RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-221ENST00000515056 CLEC17AQ6ZS10 378 aa17.79■□□□□ 0.44
APBB3-221ENST00000515056 TNPO1Q92973 898 aaKnown RBP17.79■□□□□ 0.44
APBB3-221ENST00000515056 GRPEL1Q9HAV7 217 aa17.79■□□□□ 0.44
APBB3-221ENST00000515056 SALL3Q9BXA9 1300 aa17.79■□□□□ 0.44
APBB3-221ENST00000515056 NUP98P52948 1817 aa17.79■□□□□ 0.44
APBB3-221ENST00000515056 TERF1P54274 439 aa17.79■□□□□ 0.44
APBB3-221ENST00000515056 LINS1Q8NG48 757 aa17.79■□□□□ 0.44
APBB3-221ENST00000515056 GPTP24298 496 aa17.78■□□□□ 0.44
APBB3-221ENST00000515056 CWF19L2Q2TBE0 894 aaKnown RBP17.78■□□□□ 0.44
APBB3-221ENST00000515056 ZNF34Q8IZ26 560 aa17.78■□□□□ 0.44
APBB3-221ENST00000515056 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
APBB3-221ENST00000515056 SRCIN1Q9C0H9 1055 aa17.78■□□□□ 0.44
APBB3-221ENST00000515056 C4AP0C0L4 1744 aa17.78■□□□□ 0.44
APBB3-221ENST00000515056 TRIM28Q13263 835 aaKnown RBP17.78■□□□□ 0.44
APBB3-221ENST00000515056 SKOR2Q2VWA4 1001 aaPredicted RBP17.78■□□□□ 0.44
APBB3-221ENST00000515056 TBC1D9BQ66K14 1250 aa17.78■□□□□ 0.44
APBB3-221ENST00000515056 NLGN1Q8N2Q7 840 aa17.78■□□□□ 0.44
APBB3-221ENST00000515056 LRRCC1Q9C099 1032 aa17.78■□□□□ 0.44
APBB3-221ENST00000515056 NIP7Q9Y221 180 aaKnown RBP eCLIP17.78■□□□□ 0.44
APBB3-221ENST00000515056 ERC2O15083 957 aa17.77■□□□□ 0.44
APBB3-221ENST00000515056 BICDL1Q6ZP65 573 aa17.77■□□□□ 0.44
APBB3-221ENST00000515056 IBTKQ9P2D0 1353 aaPredicted RBP17.77■□□□□ 0.43
APBB3-221ENST00000515056 ARFGEF2Q9Y6D5 1785 aa17.77■□□□□ 0.43
APBB3-221ENST00000515056 PSDA5PKW4 1024 aaPredicted RBP17.76■□□□□ 0.43
APBB3-221ENST00000515056 NEURL1BA8MQ27 555 aa17.76■□□□□ 0.43
APBB3-221ENST00000515056 MAP7D2Q96T17 732 aa17.76■□□□□ 0.43
APBB3-221ENST00000515056 SLC16A10Q8TF71 515 aa17.76■□□□□ 0.43
APBB3-221ENST00000515056 SETDB2Q96T68 719 aa17.76■□□□□ 0.43
APBB3-221ENST00000515056 STAP2Q9UGK3 403 aa17.76■□□□□ 0.43
APBB3-221ENST00000515056 QSER1Q2KHR3 1735 aa17.75■□□□□ 0.43
APBB3-221ENST00000515056 APBB1O00213 710 aa17.75■□□□□ 0.43
APBB3-221ENST00000515056 ALDH1L1O75891 902 aa17.75■□□□□ 0.43
APBB3-221ENST00000515056 TM4SF1P30408 202 aa17.75■□□□□ 0.43
APBB3-221ENST00000515056 NFIXQ14938 502 aa17.75■□□□□ 0.43
APBB3-221ENST00000515056 NLRP10Q86W26 655 aa17.75■□□□□ 0.43
APBB3-221ENST00000515056 CCDC191Q8NCU4 936 aa17.75■□□□□ 0.43
APBB3-221ENST00000515056 AOX1Q06278 1338 aa17.75■□□□□ 0.43
APBB3-221ENST00000515056 RBM10P98175 930 aaKnown RBP17.75■□□□□ 0.43
APBB3-221ENST00000515056 USP44Q9H0E7 712 aa17.75■□□□□ 0.43
APBB3-221ENST00000515056 UBN2Q6ZU65 1347 aa17.74■□□□□ 0.43
APBB3-221ENST00000515056 GCKRQ14397 625 aa17.74■□□□□ 0.43
APBB3-221ENST00000515056 CWC25Q9NXE8 425 aaPredicted RBP17.74■□□□□ 0.43
APBB3-221ENST00000515056 BCORQ6W2J9 1755 aa17.73■□□□□ 0.43
APBB3-221ENST00000515056 PNMA6EA0A0J9YXQ4 647 aa17.73■□□□□ 0.43
APBB3-221ENST00000515056 ST18O60284 1047 aa17.73■□□□□ 0.43
APBB3-221ENST00000515056 SUSD4Q5VX71 490 aa17.73■□□□□ 0.43
APBB3-221ENST00000515056 MSL1Q68DK7 614 aa17.73■□□□□ 0.43
APBB3-221ENST00000515056 SSH3Q8TE77 659 aa17.73■□□□□ 0.43
APBB3-221ENST00000515056 TRIM44Q96DX7 344 aaPredicted RBP17.73■□□□□ 0.43
APBB3-221ENST00000515056 CWC22Q9HCG8 908 aaKnown RBP17.73■□□□□ 0.43
APBB3-221ENST00000515056 EXOC6BQ9Y2D4 811 aa17.73■□□□□ 0.43
APBB3-221ENST00000515056 RAB11FIP3O75154 756 aa17.73■□□□□ 0.43
APBB3-221ENST00000515056 UBTFL1P0CB47 393 aaPredicted RBP17.73■□□□□ 0.43
APBB3-221ENST00000515056 PARP10Q53GL7 1025 aa17.73■□□□□ 0.43
APBB3-221ENST00000515056 GZF1Q9H116 711 aaPredicted RBP17.73■□□□□ 0.43
APBB3-221ENST00000515056 FAM177BA6PVY3 158 aa17.72■□□□□ 0.43
APBB3-221ENST00000515056 EPB41L2O43491 1005 aaKnown RBP17.72■□□□□ 0.43
APBB3-221ENST00000515056 MX1P20591 662 aa17.72■□□□□ 0.43
APBB3-221ENST00000515056 NUCB2P80303 420 aa17.72■□□□□ 0.43
APBB3-221ENST00000515056 SCN7AQ01118 1682 aa17.72■□□□□ 0.43
APBB3-221ENST00000515056 C9orf78Q9NZ63 289 aaPredicted RBP17.71■□□□□ 0.43
APBB3-221ENST00000515056 LRRFIP2Q9Y608 721 aaKnown RBP17.71■□□□□ 0.43
APBB3-221ENST00000515056 ZBTB7AO95365 584 aa17.71■□□□□ 0.43
APBB3-221ENST00000515056 PPP1R42Q7Z4L9 355 aa17.71■□□□□ 0.43
APBB3-221ENST00000515056 JARID2Q92833 1246 aaPredicted RBP17.71■□□□□ 0.43
APBB3-221ENST00000515056 TRMT112Q9UI30 125 aaKnown RBP17.71■□□□□ 0.43
APBB3-221ENST00000515056 GRM8O00222 908 aa17.7■□□□□ 0.42
APBB3-221ENST00000515056 NBPF7P0C2Y1 421 aaPredicted RBP17.7■□□□□ 0.42
APBB3-221ENST00000515056 POLA2Q14181 598 aa17.7■□□□□ 0.42
APBB3-221ENST00000515056 IL17RAQ96F46 866 aa17.7■□□□□ 0.42
APBB3-221ENST00000515056 UTP14AQ9BVJ6 771 aaKnown RBP17.7■□□□□ 0.42
APBB3-221ENST00000515056 GOLGA6L22H0YM25 854 aa17.7■□□□□ 0.42
APBB3-221ENST00000515056 H7C1W4 665 aa17.7■□□□□ 0.42
APBB3-221ENST00000515056 MMP10P09238 476 aa17.7■□□□□ 0.42
APBB3-221ENST00000515056 DDR1Q08345 913 aa17.7■□□□□ 0.42
APBB3-221ENST00000515056 KIAA1211Q6ZU35 1233 aa17.7■□□□□ 0.42
APBB3-221ENST00000515056 SYNE4Q8N205 404 aa17.7■□□□□ 0.42
APBB3-221ENST00000515056 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
APBB3-221ENST00000515056 FAM89AQ96GI7 184 aa17.7■□□□□ 0.42
APBB3-221ENST00000515056 POLRMTO00411 1230 aaKnown RBP17.69■□□□□ 0.42
APBB3-221ENST00000515056 OFD1O75665 1012 aa17.69■□□□□ 0.42
APBB3-221ENST00000515056 SERPINB2P05120 415 aa17.69■□□□□ 0.42
APBB3-221ENST00000515056 TPTE2Q6XPS3 522 aa17.69■□□□□ 0.42
APBB3-221ENST00000515056 NBPF5PQ86XG9 351 aaPredicted RBP17.69■□□□□ 0.42
APBB3-221ENST00000515056 ESYT1Q9BSJ8 1104 aa17.69■□□□□ 0.42
APBB3-221ENST00000515056 MTFR1LQ9H019 292 aa17.69■□□□□ 0.42
APBB3-221ENST00000515056 ATF5Q9Y2D1 282 aaPredicted RBP17.69■□□□□ 0.42
APBB3-221ENST00000515056 ANKRD36CQ5JPF3 1778 aa17.69■□□□□ 0.42
APBB3-221ENST00000515056 NTSR2O95665 410 aa17.68■□□□□ 0.42
APBB3-221ENST00000515056 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
APBB3-221ENST00000515056 MCM2P49736 904 aa17.68■□□□□ 0.42
APBB3-221ENST00000515056 ANAPC15P60006 121 aa17.68■□□□□ 0.42
APBB3-221ENST00000515056 CARMIL3Q8ND23 1372 aa17.68■□□□□ 0.42
APBB3-221ENST00000515056 CYP2E1P05181 493 aaPredicted RBP17.68■□□□□ 0.42
APBB3-221ENST00000515056 UBE3BQ7Z3V4 1068 aa17.68■□□□□ 0.42
APBB3-221ENST00000515056 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
APBB3-221ENST00000515056 PARP3Q9Y6F1 533 aa17.68■□□□□ 0.42
APBB3-221ENST00000515056 AFDNP55196 1824 aaKnown RBP17.67■□□□□ 0.42
APBB3-221ENST00000515056 UTYO14607 1347 aa17.67■□□□□ 0.42
APBB3-221ENST00000515056 GTF2E1P29083 439 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms