212ENST00000515533 PER1O15534 1290 aaPredicted RBP11.96□□□□□ -0.49
CDC42SE2-212ENST00000515533 STARD3NLO95772 234 aa11.96□□□□□ -0.49
CDC42SE2-212ENST00000515533 TEFQ10587 303 aa11.96□□□□□ -0.49
CDC42SE2-212ENST00000515533 NFIXQ14938 502 aa11.96□□□□□ -0.49
CDC42SE2-212ENST00000515533 PPP1R18Q6NYC8 613 aa11.96□□□□□ -0.49
CDC42SE2-212ENST00000515533 TATDN2Q93075 761 aa11.96□□□□□ -0.49
CDC42SE2-212ENST00000515533 BCORQ6W2J9 1755 aa11.96□□□□□ -0.49
CDC42SE2-212ENST00000515533 COL3A1P02461 1466 aaPredicted RBP11.95□□□□□ -0.5
CDC42SE2-212ENST00000515533 COL11A2P13942 1736 aaPredicted RBP11.95□□□□□ -0.5
CDC42SE2-212ENST00000515533 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
CDC42SE2-212ENST00000515533 NRG2O14511 850 aaPredicted RBP11.95□□□□□ -0.5
CDC42SE2-212ENST00000515533 SERPINB2P05120 415 aa11.95□□□□□ -0.5
CDC42SE2-212ENST00000515533 CANXP27824 592 aaKnown RBP11.95□□□□□ -0.5
CDC42SE2-212ENST00000515533 GAS2L2Q8NHY3 880 aa11.95□□□□□ -0.5
CDC42SE2-212ENST00000515533 RBM46Q8TBY0 533 aaKnown RBP11.95□□□□□ -0.5
CDC42SE2-212ENST00000515533 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
CDC42SE2-212ENST00000515533 ARFGEF2Q9Y6D5 1785 aa11.95□□□□□ -0.5
CDC42SE2-212ENST00000515533 NPC1L1Q9UHC9 1359 aa11.94□□□□□ -0.5
CDC42SE2-212ENST00000515533 A0A087WZG4 1122 aa11.94□□□□□ -0.5
CDC42SE2-212ENST00000515533 GNAT3A8MTJ3 354 aa11.94□□□□□ -0.5
CDC42SE2-212ENST00000515533 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
CDC42SE2-212ENST00000515533 ZNF330Q9Y3S2 320 aaPredicted RBP11.94□□□□□ -0.5
CDC42SE2-212ENST00000515533 ZC3H4Q9UPT8 1303 aaKnown RBP11.93□□□□□ -0.5
CDC42SE2-212ENST00000515533 H0YIN7 160 aa11.93□□□□□ -0.5
CDC42SE2-212ENST00000515533 BICDL1Q6ZP65 573 aa11.93□□□□□ -0.5
CDC42SE2-212ENST00000515533 TTLL6Q8N841 843 aa11.93□□□□□ -0.5
CDC42SE2-212ENST00000515533 TEX13AQ9BXU3 409 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE2-212ENST00000515533 V9GY48 417 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE2-212ENST00000515533 DLG5Q8TDM6 1919 aa11.93□□□□□ -0.5
CDC42SE2-212ENST00000515533 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
CDC42SE2-212ENST00000515533 LMNB1P20700 586 aa11.92□□□□□ -0.5
CDC42SE2-212ENST00000515533 EIF5P55010 431 aaKnown RBP11.92□□□□□ -0.5
CDC42SE2-212ENST00000515533 RASSF7Q02833 373 aa11.92□□□□□ -0.5
CDC42SE2-212ENST00000515533 FSTL1Q12841 308 aa11.92□□□□□ -0.5
CDC42SE2-212ENST00000515533 ZNF790Q6PG37 636 aa11.92□□□□□ -0.5
CDC42SE2-212ENST00000515533 C2CD5Q86YS7 1000 aa11.92□□□□□ -0.5
CDC42SE2-212ENST00000515533 ZNF516Q92618 1163 aa11.92□□□□□ -0.5
CDC42SE2-212ENST00000515533 ZNF496Q96IT1 587 aaPredicted RBP11.92□□□□□ -0.5
CDC42SE2-212ENST00000515533 RRAGCQ9HB90 399 aa11.92□□□□□ -0.5
CDC42SE2-212ENST00000515533 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
CDC42SE2-212ENST00000515533 SLX4Q8IY92 1834 aa11.91□□□□□ -0.5
CDC42SE2-212ENST00000515533 NPHP1O15259 732 aa11.91□□□□□ -0.5
CDC42SE2-212ENST00000515533 CFAP53Q96M91 514 aa11.91□□□□□ -0.5
CDC42SE2-212ENST00000515533 FMNL2Q96PY5 1086 aa11.91□□□□□ -0.5
CDC42SE2-212ENST00000515533 GRXCR2A6NFK2 248 aa11.9□□□□□ -0.5
CDC42SE2-212ENST00000515533 IL6STP40189 918 aaPredicted RBP11.9□□□□□ -0.5
CDC42SE2-212ENST00000515533 IL17REQ8NFR9 667 aa11.9□□□□□ -0.5
CDC42SE2-212ENST00000515533 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.5
CDC42SE2-212ENST00000515533 PDZRN3Q9UPQ7 1066 aa11.9□□□□□ -0.5
CDC42SE2-212ENST00000515533 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.51
CDC42SE2-212ENST00000515533 RNF40O75150 1001 aa11.89□□□□□ -0.51
CDC42SE2-212ENST00000515533 PDE6BP35913 854 aa11.89□□□□□ -0.51
CDC42SE2-212ENST00000515533 TBC1D9BQ66K14 1250 aa11.89□□□□□ -0.51
CDC42SE2-212ENST00000515533 NUDT18Q6ZVK8 323 aa11.89□□□□□ -0.51
CDC42SE2-212ENST00000515533 DNAJC5GQ8N7S2 189 aa11.89□□□□□ -0.51
CDC42SE2-212ENST00000515533 SMC1BQ8NDV3 1235 aa11.89□□□□□ -0.51
CDC42SE2-212ENST00000515533 ZNF622Q969S3 477 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDC42SE2-212ENST00000515533 TBC1D2BQ9UPU7 963 aa11.89□□□□□ -0.51
CDC42SE2-212ENST00000515533 CEMIPQ8WUJ3 1361 aa11.89□□□□□ -0.51
CDC42SE2-212ENST00000515533 GLTPD2A6NH11 291 aa11.88□□□□□ -0.51
CDC42SE2-212ENST00000515533 BTBD11A6QL63 1104 aa11.88□□□□□ -0.51
CDC42SE2-212ENST00000515533 PRKAR2BP31323 418 aa11.88□□□□□ -0.51
CDC42SE2-212ENST00000515533 SETDB2Q96T68 719 aa11.88□□□□□ -0.51
CDC42SE2-212ENST00000515533 BRIP1Q9BX63 1249 aa11.88□□□□□ -0.51
CDC42SE2-212ENST00000515533 CDHR5Q9HBB8 845 aa11.88□□□□□ -0.51
CDC42SE2-212ENST00000515533 NUDCQ9Y266 331 aa11.88□□□□□ -0.51
CDC42SE2-212ENST00000515533 ARIH1Q9Y4X5 557 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE2-212ENST00000515533 NUP98P52948 1817 aa11.88□□□□□ -0.51
CDC42SE2-212ENST00000515533 VEGFAP15692 232 aaPredicted RBP11.87□□□□□ -0.51
CDC42SE2-212ENST00000515533 ST5P78524 1137 aa11.87□□□□□ -0.51
CDC42SE2-212ENST00000515533 HTRA3P83110 453 aa11.87□□□□□ -0.51
CDC42SE2-212ENST00000515533 E2F4Q16254 413 aa11.87□□□□□ -0.51
CDC42SE2-212ENST00000515533 PRR5LQ6MZQ0 368 aa11.87□□□□□ -0.51
CDC42SE2-212ENST00000515533 CNBD1Q8NA66 436 aa11.87□□□□□ -0.51
CDC42SE2-212ENST00000515533 RTF1Q92541 710 aaKnown RBP11.87□□□□□ -0.51
CDC42SE2-212ENST00000515533 KLRG1Q96E93 195 aa11.87□□□□□ -0.51
CDC42SE2-212ENST00000515533 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
CDC42SE2-212ENST00000515533 SCN4AP35499 1836 aa11.86□□□□□ -0.51
CDC42SE2-212ENST00000515533 NFKBIEO00221 500 aa11.86□□□□□ -0.51
CDC42SE2-212ENST00000515533 C21orf2O43822 256 aa11.86□□□□□ -0.51
CDC42SE2-212ENST00000515533 A1BGP04217 495 aa11.86□□□□□ -0.51
CDC42SE2-212ENST00000515533 DZIP3Q86Y13 1208 aaKnown RBP11.86□□□□□ -0.51
CDC42SE2-212ENST00000515533 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
CDC42SE2-212ENST00000515533 PHACTR3Q96KR7 559 aa11.86□□□□□ -0.51
CDC42SE2-212ENST00000515533 RSPH6AQ9H0K4 717 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms