RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 EXOC6Q8TAG9 804 aa20.87■□□□□ 0.93
SNCAIP-220ENST00000514497 USP44Q9H0E7 712 aa20.87■□□□□ 0.93
SNCAIP-220ENST00000514497 GRM8O00222 908 aa20.86■□□□□ 0.93
SNCAIP-220ENST00000514497 CWF19L2Q2TBE0 894 aaKnown RBP20.86■□□□□ 0.93
SNCAIP-220ENST00000514497 USPL1Q5W0Q7 1092 aa20.86■□□□□ 0.93
SNCAIP-220ENST00000514497 C9orf78Q9NZ63 289 aaPredicted RBP20.86■□□□□ 0.93
SNCAIP-220ENST00000514497 DLEC1Q9Y238 1755 aa20.86■□□□□ 0.93
SNCAIP-220ENST00000514497 DICER1Q9UPY3 1922 aaKnown RBP20.84■□□□□ 0.93
SNCAIP-220ENST00000514497 POLRMTO00411 1230 aaKnown RBP20.84■□□□□ 0.93
SNCAIP-220ENST00000514497 HSP90B1P14625 803 aaKnown RBP20.84■□□□□ 0.93
SNCAIP-220ENST00000514497 PPP1R42Q7Z4L9 355 aa20.84■□□□□ 0.93
SNCAIP-220ENST00000514497 NLRP10Q86W26 655 aa20.84■□□□□ 0.93
SNCAIP-220ENST00000514497 BCL2L12Q9HB09 334 aa20.84■□□□□ 0.93
SNCAIP-220ENST00000514497 WBP1LQ9NX94 342 aa20.84■□□□□ 0.93
SNCAIP-220ENST00000514497 ATP5J2-PTCD1G3V325 749 aa20.83■□□□□ 0.93
SNCAIP-220ENST00000514497 UBTFL1P0CB47 393 aaPredicted RBP20.83■□□□□ 0.93
SNCAIP-220ENST00000514497 VEGFBP49765 207 aa20.83■□□□□ 0.93
SNCAIP-220ENST00000514497 SETDB2Q96T68 719 aa20.83■□□□□ 0.93
SNCAIP-220ENST00000514497 NIP7Q9Y221 180 aaKnown RBP eCLIP20.83■□□□□ 0.93
SNCAIP-220ENST00000514497 H7C1W4 665 aa20.82■□□□□ 0.92
SNCAIP-220ENST00000514497 GNAI2P04899 355 aa20.82■□□□□ 0.92
SNCAIP-220ENST00000514497 PCCAP05165 728 aaPredicted RBP20.82■□□□□ 0.92
SNCAIP-220ENST00000514497 POTEIP0CG38 1075 aa20.82■□□□□ 0.92
SNCAIP-220ENST00000514497 POTEJP0CG39 1038 aa20.82■□□□□ 0.92
SNCAIP-220ENST00000514497 ZBTB38Q8NAP3 1195 aaPredicted RBP20.82■□□□□ 0.92
SNCAIP-220ENST00000514497 MEIS3Q99687 375 aa20.82■□□□□ 0.92
SNCAIP-220ENST00000514497 CCDC85CA6NKD9 419 aa20.81■□□□□ 0.92
SNCAIP-220ENST00000514497 TTLL6Q8N841 843 aa20.81■□□□□ 0.92
SNCAIP-220ENST00000514497 NYXQ9GZU5 481 aa20.81■□□□□ 0.92
SNCAIP-220ENST00000514497 NFKBIEO00221 500 aa20.8■□□□□ 0.92
SNCAIP-220ENST00000514497 TM4SF1P30408 202 aa20.8■□□□□ 0.92
SNCAIP-220ENST00000514497 PPP4R2Q9NY27 417 aa20.8■□□□□ 0.92
SNCAIP-220ENST00000514497 CDHR2Q9BYE9 1310 aa20.79■□□□□ 0.92
SNCAIP-220ENST00000514497 NBPF7P0C2Y1 421 aaPredicted RBP20.79■□□□□ 0.92
SNCAIP-220ENST00000514497 HSPA8P11142 646 aaKnown RBP20.79■□□□□ 0.92
SNCAIP-220ENST00000514497 GPTP24298 496 aa20.79■□□□□ 0.92
SNCAIP-220ENST00000514497 RGS19P49795 217 aa20.79■□□□□ 0.92
SNCAIP-220ENST00000514497 RPAP2Q8IXW5 612 aaPredicted RBP20.79■□□□□ 0.92
SNCAIP-220ENST00000514497 UTP14AQ9BVJ6 771 aaKnown RBP20.79■□□□□ 0.92
SNCAIP-220ENST00000514497 CARMIL3Q8ND23 1372 aa20.79■□□□□ 0.92
SNCAIP-220ENST00000514497 UBN2Q6ZU65 1347 aa20.78■□□□□ 0.92
SNCAIP-220ENST00000514497 MYH3P11055 1940 aa20.78■□□□□ 0.92
SNCAIP-220ENST00000514497 ERFEQ4G0M1 354 aa20.78■□□□□ 0.92
SNCAIP-220ENST00000514497 TBC1D9BQ66K14 1250 aa20.78■□□□□ 0.92
SNCAIP-220ENST00000514497 TPTE2Q6XPS3 522 aa20.78■□□□□ 0.92
SNCAIP-220ENST00000514497 TRMT112Q9UI30 125 aaKnown RBP20.78■□□□□ 0.92
SNCAIP-220ENST00000514497 GTF3C3Q9Y5Q9 886 aa20.78■□□□□ 0.92
SNCAIP-220ENST00000514497 PASKQ96RG2 1323 aa20.78■□□□□ 0.92
SNCAIP-220ENST00000514497 CASP7P55210 303 aa20.77■□□□□ 0.92
SNCAIP-220ENST00000514497 LAMB2P55268 1798 aa20.77■□□□□ 0.91
SNCAIP-220ENST00000514497 SH3TC1Q8TE82 1336 aa20.77■□□□□ 0.91
SNCAIP-220ENST00000514497 NRXN2Q9P2S2 1712 aa20.76■□□□□ 0.91
SNCAIP-220ENST00000514497 TMEM88BA6NKF7 163 aa20.76■□□□□ 0.91
SNCAIP-220ENST00000514497 SUSD4Q5VX71 490 aa20.76■□□□□ 0.91
SNCAIP-220ENST00000514497 UBE3BQ7Z3V4 1068 aa20.76■□□□□ 0.91
SNCAIP-220ENST00000514497 PLA2G12BQ9BX93 195 aa20.76■□□□□ 0.91
SNCAIP-220ENST00000514497 NFIXQ14938 502 aa20.75■□□□□ 0.91
SNCAIP-220ENST00000514497 FER1L6Q2WGJ9 1857 aa20.75■□□□□ 0.91
SNCAIP-220ENST00000514497 NTSR2O95665 410 aa20.74■□□□□ 0.91
SNCAIP-220ENST00000514497 MTX1Q13505 466 aa20.74■□□□□ 0.91
SNCAIP-220ENST00000514497 SLC10A5Q5PT55 438 aa20.74■□□□□ 0.91
SNCAIP-220ENST00000514497 NBPF5PQ86XG9 351 aaPredicted RBP20.74■□□□□ 0.91
SNCAIP-220ENST00000514497 C2CD5Q86YS7 1000 aa20.74■□□□□ 0.91
SNCAIP-220ENST00000514497 ANKRD44Q8N8A2 993 aa20.74■□□□□ 0.91
SNCAIP-220ENST00000514497 LRRFIP2Q9Y608 721 aaKnown RBP20.74■□□□□ 0.91
SNCAIP-220ENST00000514497 RIC1Q4ADV7 1423 aa20.73■□□□□ 0.91
SNCAIP-220ENST00000514497 HMMRO75330 724 aa20.73■□□□□ 0.91
SNCAIP-220ENST00000514497 DDNO94850 711 aaPredicted RBP20.73■□□□□ 0.91
SNCAIP-220ENST00000514497 LDHDQ86WU2 507 aa20.73■□□□□ 0.91
SNCAIP-220ENST00000514497 SCN4AP35499 1836 aa20.72■□□□□ 0.91
SNCAIP-220ENST00000514497 H0YIN7 160 aa20.72■□□□□ 0.91
SNCAIP-220ENST00000514497 PDE8AO60658 829 aa20.72■□□□□ 0.91
SNCAIP-220ENST00000514497 ATP8B2P98198 1209 aa20.72■□□□□ 0.91
SNCAIP-220ENST00000514497 MAP2K1Q02750 393 aaPredicted RBP20.72■□□□□ 0.91
SNCAIP-220ENST00000514497 HDAC1Q13547 482 aaPredicted RBP20.72■□□□□ 0.91
SNCAIP-220ENST00000514497 RABL6Q3YEC7 729 aaPredicted RBP20.72■□□□□ 0.91
SNCAIP-220ENST00000514497 BICDL1Q6ZP65 573 aa20.72■□□□□ 0.91
SNCAIP-220ENST00000514497 FAM89AQ96GI7 184 aa20.72■□□□□ 0.91
SNCAIP-220ENST00000514497 RWDD1Q9H446 243 aaPredicted RBP20.72■□□□□ 0.91
SNCAIP-220ENST00000514497 DDX60Q8IY21 1712 aaKnown RBP20.71■□□□□ 0.91
SNCAIP-220ENST00000514497 IRS4O14654 1257 aaPredicted RBP20.71■□□□□ 0.91
SNCAIP-220ENST00000514497 GTF2E1P29083 439 aaPredicted RBP20.71■□□□□ 0.91
SNCAIP-220ENST00000514497 CEP85Q6P2H3 762 aa20.71■□□□□ 0.91
SNCAIP-220ENST00000514497 SUCLG2Q96I99 432 aa20.71■□□□□ 0.91
SNCAIP-220ENST00000514497 PCDHB15Q9Y5E8 787 aa20.71■□□□□ 0.91
SNCAIP-220ENST00000514497 IQCA1LA6NCM1 817 aa20.7■□□□□ 0.9
SNCAIP-220ENST00000514497 DEFB115Q30KQ5 88 aa20.7■□□□□ 0.9
SNCAIP-220ENST00000514497 KAZALD1Q96I82 304 aa20.7■□□□□ 0.9
SNCAIP-220ENST00000514497 CCDC136Q96JN2 1154 aa20.7■□□□□ 0.9
SNCAIP-220ENST00000514497 ITGBL1O95965 494 aaPredicted RBP20.69■□□□□ 0.9
SNCAIP-220ENST00000514497 SERPINB2P05120 415 aa20.69■□□□□ 0.9
SNCAIP-220ENST00000514497 FOXO4P98177 505 aa20.69■□□□□ 0.9
SNCAIP-220ENST00000514497 CNBD1Q8NA66 436 aa20.69■□□□□ 0.9
SNCAIP-220ENST00000514497 BICC1Q9H694 974 aaKnown RBP20.69■□□□□ 0.9
SNCAIP-220ENST00000514497 ZNF219Q9P2Y4 722 aaPredicted RBP20.69■□□□□ 0.9
SNCAIP-220ENST00000514497 RASSF10A6NK89 507 aa20.68■□□□□ 0.9
SNCAIP-220ENST00000514497 C21orf2O43822 256 aa20.68■□□□□ 0.9
SNCAIP-220ENST00000514497 CSF1RP07333 972 aa20.68■□□□□ 0.9
SNCAIP-220ENST00000514497 SSH3Q8TE77 659 aa20.68■□□□□ 0.9
SNCAIP-220ENST00000514497 C1orf115Q9H7X2 142 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms