RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	CCDC93	Q567U6	631 aa		11.07	□□□□□ -0.64
ACSF2-223	ENST00000513101	RTL5	Q5HYW3	569 aa	Predicted RBP	11.07	□□□□□ -0.64
ACSF2-223	ENST00000513101	C20orf194	Q5TEA3	1177 aa		11.07	□□□□□ -0.64
ACSF2-223	ENST00000513101	ATF7IP	Q6VMQ6	1270 aa		11.07	□□□□□ -0.64
ACSF2-223	ENST00000513101	PLA2G12B	Q9BX93	195 aa		11.07	□□□□□ -0.64
ACSF2-223	ENST00000513101	BCL2L13	Q9BXK5	485 aa		11.07	□□□□□ -0.64
ACSF2-223	ENST00000513101	SRCIN1	Q9C0H9	1055 aa		11.07	□□□□□ -0.64
ACSF2-223	ENST00000513101	LTBP3	Q9NS15	1303 aa		11.07	□□□□□ -0.64
ACSF2-223	ENST00000513101	NFKBIE	O00221	500 aa		11.06	□□□□□ -0.64
ACSF2-223	ENST00000513101	TRIM27	P14373	513 aa		11.06	□□□□□ -0.64
ACSF2-223	ENST00000513101	CASP7	P55210	303 aa		11.06	□□□□□ -0.64
ACSF2-223	ENST00000513101	GRAP	Q13588	217 aa		11.06	□□□□□ -0.64
ACSF2-223	ENST00000513101	TMC4	Q7Z404	712 aa		11.06	□□□□□ -0.64
ACSF2-223	ENST00000513101	RTKN2	Q8IZC4	609 aa		11.06	□□□□□ -0.64
ACSF2-223	ENST00000513101	EXOC6	Q8TAG9	804 aa		11.06	□□□□□ -0.64
ACSF2-223	ENST00000513101	GRAPL	Q8TC17	118 aa	Predicted RBP	11.06	□□□□□ -0.64
ACSF2-223	ENST00000513101	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.06	□□□□□ -0.64
ACSF2-223	ENST00000513101	ABCC4	O15439	1325 aa		11.06	□□□□□ -0.64
ACSF2-223	ENST00000513101	PPEF1	O14829	653 aa	Predicted RBP	11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	LMNB1	P20700	586 aa		11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	BRCA1	P38398	1863 aa	Known RBP	11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	CCDC152	Q4G0S7	254 aa		11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	C9orf131	Q5VYM1	1079 aa		11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	SLC4A10	Q6U841	1118 aa		11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	UBE3B	Q7Z3V4	1068 aa		11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	JARID2	Q92833	1246 aa	Predicted RBP	11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	CRBN	Q96SW2	442 aa		11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	API5	Q9BZZ5	524 aa	Known RBP	11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	NOB1	Q9ULX3	412 aa	Known RBP	11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	ATP6V0A2	Q9Y487	856 aa		11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	ANKRD36C	Q5JPF3	1778 aa		11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	ARFGEF2	Q9Y6D5	1785 aa		11.05	□□□□□ -0.64
ACSF2-223	ENST00000513101	DLEC1	Q9Y238	1755 aa		11.04	□□□□□ -0.64
ACSF2-223	ENST00000513101	GRM8	O00222	908 aa		11.04	□□□□□ -0.64
ACSF2-223	ENST00000513101	CTSW	P56202	376 aa		11.04	□□□□□ -0.64
ACSF2-223	ENST00000513101	RPS8	P62241	208 aa	Known RBP	11.04	□□□□□ -0.64
ACSF2-223	ENST00000513101	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.04	□□□□□ -0.64	1e-6	■■■■□ 23.4
ACSF2-223	ENST00000513101	SP8	Q8IXZ3	490 aa		11.04	□□□□□ -0.64
ACSF2-223	ENST00000513101	DZIP1L	Q8IYY4	767 aa	Known RBP	11.04	□□□□□ -0.64
ACSF2-223	ENST00000513101	TTLL11	Q8NHH1	800 aa		11.04	□□□□□ -0.64
ACSF2-223	ENST00000513101	TMX4	Q9H1E5	349 aa	Predicted RBP	11.04	□□□□□ -0.64
ACSF2-223	ENST00000513101	TAOK3	Q9H2K8	898 aa		11.04	□□□□□ -0.64
ACSF2-223	ENST00000513101	ARFGEF1	Q9Y6D6	1849 aa		11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	CSF1R	P07333	972 aa		11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	RLBP1	P12271	317 aa		11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	RASSF7	Q02833	373 aa		11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	MVP	Q14764	893 aa	Known RBP	11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	PSMD1	Q99460	953 aa		11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	RNF181	Q9P0P0	153 aa		11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	COL11A2	P13942	1736 aa	Predicted RBP	11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	UTY	O14607	1347 aa		11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	RTL9	Q8NET4	1388 aa		11.03	□□□□□ -0.64
ACSF2-223	ENST00000513101	CCT4	P50991	539 aa	Known RBP	11.02	□□□□□ -0.65
ACSF2-223	ENST00000513101	PRELP	P51888	382 aa		11.02	□□□□□ -0.65
ACSF2-223	ENST00000513101	OLFM4	Q6UX06	510 aa		11.02	□□□□□ -0.65
ACSF2-223	ENST00000513101	PANK1	Q8TE04	598 aa		11.02	□□□□□ -0.65
ACSF2-223	ENST00000513101	CELF1	Q92879	486 aa	Known RBP	11.02	□□□□□ -0.65
ACSF2-223	ENST00000513101	SEC31B	Q9NQW1	1179 aa		11.02	□□□□□ -0.65
ACSF2-223	ENST00000513101	SNED1	Q8TER0	1413 aa		11.01	□□□□□ -0.65
ACSF2-223	ENST00000513101	SLX4	Q8IY92	1834 aa		11.01	□□□□□ -0.65
ACSF2-223	ENST00000513101	FOXO4	P98177	505 aa		11.01	□□□□□ -0.65
ACSF2-223	ENST00000513101	FRAT1	Q92837	279 aa	Predicted RBP	11.01	□□□□□ -0.65
ACSF2-223	ENST00000513101	CDC5L	Q99459	802 aa	Known RBP	11.01	□□□□□ -0.65
ACSF2-223	ENST00000513101	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.01	□□□□□ -0.65
ACSF2-223	ENST00000513101	VPS33B	Q9H267	617 aa		11.01	□□□□□ -0.65
ACSF2-223	ENST00000513101	DDX19B	Q9UMR2	479 aa		11.01	□□□□□ -0.65
ACSF2-223	ENST00000513101	INTS3	Q68E01	1043 aa	Known RBP	11	□□□□□ -0.65
ACSF2-223	ENST00000513101	ANKRD18A	Q8IVF6	992 aa		11	□□□□□ -0.65
ACSF2-223	ENST00000513101	MPND	Q8N594	471 aa		11	□□□□□ -0.65
ACSF2-223	ENST00000513101	SUPT20H	Q8NEM7	779 aa		11	□□□□□ -0.65
ACSF2-223	ENST00000513101	USP44	Q9H0E7	712 aa		11	□□□□□ -0.65
ACSF2-223	ENST00000513101	CHMP4B	Q9H444	224 aa	Known RBP	11	□□□□□ -0.65
ACSF2-223	ENST00000513101	GREM2	Q9H772	168 aa		11	□□□□□ -0.65
ACSF2-223	ENST00000513101	CEP350	Q5VT06	3117 aa		10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	ITGA6	P23229	1130 aa		10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	DPP8	Q6V1X1	898 aa	Predicted RBP	10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	FTSJ3	Q8IY81	847 aa	Known RBP	10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	CLUAP1	Q96AJ1	413 aa		10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	SUCLG2	Q96I99	432 aa		10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	BSDC1	Q9NW68	430 aa	Predicted RBP	10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	PODXL2	Q9NZ53	605 aa		10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	HDAC5	Q9UQL6	1122 aa		10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	TNN	Q9UQP3	1299 aa		10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	COG6	Q9Y2V7	657 aa		10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	KDM2B	Q8NHM5	1336 aa		10.99	□□□□□ -0.65
ACSF2-223	ENST00000513101	IGHMBP2	P38935	993 aa	Known RBP	10.98	□□□□□ -0.65
ACSF2-223	ENST00000513101	IARS	P41252	1262 aa	Known RBP	10.98	□□□□□ -0.65
ACSF2-223	ENST00000513101	EPHA10	Q5JZY3	1008 aa		10.98	□□□□□ -0.65
ACSF2-223	ENST00000513101	LMBR1L	Q6UX01	489 aa		10.98	□□□□□ -0.65
ACSF2-223	ENST00000513101	TMEM57	Q8N5G2	664 aa		10.98	□□□□□ -0.65
ACSF2-223	ENST00000513101	KAZALD1	Q96I82	304 aa		10.98	□□□□□ -0.65
ACSF2-223	ENST00000513101	CCDC136	Q96JN2	1154 aa		10.98	□□□□□ -0.65
ACSF2-223	ENST00000513101	ZBTB40	Q9NUA8	1239 aa		10.98	□□□□□ -0.65
ACSF2-223	ENST00000513101	DDX60	Q8IY21	1712 aa	Known RBP	10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms