RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 KLRG1Q96E93 195 aa17.58■□□□□ 0.4
TCOF1-215ENST00000515516 SNED1Q8TER0 1413 aa17.57■□□□□ 0.4
TCOF1-215ENST00000515516 CCDC88AQ3V6T2 1871 aa17.57■□□□□ 0.4
TCOF1-215ENST00000515516 SF3B3Q15393 1217 aaKnown RBP17.57■□□□□ 0.4
TCOF1-215ENST00000515516 AOC3Q16853 763 aa17.57■□□□□ 0.4
TCOF1-215ENST00000515516 TWISTNBQ3B726 338 aaPredicted RBP17.57■□□□□ 0.4
TCOF1-215ENST00000515516 TSPYL6Q8N831 410 aa17.57■□□□□ 0.4
TCOF1-215ENST00000515516 CCDC191Q8NCU4 936 aa17.57■□□□□ 0.4
TCOF1-215ENST00000515516 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
TCOF1-215ENST00000515516 METTL22Q9BUU2 404 aaPredicted RBP17.56■□□□□ 0.4
TCOF1-215ENST00000515516 RTFDC1Q9BY42 306 aaPredicted RBP17.56■□□□□ 0.4
TCOF1-215ENST00000515516 CWC25Q9NXE8 425 aaPredicted RBP17.56■□□□□ 0.4
TCOF1-215ENST00000515516 DICER1Q9UPY3 1922 aaKnown RBP17.55■□□□□ 0.4
TCOF1-215ENST00000515516 POTEIP0CG38 1075 aa17.55■□□□□ 0.4
TCOF1-215ENST00000515516 POTEJP0CG39 1038 aa17.55■□□□□ 0.4
TCOF1-215ENST00000515516 SLC51AQ86UW1 340 aa17.55■□□□□ 0.4
TCOF1-215ENST00000515516 WDR63Q8IWG1 891 aa17.55■□□□□ 0.4
TCOF1-215ENST00000515516 NEXNQ0ZGT2 675 aa17.54■□□□□ 0.4
TCOF1-215ENST00000515516 KSR2Q6VAB6 950 aa17.54■□□□□ 0.4
TCOF1-215ENST00000515516 FAM9BQ8IZU0 186 aa17.54■□□□□ 0.4
TCOF1-215ENST00000515516 ZNRF3Q9ULT6 936 aa17.54■□□□□ 0.4
TCOF1-215ENST00000515516 MAP3K2Q9Y2U5 619 aa17.54■□□□□ 0.4
TCOF1-215ENST00000515516 CEP350Q5VT06 3117 aa17.54■□□□□ 0.4
TCOF1-215ENST00000515516 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
TCOF1-215ENST00000515516 PCCAP05165 728 aaPredicted RBP17.53■□□□□ 0.4
TCOF1-215ENST00000515516 CCDC152Q4G0S7 254 aa17.53■□□□□ 0.4
TCOF1-215ENST00000515516 NSFL1CQ9UNZ2 370 aaKnown RBP17.53■□□□□ 0.4
TCOF1-215ENST00000515516 PI4KAP2A4QPH2 592 aa17.52■□□□□ 0.4
TCOF1-215ENST00000515516 PDE8AO60658 829 aa17.52■□□□□ 0.4
TCOF1-215ENST00000515516 RPS8P62241 208 aaKnown RBP17.52■□□□□ 0.4
TCOF1-215ENST00000515516 KIAA2012Q0VF49 1180 aa17.52■□□□□ 0.4
TCOF1-215ENST00000515516 PI4KAP1Q8N8J0 262 aa17.52■□□□□ 0.4
TCOF1-215ENST00000515516 CELF1Q92879 486 aaKnown RBP17.52■□□□□ 0.4
TCOF1-215ENST00000515516 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
TCOF1-215ENST00000515516 TNIP1Q15025 636 aa17.51■□□□□ 0.39
TCOF1-215ENST00000515516 CREBZFQ9NS37 354 aa17.51■□□□□ 0.39
TCOF1-215ENST00000515516 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
TCOF1-215ENST00000515516 C6orf229H3BNL8 230 aa17.5■□□□□ 0.39
TCOF1-215ENST00000515516 WASHC4Q2M389 1173 aa17.5■□□□□ 0.39
TCOF1-215ENST00000515516 JMYQ8N9B5 988 aa17.5■□□□□ 0.39
TCOF1-215ENST00000515516 JARID2Q92833 1246 aaPredicted RBP17.5■□□□□ 0.39
TCOF1-215ENST00000515516 EYA3Q99504 573 aa17.5■□□□□ 0.39
TCOF1-215ENST00000515516 EPS15P42566 896 aa17.49■□□□□ 0.39
TCOF1-215ENST00000515516 SCNN1DP51172 638 aa17.49■□□□□ 0.39
TCOF1-215ENST00000515516 CXCL9Q07325 125 aa17.49■□□□□ 0.39
TCOF1-215ENST00000515516 CIAPIN1Q6FI81 312 aa17.49■□□□□ 0.39
TCOF1-215ENST00000515516 USP50Q70EL3 339 aaPredicted RBP17.49■□□□□ 0.39
TCOF1-215ENST00000515516 CNTROBQ8N137 903 aa17.49■□□□□ 0.39
TCOF1-215ENST00000515516 BCL2L13Q9BXK5 485 aa17.49■□□□□ 0.39
TCOF1-215ENST00000515516 MYH16Q9H6N6 1097 aa17.49■□□□□ 0.39
TCOF1-215ENST00000515516 GPSM2P81274 684 aa17.48■□□□□ 0.39
TCOF1-215ENST00000515516 MAP1SQ66K74 1059 aaPredicted RBP17.48■□□□□ 0.39
TCOF1-215ENST00000515516 TMEM88BA6NKF7 163 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 G3V3G9 751 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 RIMBP2O15034 1052 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 RAD17O75943 681 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
TCOF1-215ENST00000515516 FLIIQ13045 1269 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 FKBP5Q13451 457 aaPredicted RBP17.47■□□□□ 0.39
TCOF1-215ENST00000515516 DCAF8Q5TAQ9 597 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 G2E3Q7L622 706 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 CCDC85AQ96PX6 553 aaPredicted RBP17.47■□□□□ 0.39
TCOF1-215ENST00000515516 SEC31BQ9NQW1 1179 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 ADARB2Q9NS39 739 aaKnown RBP17.47■□□□□ 0.39
TCOF1-215ENST00000515516 GPRC5DQ9NZD1 345 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 ANKIB1Q9P2G1 1089 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 COL4A5P29400 1685 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 SCN4AP35499 1836 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 PASKQ96RG2 1323 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
TCOF1-215ENST00000515516 VAMP4O75379 141 aa17.46■□□□□ 0.39
TCOF1-215ENST00000515516 ITGBL1O95965 494 aaPredicted RBP17.46■□□□□ 0.39
TCOF1-215ENST00000515516 IGKV5-2P06315 115 aa17.46■□□□□ 0.39
TCOF1-215ENST00000515516 GMPSP49915 693 aaPredicted RBP17.46■□□□□ 0.39
TCOF1-215ENST00000515516 ANKRD18AQ8IVF6 992 aa17.46■□□□□ 0.39
TCOF1-215ENST00000515516 ZC3H12CQ9C0D7 883 aaKnown RBP17.46■□□□□ 0.39
TCOF1-215ENST00000515516 NEURL1BA8MQ27 555 aa17.45■□□□□ 0.38
TCOF1-215ENST00000515516 CTSWP56202 376 aa17.45■□□□□ 0.38
TCOF1-215ENST00000515516 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
TCOF1-215ENST00000515516 CDC5LQ99459 802 aaKnown RBP17.45■□□□□ 0.38
TCOF1-215ENST00000515516 POLLQ9UGP5 575 aa17.45■□□□□ 0.38
TCOF1-215ENST00000515516 MKRN1Q9UHC7 482 aaKnown RBP17.45■□□□□ 0.38
TCOF1-215ENST00000515516 TBC1D16Q8TBP0 767 aa17.44■□□□□ 0.38
TCOF1-215ENST00000515516 DNAAF4Q8WXU2 420 aa17.44■□□□□ 0.38
TCOF1-215ENST00000515516 DBNDD1Q9H9R9 158 aa17.44■□□□□ 0.38
TCOF1-215ENST00000515516 GGA1Q9UJY5 639 aa17.44■□□□□ 0.38
TCOF1-215ENST00000515516 H7C1D1 291 aa17.43■□□□□ 0.38
TCOF1-215ENST00000515516 UFL1O94874 794 aa17.43■□□□□ 0.38
TCOF1-215ENST00000515516 PODXL2Q9NZ53 605 aa17.43■□□□□ 0.38
TCOF1-215ENST00000515516 YDJCA8MPS7 323 aa17.42■□□□□ 0.38
TCOF1-215ENST00000515516 H7C1W4 665 aa17.42■□□□□ 0.38
TCOF1-215ENST00000515516 GCKRQ14397 625 aa17.42■□□□□ 0.38
TCOF1-215ENST00000515516 DOK7Q18PE1 504 aa17.42■□□□□ 0.38
TCOF1-215ENST00000515516 UBE3BQ7Z3V4 1068 aa17.42■□□□□ 0.38
TCOF1-215ENST00000515516 TTLL11Q8NHH1 800 aa17.42■□□□□ 0.38
TCOF1-215ENST00000515516 CNOT7Q9UIV1 285 aaKnown RBP17.42■□□□□ 0.38
TCOF1-215ENST00000515516 LAMB2P55268 1798 aa17.42■□□□□ 0.38
TCOF1-215ENST00000515516 DDX60Q8IY21 1712 aaKnown RBP17.41■□□□□ 0.38
TCOF1-215ENST00000515516 ECE2O60344 883 aa17.41■□□□□ 0.38
TCOF1-215ENST00000515516 LINS1Q8NG48 757 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms