RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ERBB3P21860 1342 aa15.35■□□□□ 0.05
PCDHA4-202ENST00000512229 PPRC1Q5VV67 1664 aaKnown RBP15.35■□□□□ 0.05
PCDHA4-202ENST00000512229 SETBP1Q9Y6X0 1596 aa15.34■□□□□ 0.05
PCDHA4-202ENST00000512229 MCM5P33992 734 aa15.34■□□□□ 0.05
PCDHA4-202ENST00000512229 HOMER1Q86YM7 354 aa15.34■□□□□ 0.05
PCDHA4-202ENST00000512229 CTCFLQ8NI51 663 aaPredicted RBP15.34■□□□□ 0.05
PCDHA4-202ENST00000512229 PIBF1Q8WXW3 757 aa15.34■□□□□ 0.05
PCDHA4-202ENST00000512229 RTCBQ9Y3I0 505 aaKnown RBP15.34■□□□□ 0.05
PCDHA4-202ENST00000512229 ANKARQ7Z5J8 1434 aa15.34■□□□□ 0.05
PCDHA4-202ENST00000512229 LDHCP07864 332 aa15.34■□□□□ 0.05
PCDHA4-202ENST00000512229 SH3TC1Q8TE82 1336 aa15.34■□□□□ 0.05
PCDHA4-202ENST00000512229 MAP3K11Q16584 847 aa15.34■□□□□ 0.05
PCDHA4-202ENST00000512229 TFIP11Q9UBB9 837 aaKnown RBP15.34■□□□□ 0.05
PCDHA4-202ENST00000512229 MFSD6Q6ZSS7 791 aa15.33■□□□□ 0.05
PCDHA4-202ENST00000512229 ARID3AQ99856 593 aa15.33■□□□□ 0.05
PCDHA4-202ENST00000512229 NEURL1BA8MQ27 555 aa15.33■□□□□ 0.04
PCDHA4-202ENST00000512229 BEND3Q5T5X7 828 aa15.33■□□□□ 0.04
PCDHA4-202ENST00000512229 DBNDD2Q9BQY9 259 aa15.33■□□□□ 0.04
PCDHA4-202ENST00000512229 LRRC2Q9BYS8 371 aa15.33■□□□□ 0.04
PCDHA4-202ENST00000512229 TMEM67Q5HYA8 995 aa15.33■□□□□ 0.04
PCDHA4-202ENST00000512229 ZNF444Q8N0Y2 327 aaPredicted RBP15.33■□□□□ 0.04
PCDHA4-202ENST00000512229 CCDC43Q96MW1 224 aaKnown RBP15.33■□□□□ 0.04
PCDHA4-202ENST00000512229 AOX1Q06278 1338 aa15.33■□□□□ 0.04
PCDHA4-202ENST00000512229 A0A1B0GUL7 405 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 GOLGA8AA7E2F4 631 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 TNNI3KQ59H18 835 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 ORC3Q9UBD5 711 aaPredicted RBP15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 FPGT-TNNI3KV9GXZ4 949 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 RAD50Q92878 1312 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 SPTY2D1Q68D10 685 aaPredicted RBP15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 MICU3Q86XE3 530 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 SLF2Q8IX21 1173 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 KIDINS220Q9ULH0 1771 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 SMC2O95347 1197 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 CREB3L3Q68CJ9 461 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 CDK5RAP3Q96JB5 506 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 NYXQ9GZU5 481 aa15.32■□□□□ 0.04
PCDHA4-202ENST00000512229 RNF113AO15541 343 aaKnown RBP15.31■□□□□ 0.04
PCDHA4-202ENST00000512229 BAG3O95817 575 aa15.31■□□□□ 0.04
PCDHA4-202ENST00000512229 CYP7A1P22680 504 aa15.31■□□□□ 0.04
PCDHA4-202ENST00000512229 IARSP41252 1262 aaKnown RBP15.31■□□□□ 0.04
PCDHA4-202ENST00000512229 PARP10Q53GL7 1025 aa15.31■□□□□ 0.04
PCDHA4-202ENST00000512229 CARD10Q9BWT7 1032 aa15.31■□□□□ 0.04
PCDHA4-202ENST00000512229 BCL11BQ9C0K0 894 aaPredicted RBP15.31■□□□□ 0.04
PCDHA4-202ENST00000512229 PPFIA3O75145 1194 aa15.31■□□□□ 0.04
PCDHA4-202ENST00000512229 CCDC183Q5T5S1 534 aa15.31■□□□□ 0.04
PCDHA4-202ENST00000512229 CEP57L1Q8IYX8 460 aa15.31■□□□□ 0.04
PCDHA4-202ENST00000512229 TMOD2Q9NZR1 351 aa15.31■□□□□ 0.04
PCDHA4-202ENST00000512229 CCDC171Q6TFL3 1326 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 KLHL40Q2TBA0 621 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 PNPLA6Q8IY17 1366 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 CAMK4Q16566 473 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 SPC24Q8NBT2 197 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 KLF18A0A0U1RQI7 1052 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 SGSM2O43147 1006 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 HCLS1P14317 486 aaPredicted RBP15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 ITGA6P23229 1130 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 AK2P54819 239 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 ST5P78524 1137 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 CATIPQ7Z7H3 387 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 ZNF594Q96JF6 807 aaPredicted RBP15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 ERBB4Q15303 1308 aa15.3■□□□□ 0.04
PCDHA4-202ENST00000512229 ZSCAN22P10073 491 aaPredicted RBP15.29■□□□□ 0.04
PCDHA4-202ENST00000512229 TCIRG1Q13488 830 aa15.29■□□□□ 0.04
PCDHA4-202ENST00000512229 CCAR2Q8N163 923 aaKnown RBP15.29■□□□□ 0.04
PCDHA4-202ENST00000512229 FAM98CQ17RN3 349 aaKnown RBP15.29■□□□□ 0.04
PCDHA4-202ENST00000512229 MPNDQ8N594 471 aa15.29■□□□□ 0.04
PCDHA4-202ENST00000512229 PDILTQ8N807 584 aa15.29■□□□□ 0.04
PCDHA4-202ENST00000512229 CAMSAP1Q5T5Y3 1602 aa15.29■□□□□ 0.04
PCDHA4-202ENST00000512229 METAP2P50579 478 aaKnown RBP eCLIP15.29■□□□□ 0.04
PCDHA4-202ENST00000512229 Q6ZUG5 572 aa15.29■□□□□ 0.04
PCDHA4-202ENST00000512229 CEP131Q9UPN4 1083 aa15.29■□□□□ 0.04
PCDHA4-202ENST00000512229 PDE8AO60658 829 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 SSRP1Q08945 709 aaKnown RBP15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 PROSER3Q2NL68 480 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 RAB11FIP4Q86YS3 637 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 PDE4BQ07343 736 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 FILIP1LQ4L180 1135 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 NAA16Q6N069 864 aaPredicted RBP15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 TTLL7Q6ZT98 887 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 CCDC144CPQ8IYA2 1237 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 CRACR2BQ8N4Y2 399 aaPredicted RBP15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 ZGPATQ8N5A5 531 aaKnown RBP15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 INTS4Q96HW7 963 aaKnown RBP15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 SLC4A4Q9Y6R1 1079 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 WDR17Q8IZU2 1322 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 AGLP35573 1532 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 TSPY2A6NKD2 308 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 GNPATO15228 680 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 CRNKL1Q9BZJ0 848 aaKnown RBP15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 CCDC87Q9NVE4 849 aa15.28■□□□□ 0.04
PCDHA4-202ENST00000512229 KDRP35968 1356 aa15.27■□□□□ 0.04
PCDHA4-202ENST00000512229 SERPINC1P01008 464 aa15.27■□□□□ 0.04
PCDHA4-202ENST00000512229 GSPT1P15170 499 aaKnown RBP15.27■□□□□ 0.03
PCDHA4-202ENST00000512229 UBE2HP62256 183 aa15.27■□□□□ 0.03
PCDHA4-202ENST00000512229 ZSCAN16Q9H4T2 348 aaPredicted RBP15.27■□□□□ 0.03
PCDHA4-202ENST00000512229 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.03
PCDHA4-202ENST00000512229 DACH1Q9UI36 760 aa15.27■□□□□ 0.03
PCDHA4-202ENST00000512229 ARHGEF40Q8TER5 1519 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms