RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 KIAA2012Q0VF49 1180 aa24.03■■□□□ 1.44
SPOP-220ENST00000515508 GRAPQ13588 217 aa24.03■■□□□ 1.44
SPOP-220ENST00000515508 GRAPLQ8TC17 118 aaPredicted RBP24.03■■□□□ 1.44
SPOP-220ENST00000515508 ADARB2Q9NS39 739 aaKnown RBP24.03■■□□□ 1.44
SPOP-220ENST00000515508 ABT1Q9ULW3 272 aaKnown RBP24.03■■□□□ 1.44
SPOP-220ENST00000515508 CDHR2Q9BYE9 1310 aa24.03■■□□□ 1.44
SPOP-220ENST00000515508 WDR33Q9C0J8 1336 aaKnown RBP24.03■■□□□ 1.44
SPOP-220ENST00000515508 DDX46Q7L014 1031 aaKnown RBP24.02■■□□□ 1.44
SPOP-220ENST00000515508 MPNDQ8N594 471 aa24.02■■□□□ 1.44
SPOP-220ENST00000515508 FMR1Q06787 632 aaKnown RBP eCLIP24.01■■□□□ 1.43
SPOP-220ENST00000515508 HDGFL1Q5TGJ6 251 aa24.01■■□□□ 1.43
SPOP-220ENST00000515508 PLBD2Q8NHP8 589 aa24.01■■□□□ 1.43
SPOP-220ENST00000515508 DDX10Q13206 875 aaKnown RBP24■■□□□ 1.43
SPOP-220ENST00000515508 TMC4Q7Z404 712 aa24■■□□□ 1.43
SPOP-220ENST00000515508 WDR43Q15061 677 aaKnown RBP eCLIP23.99■■□□□ 1.43
SPOP-220ENST00000515508 DBF4Q9UBU7 674 aaPredicted RBP23.99■■□□□ 1.43
SPOP-220ENST00000515508 LAS1LQ9Y4W2 734 aaKnown RBP23.99■■□□□ 1.43
SPOP-220ENST00000515508 TRAF5O00463 557 aa23.98■■□□□ 1.43
SPOP-220ENST00000515508 GMPSP49915 693 aaPredicted RBP23.98■■□□□ 1.43
SPOP-220ENST00000515508 MAP2K1Q02750 393 aaPredicted RBP23.98■■□□□ 1.43
SPOP-220ENST00000515508 CST9Q5W186 159 aa23.98■■□□□ 1.43
SPOP-220ENST00000515508 CIAPIN1Q6FI81 312 aa23.98■■□□□ 1.43
SPOP-220ENST00000515508 ANKRD13DQ6ZTN6 518 aa23.98■■□□□ 1.43
SPOP-220ENST00000515508 ISCA1Q9BUE6 129 aa23.98■■□□□ 1.43
SPOP-220ENST00000515508 COL4A1P02462 1669 aa23.97■■□□□ 1.43
SPOP-220ENST00000515508 LBX1P52954 281 aa23.97■■□□□ 1.43
SPOP-220ENST00000515508 CFAP44Q96MT7 982 aa23.97■■□□□ 1.43
SPOP-220ENST00000515508 ADAMTS8Q9UP79 889 aa23.97■■□□□ 1.43
SPOP-220ENST00000515508 HSPA8P11142 646 aaKnown RBP23.96■■□□□ 1.43
SPOP-220ENST00000515508 CAPNS2Q96L46 248 aa23.96■■□□□ 1.43
SPOP-220ENST00000515508 PGAP2Q9UHJ9 254 aa23.96■■□□□ 1.43
SPOP-220ENST00000515508 TLL2Q9Y6L7 1015 aa23.96■■□□□ 1.43
SPOP-220ENST00000515508 RAD17O75943 681 aa23.95■■□□□ 1.42
SPOP-220ENST00000515508 ECE1P42892 770 aa23.95■■□□□ 1.42
SPOP-220ENST00000515508 TNIP1Q15025 636 aa23.95■■□□□ 1.42
SPOP-220ENST00000515508 SF3B3Q15393 1217 aaKnown RBP23.95■■□□□ 1.42
SPOP-220ENST00000515508 YDJCA8MPS7 323 aa23.94■■□□□ 1.42
SPOP-220ENST00000515508 HYPKQ9NX55 129 aa23.94■■□□□ 1.42
SPOP-220ENST00000515508 DUSP27Q5VZP5 1158 aa23.93■■□□□ 1.42
SPOP-220ENST00000515508 ZC3H15Q8WU90 426 aaKnown RBP23.93■■□□□ 1.42
SPOP-220ENST00000515508 ZNF428Q96B54 188 aa23.93■■□□□ 1.42
SPOP-220ENST00000515508 FAM89AQ96GI7 184 aa23.93■■□□□ 1.42
SPOP-220ENST00000515508 BCL2L13Q9BXK5 485 aa23.93■■□□□ 1.42
SPOP-220ENST00000515508 ATP5J2-PTCD1G3V325 749 aa23.92■■□□□ 1.42
SPOP-220ENST00000515508 TRIM28Q13263 835 aaKnown RBP23.92■■□□□ 1.42
SPOP-220ENST00000515508 CYP4F22Q6NT55 531 aa23.92■■□□□ 1.42
SPOP-220ENST00000515508 CELF1Q92879 486 aaKnown RBP23.92■■□□□ 1.42
SPOP-220ENST00000515508 MBIPQ9NS73 344 aa23.92■■□□□ 1.42
SPOP-220ENST00000515508 ZNF853P0CG23 659 aa23.91■■□□□ 1.42
SPOP-220ENST00000515508 HIRAP54198 1017 aaPredicted RBP23.91■■□□□ 1.42
SPOP-220ENST00000515508 PAXIP1Q6ZW49 1069 aaPredicted RBP23.91■■□□□ 1.42
SPOP-220ENST00000515508 GPR101Q96P66 508 aaPredicted RBP23.91■■□□□ 1.42
SPOP-220ENST00000515508 GLIS2Q9BZE0 524 aaPredicted RBP23.91■■□□□ 1.42
SPOP-220ENST00000515508 SAPCD2Q86UD0 394 aa23.9■■□□□ 1.42
SPOP-220ENST00000515508 TRPM4Q8TD43 1214 aa23.9■■□□□ 1.42
SPOP-220ENST00000515508 CELF2O95319 508 aaKnown RBP23.89■■□□□ 1.41
SPOP-220ENST00000515508 WASHC4Q2M389 1173 aa23.89■■□□□ 1.41
SPOP-220ENST00000515508 HHIPL1Q96JK4 782 aa23.89■■□□□ 1.41
SPOP-220ENST00000515508 CNOT7Q9UIV1 285 aaKnown RBP23.89■■□□□ 1.41
SPOP-220ENST00000515508 IRS4O14654 1257 aaPredicted RBP23.88■■□□□ 1.41
SPOP-220ENST00000515508 DPF2Q92785 391 aa23.88■■□□□ 1.41
SPOP-220ENST00000515508 PRKRIP1Q9H875 184 aaPredicted RBP23.88■■□□□ 1.41
SPOP-220ENST00000515508 NSFL1CQ9UNZ2 370 aaKnown RBP23.88■■□□□ 1.41
SPOP-220ENST00000515508 SHTN1A0MZ66 631 aa23.87■■□□□ 1.41
SPOP-220ENST00000515508 MAP2K2P36507 400 aa23.87■■□□□ 1.41
SPOP-220ENST00000515508 MICALL2Q8IY33 904 aa23.87■■□□□ 1.41
SPOP-220ENST00000515508 IFT57Q9NWB7 429 aa23.87■■□□□ 1.41
SPOP-220ENST00000515508 POLLQ9UGP5 575 aa23.87■■□□□ 1.41
SPOP-220ENST00000515508 H7C1D1 291 aa23.86■■□□□ 1.41
SPOP-220ENST00000515508 PSMD14O00487 310 aa23.86■■□□□ 1.41
SPOP-220ENST00000515508 GPSM2P81274 684 aa23.86■■□□□ 1.41
SPOP-220ENST00000515508 GRM1Q13255 1194 aa23.86■■□□□ 1.41
SPOP-220ENST00000515508 CDC37L1Q7L3B6 337 aa23.86■■□□□ 1.41
SPOP-220ENST00000515508 BEGAINQ9BUH8 593 aa23.86■■□□□ 1.41
SPOP-220ENST00000515508 DBNDD1Q9H9R9 158 aa23.86■■□□□ 1.41
SPOP-220ENST00000515508 SCN9AQ15858 1988 aa23.85■■□□□ 1.41
SPOP-220ENST00000515508 GOLGA2Q08379 1002 aa23.85■■□□□ 1.41
SPOP-220ENST00000515508 RTL5Q5HYW3 569 aaPredicted RBP23.85■■□□□ 1.41
SPOP-220ENST00000515508 ZBTB38Q8NAP3 1195 aaPredicted RBP23.85■■□□□ 1.41
SPOP-220ENST00000515508 ZBTB12Q9Y330 459 aaPredicted RBP23.85■■□□□ 1.41
SPOP-220ENST00000515508 RTL9Q8NET4 1388 aa23.84■■□□□ 1.41
SPOP-220ENST00000515508 C6orf229H3BNL8 230 aa23.84■■□□□ 1.41
SPOP-220ENST00000515508 AOC2O75106 756 aa23.84■■□□□ 1.41
SPOP-220ENST00000515508 RPS12P25398 132 aaKnown RBP23.84■■□□□ 1.41
SPOP-220ENST00000515508 GNAI1P63096 354 aa23.84■■□□□ 1.41
SPOP-220ENST00000515508 CALD1Q05682 793 aaKnown RBP23.84■■□□□ 1.41
SPOP-220ENST00000515508 RIC3Q7Z5B4 369 aa23.84■■□□□ 1.41
SPOP-220ENST00000515508 EYA3Q99504 573 aa23.84■■□□□ 1.41
SPOP-220ENST00000515508 PHAXQ9H814 394 aaKnown RBP23.84■■□□□ 1.41
SPOP-220ENST00000515508 PSME4Q14997 1843 aa23.83■■□□□ 1.41
SPOP-220ENST00000515508 APAF1O14727 1248 aa23.83■■□□□ 1.41
SPOP-220ENST00000515508 ECE2O60344 883 aa23.83■■□□□ 1.41
SPOP-220ENST00000515508 RPS8P62241 208 aaKnown RBP23.83■■□□□ 1.41
SPOP-220ENST00000515508 TBC1D16Q8TBP0 767 aa23.83■■□□□ 1.41
SPOP-220ENST00000515508 PODXL2Q9NZ53 605 aa23.83■■□□□ 1.41
SPOP-220ENST00000515508 RIMBP2O15034 1052 aa23.82■■□□□ 1.4
SPOP-220ENST00000515508 HSP90B1P14625 803 aaKnown RBP23.82■■□□□ 1.4
SPOP-220ENST00000515508 SAMD7Q7Z3H4 446 aa23.81■■□□□ 1.4
SPOP-220ENST00000515508 CCDC191Q8NCU4 936 aa23.81■■□□□ 1.4
SPOP-220ENST00000515508 ABHD8Q96I13 439 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms