RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 SF3B3Q15393 1217 aaKnown RBP12.38□□□□□ -0.43
PDGFRA-209ENST00000512143 HSP90AB4PQ58FF6 505 aa12.38□□□□□ -0.43
PDGFRA-209ENST00000512143 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
PDGFRA-209ENST00000512143 NLGN1Q8N2Q7 840 aa12.38□□□□□ -0.43
PDGFRA-209ENST00000512143 RTL9Q8NET4 1388 aa12.38□□□□□ -0.43
PDGFRA-209ENST00000512143 ABCC12Q96J65 1359 aa12.38□□□□□ -0.43
PDGFRA-209ENST00000512143 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
PDGFRA-209ENST00000512143 SASH1O94885 1247 aa12.37□□□□□ -0.43
PDGFRA-209ENST00000512143 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
PDGFRA-209ENST00000512143 KLHDC4Q8TBB5 520 aa12.37□□□□□ -0.43
PDGFRA-209ENST00000512143 RHPN1Q8TCX5 695 aa12.37□□□□□ -0.43
PDGFRA-209ENST00000512143 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
PDGFRA-209ENST00000512143 LNPKQ9C0E8 428 aa12.37□□□□□ -0.43
PDGFRA-209ENST00000512143 GREM2Q9H772 168 aa12.37□□□□□ -0.43
PDGFRA-209ENST00000512143 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
PDGFRA-209ENST00000512143 NRXN2Q9P2S2 1712 aa12.37□□□□□ -0.43
PDGFRA-209ENST00000512143 SMARCA5O60264 1052 aaPredicted RBP12.36□□□□□ -0.43
PDGFRA-209ENST00000512143 SERPINB2P05120 415 aa12.36□□□□□ -0.43
PDGFRA-209ENST00000512143 PRR5LQ6MZQ0 368 aa12.36□□□□□ -0.43
PDGFRA-209ENST00000512143 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
PDGFRA-209ENST00000512143 ATG9AQ7Z3C6 839 aa12.36□□□□□ -0.43
PDGFRA-209ENST00000512143 KIF1BPQ96EK5 621 aa12.36□□□□□ -0.43
PDGFRA-209ENST00000512143 SALL3Q9BXA9 1300 aa12.36□□□□□ -0.43
PDGFRA-209ENST00000512143 CIAO1O76071 339 aa12.35□□□□□ -0.43
PDGFRA-209ENST00000512143 ITGA6P23229 1130 aa12.35□□□□□ -0.43
PDGFRA-209ENST00000512143 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
PDGFRA-209ENST00000512143 CCDC57Q2TAC2 916 aa12.35□□□□□ -0.43
PDGFRA-209ENST00000512143 ERC1Q8IUD2 1116 aa12.35□□□□□ -0.43
PDGFRA-209ENST00000512143 C16orf71Q8IYS4 520 aaPredicted RBP12.35□□□□□ -0.43
PDGFRA-209ENST00000512143 ZNF594Q96JF6 807 aaPredicted RBP12.35□□□□□ -0.43
PDGFRA-209ENST00000512143 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.35□□□□□ -0.43
PDGFRA-209ENST00000512143 ANKRD18BA2A2Z9 1011 aa12.34□□□□□ -0.43
PDGFRA-209ENST00000512143 KLRG2A4D1S0 409 aaPredicted RBP12.34□□□□□ -0.43
PDGFRA-209ENST00000512143 EYA2O00167 538 aa12.34□□□□□ -0.43
PDGFRA-209ENST00000512143 APBB1O00213 710 aa12.34□□□□□ -0.43
PDGFRA-209ENST00000512143 G3BP1Q13283 466 aaKnown RBP eCLIP12.34□□□□□ -0.43
PDGFRA-209ENST00000512143 CCDC152Q4G0S7 254 aa12.34□□□□□ -0.43
PDGFRA-209ENST00000512143 PLEKHM2Q8IWE5 1019 aa12.34□□□□□ -0.43
PDGFRA-209ENST00000512143 CNBD1Q8NA66 436 aa12.34□□□□□ -0.43
PDGFRA-209ENST00000512143 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
PDGFRA-209ENST00000512143 PDGFDQ9GZP0 370 aaPredicted RBP12.34□□□□□ -0.43
PDGFRA-209ENST00000512143 CHMP3Q9Y3E7 222 aa12.34□□□□□ -0.43
PDGFRA-209ENST00000512143 LRP5O75197 1615 aa12.33□□□□□ -0.43
PDGFRA-209ENST00000512143 CASZ1Q86V15 1759 aa12.33□□□□□ -0.44
PDGFRA-209ENST00000512143 GTF2E1P29083 439 aaPredicted RBP12.33□□□□□ -0.44
PDGFRA-209ENST00000512143 IL15P40933 162 aaPredicted RBP12.33□□□□□ -0.44
PDGFRA-209ENST00000512143 RGS3P49796 1198 aa12.33□□□□□ -0.44
PDGFRA-209ENST00000512143 OTUD7AQ8TE49 926 aaPredicted RBP12.33□□□□□ -0.44
PDGFRA-209ENST00000512143 NLRP3Q96P20 1036 aa12.33□□□□□ -0.44
PDGFRA-209ENST00000512143 PUS3Q9BZE2 481 aaKnown RBP12.33□□□□□ -0.44
PDGFRA-209ENST00000512143 SIL1Q9H173 461 aa12.33□□□□□ -0.44
PDGFRA-209ENST00000512143 OSBPL3Q9H4L5 887 aa12.33□□□□□ -0.44
PDGFRA-209ENST00000512143 RIPOR2Q9Y4F9 1068 aa12.33□□□□□ -0.44
PDGFRA-209ENST00000512143 COL4A1P02462 1669 aa12.32□□□□□ -0.44
PDGFRA-209ENST00000512143 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
PDGFRA-209ENST00000512143 MMP10P09238 476 aa12.32□□□□□ -0.44
PDGFRA-209ENST00000512143 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
PDGFRA-209ENST00000512143 CRY2Q49AN0 593 aa12.32□□□□□ -0.44
PDGFRA-209ENST00000512143 LRRC24Q50LG9 513 aa12.32□□□□□ -0.44
PDGFRA-209ENST00000512143 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
PDGFRA-209ENST00000512143 SLC16A10Q8TF71 515 aa12.32□□□□□ -0.44
PDGFRA-209ENST00000512143 IL1RAPL2Q9NP60 686 aa12.32□□□□□ -0.44
PDGFRA-209ENST00000512143 SEC31BQ9NQW1 1179 aa12.32□□□□□ -0.44
PDGFRA-209ENST00000512143 STAP2Q9UGK3 403 aa12.32□□□□□ -0.44
PDGFRA-209ENST00000512143 OS9Q13438 667 aaPredicted RBP12.31□□□□□ -0.44
PDGFRA-209ENST00000512143 CLASRPQ8N2M8 674 aaKnown RBP12.31□□□□□ -0.44
PDGFRA-209ENST00000512143 EAF2Q96CJ1 260 aaPredicted RBP12.31□□□□□ -0.44
PDGFRA-209ENST00000512143 GPR108Q9NPR9 543 aa12.31□□□□□ -0.44
PDGFRA-209ENST00000512143 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
PDGFRA-209ENST00000512143 ANKRD31Q8N7Z5 1873 aa12.3□□□□□ -0.44
PDGFRA-209ENST00000512143 KCNA4P22459 653 aa12.3□□□□□ -0.44
PDGFRA-209ENST00000512143 ST5P78524 1137 aa12.3□□□□□ -0.44
PDGFRA-209ENST00000512143 TFCP2Q12800 502 aa12.3□□□□□ -0.44
PDGFRA-209ENST00000512143 MSL1Q68DK7 614 aa12.3□□□□□ -0.44
PDGFRA-209ENST00000512143 LDHAL6AQ6ZMR3 332 aa12.3□□□□□ -0.44
PDGFRA-209ENST00000512143 VGLL2Q8N8G2 317 aa12.3□□□□□ -0.44
PDGFRA-209ENST00000512143 BRIP1Q9BX63 1249 aa12.3□□□□□ -0.44
PDGFRA-209ENST00000512143 TAF1P21675 1872 aa12.29□□□□□ -0.44
PDGFRA-209ENST00000512143 HOXA10P31260 410 aaPredicted RBP12.29□□□□□ -0.44
PDGFRA-209ENST00000512143 PDE1AP54750 535 aa12.29□□□□□ -0.44
PDGFRA-209ENST00000512143 TNNI3KQ59H18 835 aa12.29□□□□□ -0.44
PDGFRA-209ENST00000512143 TAF7LQ5H9L4 462 aa12.29□□□□□ -0.44
PDGFRA-209ENST00000512143 CDC5LQ99459 802 aaKnown RBP12.29□□□□□ -0.44
PDGFRA-209ENST00000512143 PARP3Q9Y6F1 533 aa12.29□□□□□ -0.44
PDGFRA-209ENST00000512143 FPGT-TNNI3KV9GXZ4 949 aa12.29□□□□□ -0.44
PDGFRA-209ENST00000512143 AOX1Q06278 1338 aa12.29□□□□□ -0.44
PDGFRA-209ENST00000512143 MX1P20591 662 aa12.28□□□□□ -0.44
PDGFRA-209ENST00000512143 BMP2KLQ5H9B9 411 aa12.28□□□□□ -0.44
PDGFRA-209ENST00000512143 PELP1Q8IZL8 1130 aaKnown RBP12.28□□□□□ -0.44
PDGFRA-209ENST00000512143 CELF1Q92879 486 aaKnown RBP12.28□□□□□ -0.44
PDGFRA-209ENST00000512143 BSDC1Q9NW68 430 aaPredicted RBP12.28□□□□□ -0.44
PDGFRA-209ENST00000512143 CEP126Q9P2H0 1117 aa12.28□□□□□ -0.44
PDGFRA-209ENST00000512143 MROH5Q6ZUA9 1318 aa12.28□□□□□ -0.44
PDGFRA-209ENST00000512143 NPHP1O15259 732 aa12.27□□□□□ -0.45
PDGFRA-209ENST00000512143 GSPT1P15170 499 aaKnown RBP12.27□□□□□ -0.45
PDGFRA-209ENST00000512143 IGHMBP2P38935 993 aaKnown RBP12.27□□□□□ -0.45
PDGFRA-209ENST00000512143 RPS8P62241 208 aaKnown RBP12.27□□□□□ -0.45
PDGFRA-209ENST00000512143 TTC22Q5TAA0 569 aa12.27□□□□□ -0.45
PDGFRA-209ENST00000512143 AACSQ86V21 672 aa12.27□□□□□ -0.45
PDGFRA-209ENST00000512143 ANKRD18AQ8IVF6 992 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms