RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 AFDNP55196 1824 aaKnown RBP20.89■□□□□ 0.93
SNX2-213ENST00000514949 TMEM94Q12767 1356 aa20.89■□□□□ 0.93
SNX2-213ENST00000514949 TNS3Q68CZ2 1445 aa20.88■□□□□ 0.93
SNX2-213ENST00000514949 KRT32Q14532 448 aa20.88■□□□□ 0.93
SNX2-213ENST00000514949 PLBD2Q8NHP8 589 aa20.88■□□□□ 0.93
SNX2-213ENST00000514949 FUCA2Q9BTY2 467 aa20.88■□□□□ 0.93
SNX2-213ENST00000514949 DNM1Q05193 864 aaKnown RBP20.87■□□□□ 0.93
SNX2-213ENST00000514949 ZNF589Q86UQ0 364 aaPredicted RBP20.87■□□□□ 0.93
SNX2-213ENST00000514949 ELP1O95163 1332 aa20.87■□□□□ 0.93
SNX2-213ENST00000514949 FIBPO43427 364 aa20.87■□□□□ 0.93
SNX2-213ENST00000514949 TOB2Q14106 344 aaPredicted RBP20.87■□□□□ 0.93
SNX2-213ENST00000514949 NECAB1Q8N987 351 aa20.87■□□□□ 0.93
SNX2-213ENST00000514949 TFCP2Q12800 502 aa20.86■□□□□ 0.93
SNX2-213ENST00000514949 LARP1BQ659C4 914 aaKnown RBP20.86■□□□□ 0.93
SNX2-213ENST00000514949 UBE3BQ7Z3V4 1068 aa20.86■□□□□ 0.93
SNX2-213ENST00000514949 HAUS7Q99871 368 aa20.86■□□□□ 0.93
SNX2-213ENST00000514949 CSB-PGBD3P0DP91 1061 aa20.85■□□□□ 0.93
SNX2-213ENST00000514949 COL9A3Q14050 684 aaPredicted RBP20.84■□□□□ 0.93
SNX2-213ENST00000514949 A0A087WZG4 1122 aa20.84■□□□□ 0.93
SNX2-213ENST00000514949 H7C1W4 665 aa20.84■□□□□ 0.93
SNX2-213ENST00000514949 CABP4P57796 275 aa20.84■□□□□ 0.93
SNX2-213ENST00000514949 TAF6LQ9Y6J9 622 aa20.84■□□□□ 0.93
SNX2-213ENST00000514949 DDX54Q8TDD1 881 aaKnown RBP20.83■□□□□ 0.93
SNX2-213ENST00000514949 GPR108Q9NPR9 543 aa20.83■□□□□ 0.93
SNX2-213ENST00000514949 U3KPZ7 1027 aaPredicted RBP20.83■□□□□ 0.93
SNX2-213ENST00000514949 SPATA31A3Q5VYP0 1347 aa20.83■□□□□ 0.93
SNX2-213ENST00000514949 VPS37CA5D8V6 355 aaPredicted RBP20.83■□□□□ 0.92
SNX2-213ENST00000514949 KRT85P78386 507 aa20.83■□□□□ 0.92
SNX2-213ENST00000514949 CADPS2Q86UW7 1296 aa20.82■□□□□ 0.92
SNX2-213ENST00000514949 EDC3Q96F86 508 aaKnown RBP20.82■□□□□ 0.92
SNX2-213ENST00000514949 STRCP1A6NGW2 1772 aa20.82■□□□□ 0.92
SNX2-213ENST00000514949 FOXO4P98177 505 aa20.81■□□□□ 0.92
SNX2-213ENST00000514949 MCMDC2Q4G0Z9 681 aa20.81■□□□□ 0.92
SNX2-213ENST00000514949 ZNF609O15014 1411 aa20.81■□□□□ 0.92
SNX2-213ENST00000514949 UBR2Q8IWV8 1755 aa20.81■□□□□ 0.92
SNX2-213ENST00000514949 CDC37L1Q7L3B6 337 aa20.81■□□□□ 0.92
SNX2-213ENST00000514949 SH3TC1Q8TE82 1336 aa20.81■□□□□ 0.92
SNX2-213ENST00000514949 DDX17Q92841 729 aaKnown RBP20.81■□□□□ 0.92
SNX2-213ENST00000514949 DBNDD2Q9BQY9 259 aa20.81■□□□□ 0.92
SNX2-213ENST00000514949 PALLDQ8WX93 1383 aa20.8■□□□□ 0.92
SNX2-213ENST00000514949 TTC6Q86TZ1 520 aa20.8■□□□□ 0.92
SNX2-213ENST00000514949 KBTBD3Q8NAB2 608 aa20.8■□□□□ 0.92
SNX2-213ENST00000514949 NEK1Q96PY6 1258 aa20.8■□□□□ 0.92
SNX2-213ENST00000514949 NBPF26B4DH59 902 aa20.8■□□□□ 0.92
SNX2-213ENST00000514949 ATP5J2-PTCD1G3V325 749 aa20.8■□□□□ 0.92
SNX2-213ENST00000514949 PTCD1O75127 700 aaKnown RBP20.8■□□□□ 0.92
SNX2-213ENST00000514949 HCLS1P14317 486 aaPredicted RBP20.8■□□□□ 0.92
SNX2-213ENST00000514949 NBPF14Q5TI25 921 aa20.8■□□□□ 0.92
SNX2-213ENST00000514949 NBPF10Q6P3W6 841 aaKnown RBP20.8■□□□□ 0.92
SNX2-213ENST00000514949 NBPF15Q8N660 670 aa20.8■□□□□ 0.92
SNX2-213ENST00000514949 CABLES1Q8TDN4 633 aa20.8■□□□□ 0.92
SNX2-213ENST00000514949 GTF3C6Q969F1 213 aa20.8■□□□□ 0.92
SNX2-213ENST00000514949 SCAND2PQ9GZW5 306 aaPredicted RBP20.8■□□□□ 0.92
SNX2-213ENST00000514949 NUP188Q5SRE5 1749 aa20.79■□□□□ 0.92
SNX2-213ENST00000514949 RRP9O43818 475 aaKnown RBP20.79■□□□□ 0.92
SNX2-213ENST00000514949 KDM4AO75164 1064 aa20.79■□□□□ 0.92
SNX2-213ENST00000514949 PIP4K2AP48426 406 aaPredicted RBP20.79■□□□□ 0.92
SNX2-213ENST00000514949 CHRNA2Q15822 529 aa20.79■□□□□ 0.92
SNX2-213ENST00000514949 LMBR1LQ6UX01 489 aa20.79■□□□□ 0.92
SNX2-213ENST00000514949 JARID2Q92833 1246 aaPredicted RBP20.79■□□□□ 0.92
SNX2-213ENST00000514949 ATG9AQ7Z3C6 839 aa20.78■□□□□ 0.92
SNX2-213ENST00000514949 ERVV-2B6SEH9 535 aa20.78■□□□□ 0.92
SNX2-213ENST00000514949 ATG3Q9NT62 314 aa20.78■□□□□ 0.92
SNX2-213ENST00000514949 NKX1-1Q15270 411 aaPredicted RBP20.77■□□□□ 0.92
SNX2-213ENST00000514949 GIMAP6Q6P9H5 292 aa20.77■□□□□ 0.92
SNX2-213ENST00000514949 TCEANC2Q96MN5 208 aa20.77■□□□□ 0.92
SNX2-213ENST00000514949 USP25Q9UHP3 1055 aa20.77■□□□□ 0.92
SNX2-213ENST00000514949 PTMAP06454 111 aaKnown RBP20.77■□□□□ 0.91
SNX2-213ENST00000514949 CYP21A2P08686 494 aa20.77■□□□□ 0.91
SNX2-213ENST00000514949 HMGB1P09429 215 aaKnown RBP20.77■□□□□ 0.91
SNX2-213ENST00000514949 HELLSQ9NRZ9 838 aa20.77■□□□□ 0.91
SNX2-213ENST00000514949 CWC25Q9NXE8 425 aaPredicted RBP20.77■□□□□ 0.91
SNX2-213ENST00000514949 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.77■□□□□ 0.91
SNX2-213ENST00000514949 TJP1Q07157 1748 aa20.76■□□□□ 0.91
SNX2-213ENST00000514949 PCDH11XQ9BZA7 1347 aa20.76■□□□□ 0.91
SNX2-213ENST00000514949 PCDH11YQ9BZA8 1340 aa20.76■□□□□ 0.91
SNX2-213ENST00000514949 PAPPAQ13219 1627 aa20.76■□□□□ 0.91
SNX2-213ENST00000514949 ADCY5O95622 1261 aa20.76■□□□□ 0.91
SNX2-213ENST00000514949 IL15P40933 162 aaPredicted RBP20.76■□□□□ 0.91
SNX2-213ENST00000514949 CCDC192P0DO97 292 aa20.75■□□□□ 0.91
SNX2-213ENST00000514949 LLPHQ9BRT6 129 aaKnown RBP20.75■□□□□ 0.91
SNX2-213ENST00000514949 SPEF2Q9C093 1822 aa20.75■□□□□ 0.91
SNX2-213ENST00000514949 KCPQ6ZWJ8 1503 aa20.75■□□□□ 0.91
SNX2-213ENST00000514949 KIAA2012Q0VF49 1180 aa20.75■□□□□ 0.91
SNX2-213ENST00000514949 CCDC191Q8NCU4 936 aa20.75■□□□□ 0.91
SNX2-213ENST00000514949 DNAJC2Q99543 621 aaKnown RBP20.75■□□□□ 0.91
SNX2-213ENST00000514949 DSCC1Q9BVC3 393 aa20.75■□□□□ 0.91
SNX2-213ENST00000514949 WDR17Q8IZU2 1322 aa20.74■□□□□ 0.91
SNX2-213ENST00000514949 DTNBO60941 627 aa20.74■□□□□ 0.91
SNX2-213ENST00000514949 CIAO1O76071 339 aa20.74■□□□□ 0.91
SNX2-213ENST00000514949 RBM43Q6ZSC3 357 aaKnown RBP20.74■□□□□ 0.91
SNX2-213ENST00000514949 FERMT3Q86UX7 667 aa20.74■□□□□ 0.91
SNX2-213ENST00000514949 SMARCC2Q8TAQ2 1214 aa20.74■□□□□ 0.91
SNX2-213ENST00000514949 ZCRB1Q8TBF4 217 aaKnown RBP20.74■□□□□ 0.91
SNX2-213ENST00000514949 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.74■□□□□ 0.91
SNX2-213ENST00000514949 SEC62Q99442 399 aaKnown RBP20.74■□□□□ 0.91
SNX2-213ENST00000514949 AGXT2Q9BYV1 514 aa20.74■□□□□ 0.91
SNX2-213ENST00000514949 Q6ZUG5 572 aa20.73■□□□□ 0.91
SNX2-213ENST00000514949 DDX46Q7L014 1031 aaKnown RBP20.73■□□□□ 0.91
SNX2-213ENST00000514949 ZMYM1Q5SVZ6 1142 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms