RNA–Protein interactions for RNA: ENST00000514967.5

PROM1-218, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-218ENST00000514967 SUCLG2Q96I99 432 aa20.34■□□□□ 0.85
PROM1-218ENST00000514967 FHDC1Q9C0D6 1143 aaPredicted RBP20.34■□□□□ 0.85
PROM1-218ENST00000514967 ZBTB40Q9NUA8 1239 aa20.34■□□□□ 0.85
PROM1-218ENST00000514967 COG6Q9Y2V7 657 aa20.34■□□□□ 0.85
PROM1-218ENST00000514967 DLEC1Q9Y238 1755 aa20.34■□□□□ 0.85
PROM1-218ENST00000514967 TNRC6CQ9HCJ0 1690 aaKnown RBP20.33■□□□□ 0.85
PROM1-218ENST00000514967 C2CD5Q86YS7 1000 aa20.33■□□□□ 0.85
PROM1-218ENST00000514967 CNKSR1Q969H4 720 aa20.33■□□□□ 0.85
PROM1-218ENST00000514967 RTL5Q5HYW3 569 aaPredicted RBP20.32■□□□□ 0.84
PROM1-218ENST00000514967 TMC4Q7Z404 712 aa20.32■□□□□ 0.84
PROM1-218ENST00000514967 RBM17Q96I25 401 aaKnown RBP20.32■□□□□ 0.84
PROM1-218ENST00000514967 C3orf67Q6ZVT6 689 aa20.31■□□□□ 0.84
PROM1-218ENST00000514967 CCDC24Q8N4L8 307 aa20.31■□□□□ 0.84
PROM1-218ENST00000514967 ANKRD44Q8N8A2 993 aa20.31■□□□□ 0.84
PROM1-218ENST00000514967 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
PROM1-218ENST00000514967 BBOX1O75936 387 aa20.3■□□□□ 0.84
PROM1-218ENST00000514967 DPEP1P16444 411 aa20.3■□□□□ 0.84
PROM1-218ENST00000514967 EPHA10Q5JZY3 1008 aa20.3■□□□□ 0.84
PROM1-218ENST00000514967 DDX46Q7L014 1031 aaKnown RBP20.3■□□□□ 0.84
PROM1-218ENST00000514967 RPGRQ92834 1020 aaKnown RBP20.3■□□□□ 0.84
PROM1-218ENST00000514967 BICC1Q9H694 974 aaKnown RBP20.3■□□□□ 0.84
PROM1-218ENST00000514967 PIM2Q9P1W9 311 aa20.3■□□□□ 0.84
PROM1-218ENST00000514967 LMBR1LQ6UX01 489 aa20.29■□□□□ 0.84
PROM1-218ENST00000514967 LRRFIP2Q9Y608 721 aaKnown RBP20.29■□□□□ 0.84
PROM1-218ENST00000514967 COL11A2P13942 1736 aaPredicted RBP20.29■□□□□ 0.84
PROM1-218ENST00000514967 BRCA1P38398 1863 aaKnown RBP20.28■□□□□ 0.84
PROM1-218ENST00000514967 GRAPQ13588 217 aa20.28■□□□□ 0.84
PROM1-218ENST00000514967 GRIPAP1Q4V328 841 aa20.28■□□□□ 0.84
PROM1-218ENST00000514967 RPAP2Q8IXW5 612 aaPredicted RBP20.28■□□□□ 0.84
PROM1-218ENST00000514967 TTLL6Q8N841 843 aa20.28■□□□□ 0.84
PROM1-218ENST00000514967 GRAPLQ8TC17 118 aaPredicted RBP20.28■□□□□ 0.84
PROM1-218ENST00000514967 CDC5LQ99459 802 aaKnown RBP20.28■□□□□ 0.84
PROM1-218ENST00000514967 FBXO3Q9UK99 471 aa20.28■□□□□ 0.84
PROM1-218ENST00000514967 A0A0G2JLW4 131 aa20.27■□□□□ 0.84
PROM1-218ENST00000514967 CHRNA5P30532 468 aa20.27■□□□□ 0.84
PROM1-218ENST00000514967 RPS8P62241 208 aaKnown RBP20.26■□□□□ 0.83
PROM1-218ENST00000514967 ATP8B2P98198 1209 aa20.26■□□□□ 0.83
PROM1-218ENST00000514967 IFIT5Q13325 482 aaKnown RBP20.26■□□□□ 0.83
PROM1-218ENST00000514967 CCDC57Q2TAC2 916 aa20.26■□□□□ 0.83
PROM1-218ENST00000514967 CC2D2BQ6DHV5 1058 aa20.26■□□□□ 0.83
PROM1-218ENST00000514967 NLGN2Q8NFZ4 835 aa20.26■□□□□ 0.83
PROM1-218ENST00000514967 GREM2Q9H772 168 aa20.26■□□□□ 0.83
PROM1-218ENST00000514967 ANKRD18BA2A2Z9 1011 aa20.25■□□□□ 0.83
PROM1-218ENST00000514967 ITGA6P23229 1130 aa20.25■□□□□ 0.83
PROM1-218ENST00000514967 C7orf43Q8WVR3 580 aa20.25■□□□□ 0.83
PROM1-218ENST00000514967 CRBNQ96SW2 442 aa20.25■□□□□ 0.83
PROM1-218ENST00000514967 FAM161AQ3B820 660 aa20.24■□□□□ 0.83
PROM1-218ENST00000514967 DALRD3Q5D0E6 543 aaKnown RBP20.24■□□□□ 0.83
PROM1-218ENST00000514967 SOGA3Q5TF21 947 aa20.24■□□□□ 0.83
PROM1-218ENST00000514967 SSH3Q8TE77 659 aa20.24■□□□□ 0.83
PROM1-218ENST00000514967 ZNF622Q969S3 477 aaKnown RBP eCLIP20.24■□□□□ 0.83
PROM1-218ENST00000514967 BSDC1Q9NW68 430 aaPredicted RBP20.24■□□□□ 0.83
PROM1-218ENST00000514967 SRCAPQ6ZRS2 3230 aa20.24■□□□□ 0.83
PROM1-218ENST00000514967 RFX5P48382 616 aaPredicted RBP20.23■□□□□ 0.83
PROM1-218ENST00000514967 POLA2Q14181 598 aa20.23■□□□□ 0.83
PROM1-218ENST00000514967 SP8Q8IXZ3 490 aa20.23■□□□□ 0.83
PROM1-218ENST00000514967 COPRSQ9NQ92 184 aa20.23■□□□□ 0.83
PROM1-218ENST00000514967 PRPF40BQ6NWY9 871 aaKnown RBP20.22■□□□□ 0.83
PROM1-218ENST00000514967 CEP85Q6P2H3 762 aa20.22■□□□□ 0.83
PROM1-218ENST00000514967 ANKRD18AQ8IVF6 992 aa20.22■□□□□ 0.83
PROM1-218ENST00000514967 KLHL34Q8N239 644 aa20.22■□□□□ 0.83
PROM1-218ENST00000514967 SEC31BQ9NQW1 1179 aa20.22■□□□□ 0.83
PROM1-218ENST00000514967 ATP6V0A2Q9Y487 856 aa20.22■□□□□ 0.83
PROM1-218ENST00000514967 IGHMBP2P38935 993 aaKnown RBP20.21■□□□□ 0.83
PROM1-218ENST00000514967 CELF1Q92879 486 aaKnown RBP20.21■□□□□ 0.83
PROM1-218ENST00000514967 ARFGEF1Q9Y6D6 1849 aa20.2■□□□□ 0.82
PROM1-218ENST00000514967 SRGAP3O43295 1099 aa20.2■□□□□ 0.82
PROM1-218ENST00000514967 CIAO1O76071 339 aa20.2■□□□□ 0.82
PROM1-218ENST00000514967 PTPN12Q05209 780 aaKnown RBP20.2■□□□□ 0.82
PROM1-218ENST00000514967 SLX4Q8IY92 1834 aa20.19■□□□□ 0.82
PROM1-218ENST00000514967 PPEF1O14829 653 aaPredicted RBP20.19■□□□□ 0.82
PROM1-218ENST00000514967 HMMRO75330 724 aa20.19■□□□□ 0.82
PROM1-218ENST00000514967 ERICH6BQ5W0A0 696 aa20.19■□□□□ 0.82
PROM1-218ENST00000514967 NOP58Q9Y2X3 529 aaKnown RBP20.19■□□□□ 0.82
PROM1-218ENST00000514967 LRRC37AA6NMS7 1700 aa20.19■□□□□ 0.82
PROM1-218ENST00000514967 SNED1Q8TER0 1413 aa20.19■□□□□ 0.82
PROM1-218ENST00000514967 PNMA6EA0A0J9YXQ4 647 aa20.18■□□□□ 0.82
PROM1-218ENST00000514967 MPHOSPH8Q99549 860 aa20.18■□□□□ 0.82
PROM1-218ENST00000514967 PODXL2Q9NZ53 605 aa20.18■□□□□ 0.82
PROM1-218ENST00000514967 CHMP3Q9Y3E7 222 aa20.18■□□□□ 0.82
PROM1-218ENST00000514967 LDHAL6AQ6ZMR3 332 aa20.17■□□□□ 0.82
PROM1-218ENST00000514967 SIRT2Q8IXJ6 389 aa20.17■□□□□ 0.82
PROM1-218ENST00000514967 RTKN2Q8IZC4 609 aa20.17■□□□□ 0.82
PROM1-218ENST00000514967 EXOC6Q8TAG9 804 aa20.17■□□□□ 0.82
PROM1-218ENST00000514967 TMX4Q9H1E5 349 aaPredicted RBP20.17■□□□□ 0.82
PROM1-218ENST00000514967 RIPOR2Q9Y4F9 1068 aa20.17■□□□□ 0.82
PROM1-218ENST00000514967 TAF7LQ5H9L4 462 aa20.16■□□□□ 0.82
PROM1-218ENST00000514967 CCDC85AQ96PX6 553 aaPredicted RBP20.16■□□□□ 0.82
PROM1-218ENST00000514967 ANKRD2Q9GZV1 360 aa20.16■□□□□ 0.82
PROM1-218ENST00000514967 VPS33BQ9H267 617 aa20.16■□□□□ 0.82
PROM1-218ENST00000514967 C1orf115Q9H7X2 142 aa20.16■□□□□ 0.82
PROM1-218ENST00000514967 MINPP1Q9UNW1 487 aa20.16■□□□□ 0.82
PROM1-218ENST00000514967 LTBP3Q9NS15 1303 aa20.16■□□□□ 0.82
PROM1-218ENST00000514967 EYA2O00167 538 aa20.15■□□□□ 0.82
PROM1-218ENST00000514967 GRIN3BO60391 1043 aa20.15■□□□□ 0.82
PROM1-218ENST00000514967 CCDC93Q567U6 631 aa20.15■□□□□ 0.82
PROM1-218ENST00000514967 RTFDC1Q9BY42 306 aaPredicted RBP20.15■□□□□ 0.82
PROM1-218ENST00000514967 BCS1LQ9Y276 419 aa20.15■□□□□ 0.82
PROM1-218ENST00000514967 MROH5Q6ZUA9 1318 aa20.15■□□□□ 0.82
PROM1-218ENST00000514967 COL4A1P02462 1669 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms