RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ERVV-1B6SEH8 477 aa12.28□□□□□ -0.44
TPM3-221ENST00000513769 ARHGAP33O14559 1287 aa12.28□□□□□ -0.44
TPM3-221ENST00000513769 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
TPM3-221ENST00000513769 ANXA1P04083 346 aa12.28□□□□□ -0.44
TPM3-221ENST00000513769 R3HDM1Q15032 1099 aaKnown RBP12.28□□□□□ -0.44
TPM3-221ENST00000513769 PPP4R3BQ5MIZ7 849 aa12.28□□□□□ -0.44
TPM3-221ENST00000513769 CCDC191Q8NCU4 936 aa12.28□□□□□ -0.44
TPM3-221ENST00000513769 SSH3Q8TE77 659 aa12.28□□□□□ -0.44
TPM3-221ENST00000513769 COL15A1P39059 1388 aa12.28□□□□□ -0.44
TPM3-221ENST00000513769 NEURL1BA8MQ27 555 aa12.27□□□□□ -0.45
TPM3-221ENST00000513769 GRM8O00222 908 aa12.27□□□□□ -0.45
TPM3-221ENST00000513769 GCKRQ14397 625 aa12.27□□□□□ -0.45
TPM3-221ENST00000513769 HSP90AB3PQ58FF7 597 aa12.27□□□□□ -0.45
TPM3-221ENST00000513769 ANKRD45Q5TZF3 282 aa12.27□□□□□ -0.45
TPM3-221ENST00000513769 DNAJC10Q8IXB1 793 aa12.27□□□□□ -0.45
TPM3-221ENST00000513769 TSHZ2Q9NRE2 1034 aa12.27□□□□□ -0.45
TPM3-221ENST00000513769 LRP5O75197 1615 aa12.26□□□□□ -0.45
TPM3-221ENST00000513769 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
TPM3-221ENST00000513769 ITGB4P16144 1822 aa12.26□□□□□ -0.45
TPM3-221ENST00000513769 WNK3Q9BYP7 1800 aa12.26□□□□□ -0.45
TPM3-221ENST00000513769 LOC102724428A0A0B4J2F2 783 aa12.26□□□□□ -0.45
TPM3-221ENST00000513769 NBPF7P0C2Y1 421 aaPredicted RBP12.26□□□□□ -0.45
TPM3-221ENST00000513769 ATP6V1AP38606 617 aa12.26□□□□□ -0.45
TPM3-221ENST00000513769 SIK1P57059 783 aa12.26□□□□□ -0.45
TPM3-221ENST00000513769 TCIRG1Q13488 830 aa12.26□□□□□ -0.45
TPM3-221ENST00000513769 MFSD10Q14728 455 aa12.26□□□□□ -0.45
TPM3-221ENST00000513769 RC3H1Q5TC82 1133 aaKnown RBP12.26□□□□□ -0.45
TPM3-221ENST00000513769 BACH2Q9BYV9 841 aa12.26□□□□□ -0.45
TPM3-221ENST00000513769 H7C1W4 665 aa12.25□□□□□ -0.45
TPM3-221ENST00000513769 IGKV5-2P06315 115 aa12.25□□□□□ -0.45
TPM3-221ENST00000513769 FAM161AQ3B820 660 aa12.25□□□□□ -0.45
TPM3-221ENST00000513769 KIF6Q6ZMV9 814 aa12.25□□□□□ -0.45
TPM3-221ENST00000513769 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
TPM3-221ENST00000513769 BBXQ8WY36 941 aaPredicted RBP12.25□□□□□ -0.45
TPM3-221ENST00000513769 C1orf115Q9H7X2 142 aa12.25□□□□□ -0.45
TPM3-221ENST00000513769 NOP58Q9Y2X3 529 aaKnown RBP12.25□□□□□ -0.45
TPM3-221ENST00000513769 LRRFIP2Q9Y608 721 aaKnown RBP12.25□□□□□ -0.45
TPM3-221ENST00000513769 A0A087WZG4 1122 aa12.24□□□□□ -0.45
TPM3-221ENST00000513769 EZH2Q15910 746 aaKnown RBP12.24□□□□□ -0.45
TPM3-221ENST00000513769 GIGYF2Q6Y7W6 1299 aaKnown RBP12.24□□□□□ -0.45
TPM3-221ENST00000513769 SLC4A9Q96Q91 983 aa12.24□□□□□ -0.45
TPM3-221ENST00000513769 MYD88Q99836 296 aa12.24□□□□□ -0.45
TPM3-221ENST00000513769 TRIM37O94972 964 aa12.23□□□□□ -0.45
TPM3-221ENST00000513769 RGS3P49796 1198 aa12.23□□□□□ -0.45
TPM3-221ENST00000513769 PSEN2P49810 448 aa12.23□□□□□ -0.45
TPM3-221ENST00000513769 EIF5P55010 431 aaKnown RBP12.23□□□□□ -0.45
TPM3-221ENST00000513769 CLEC4GQ6UXB4 293 aa12.23□□□□□ -0.45
TPM3-221ENST00000513769 PPP1R42Q7Z4L9 355 aa12.23□□□□□ -0.45
TPM3-221ENST00000513769 ACSBG1Q96GR2 724 aa12.23□□□□□ -0.45
TPM3-221ENST00000513769 ISCA1Q9BUE6 129 aa12.23□□□□□ -0.45
TPM3-221ENST00000513769 OSBPL3Q9H4L5 887 aa12.23□□□□□ -0.45
TPM3-221ENST00000513769 CWC25Q9NXE8 425 aaPredicted RBP12.23□□□□□ -0.45
TPM3-221ENST00000513769 LAMB4A4D0S4 1761 aa12.23□□□□□ -0.45
TPM3-221ENST00000513769 N4BP2Q86UW6 1770 aaPredicted RBP12.23□□□□□ -0.45
TPM3-221ENST00000513769 MAP3K15Q6ZN16 1313 aa12.22□□□□□ -0.45
TPM3-221ENST00000513769 HSP90B1P14625 803 aaKnown RBP12.22□□□□□ -0.45
TPM3-221ENST00000513769 CWF19L2Q2TBE0 894 aaKnown RBP12.22□□□□□ -0.45
TPM3-221ENST00000513769 INTS5Q6P9B9 1019 aaKnown RBP12.22□□□□□ -0.45
TPM3-221ENST00000513769 ERC1Q8IUD2 1116 aa12.22□□□□□ -0.45
TPM3-221ENST00000513769 CCDC87Q9NVE4 849 aa12.22□□□□□ -0.45
TPM3-221ENST00000513769 RBM19Q9Y4C8 960 aaKnown RBP12.22□□□□□ -0.45
TPM3-221ENST00000513769 TOGARAM1Q9Y4F4 1720 aa12.22□□□□□ -0.45
TPM3-221ENST00000513769 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
TPM3-221ENST00000513769 KAT6BQ8WYB5 2073 aa12.22□□□□□ -0.45
TPM3-221ENST00000513769 SRGAP3O43295 1099 aa12.21□□□□□ -0.45
TPM3-221ENST00000513769 KCNQ2O43526 872 aa12.21□□□□□ -0.45
TPM3-221ENST00000513769 APBA3O96018 575 aa12.21□□□□□ -0.45
TPM3-221ENST00000513769 RABL6Q3YEC7 729 aaPredicted RBP12.21□□□□□ -0.45
TPM3-221ENST00000513769 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
TPM3-221ENST00000513769 ADGRD1Q6QNK2 874 aa12.21□□□□□ -0.45
TPM3-221ENST00000513769 TTLL7Q6ZT98 887 aa12.21□□□□□ -0.45
TPM3-221ENST00000513769 KIF1BPQ96EK5 621 aa12.21□□□□□ -0.45
TPM3-221ENST00000513769 AK7Q96M32 723 aa12.21□□□□□ -0.45
TPM3-221ENST00000513769 LRRCC1Q9C099 1032 aa12.21□□□□□ -0.45
TPM3-221ENST00000513769 C5P01031 1676 aa12.21□□□□□ -0.45
TPM3-221ENST00000513769 PALLDQ8WX93 1383 aa12.2□□□□□ -0.46
TPM3-221ENST00000513769 PNMA6EA0A0J9YXQ4 647 aa12.2□□□□□ -0.46
TPM3-221ENST00000513769 BMP2KLQ5H9B9 411 aa12.2□□□□□ -0.46
TPM3-221ENST00000513769 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
TPM3-221ENST00000513769 CAMKK2Q96RR4 588 aa12.2□□□□□ -0.46
TPM3-221ENST00000513769 PLA2G12BQ9BX93 195 aa12.2□□□□□ -0.46
TPM3-221ENST00000513769 LNPKQ9C0E8 428 aa12.2□□□□□ -0.46
TPM3-221ENST00000513769 THSD7AQ9UPZ6 1657 aa12.19□□□□□ -0.46
TPM3-221ENST00000513769 EVI5O60447 810 aa12.19□□□□□ -0.46
TPM3-221ENST00000513769 SURF6O75683 361 aaKnown RBP12.19□□□□□ -0.46
TPM3-221ENST00000513769 CRKLP46109 303 aaKnown RBP12.19□□□□□ -0.46
TPM3-221ENST00000513769 CASP7P55210 303 aa12.19□□□□□ -0.46
TPM3-221ENST00000513769 ZBTB38Q8NAP3 1195 aaPredicted RBP12.19□□□□□ -0.46
TPM3-221ENST00000513769 KAZALD1Q96I82 304 aa12.19□□□□□ -0.46
TPM3-221ENST00000513769 KCNK17Q96T54 332 aa12.19□□□□□ -0.46
TPM3-221ENST00000513769 COPRSQ9NQ92 184 aa12.19□□□□□ -0.46
TPM3-221ENST00000513769 CNTNAP4Q9C0A0 1308 aa12.18□□□□□ -0.46
TPM3-221ENST00000513769 PCCAP05165 728 aaPredicted RBP12.18□□□□□ -0.46
TPM3-221ENST00000513769 G3BP1Q13283 466 aaKnown RBP eCLIP12.18□□□□□ -0.461e-6■■■□□ 15.5
TPM3-221ENST00000513769 PARP10Q53GL7 1025 aa12.18□□□□□ -0.46
TPM3-221ENST00000513769 DZIP3Q86Y13 1208 aaKnown RBP12.18□□□□□ -0.46
TPM3-221ENST00000513769 PLEKHM2Q8IWE5 1019 aa12.18□□□□□ -0.46
TPM3-221ENST00000513769 ZNF34Q8IZ26 560 aa12.18□□□□□ -0.46
TPM3-221ENST00000513769 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
TPM3-221ENST00000513769 STAP2Q9UGK3 403 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms