RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 DCTPP1Q9H773 170 aa11.33□□□□□ -0.6
NR1I3-228ENST00000511676 NMRK2Q9NPI5 230 aa11.33□□□□□ -0.6
NR1I3-228ENST00000511676 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
NR1I3-228ENST00000511676 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
NR1I3-228ENST00000511676 ALDH1B1P30837 517 aa11.32□□□□□ -0.6
NR1I3-228ENST00000511676 ATP8B2P98198 1209 aa11.32□□□□□ -0.6
NR1I3-228ENST00000511676 NUCB1Q02818 461 aa11.32□□□□□ -0.6
NR1I3-228ENST00000511676 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
NR1I3-228ENST00000511676 GCKRQ14397 625 aa11.32□□□□□ -0.6
NR1I3-228ENST00000511676 NFIXQ14938 502 aa11.32□□□□□ -0.6
NR1I3-228ENST00000511676 TPTE2Q6XPS3 522 aa11.32□□□□□ -0.6
NR1I3-228ENST00000511676 GIGYF2Q6Y7W6 1299 aaKnown RBP11.32□□□□□ -0.6
NR1I3-228ENST00000511676 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
NR1I3-228ENST00000511676 SSH3Q8TE77 659 aa11.32□□□□□ -0.6
NR1I3-228ENST00000511676 ZNF622Q969S3 477 aaKnown RBP eCLIP11.32□□□□□ -0.6
NR1I3-228ENST00000511676 C9orf78Q9NZ63 289 aaPredicted RBP11.32□□□□□ -0.6
NR1I3-228ENST00000511676 CARMIL3Q8ND23 1372 aa11.31□□□□□ -0.6
NR1I3-228ENST00000511676 ARFGEF1Q9Y6D6 1849 aa11.31□□□□□ -0.6
NR1I3-228ENST00000511676 EIF5P55010 431 aaKnown RBP11.31□□□□□ -0.6
NR1I3-228ENST00000511676 ERFEQ4G0M1 354 aa11.31□□□□□ -0.6
NR1I3-228ENST00000511676 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
NR1I3-228ENST00000511676 STYK1Q6J9G0 422 aa11.31□□□□□ -0.6
NR1I3-228ENST00000511676 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
NR1I3-228ENST00000511676 MASTLQ96GX5 879 aa11.31□□□□□ -0.6
NR1I3-228ENST00000511676 SRP68Q9UHB9 627 aaKnown RBP11.31□□□□□ -0.6
NR1I3-228ENST00000511676 CHRNA5P30532 468 aa11.3□□□□□ -0.6
NR1I3-228ENST00000511676 DDR1Q08345 913 aa11.3□□□□□ -0.6
NR1I3-228ENST00000511676 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
NR1I3-228ENST00000511676 RTKN2Q8IZC4 609 aa11.3□□□□□ -0.6
NR1I3-228ENST00000511676 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
NR1I3-228ENST00000511676 ISCA1Q9BUE6 129 aa11.3□□□□□ -0.6
NR1I3-228ENST00000511676 TAOK3Q9H2K8 898 aa11.3□□□□□ -0.6
NR1I3-228ENST00000511676 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
NR1I3-228ENST00000511676 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
NR1I3-228ENST00000511676 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
NR1I3-228ENST00000511676 RAB11FIP3O75154 756 aa11.29□□□□□ -0.6
NR1I3-228ENST00000511676 NBPF7P0C2Y1 421 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-228ENST00000511676 GTF2E1P29083 439 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-228ENST00000511676 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
NR1I3-228ENST00000511676 PNMA8AQ86V59 439 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-228ENST00000511676 CHD1LQ86WJ1 897 aa11.29□□□□□ -0.6
NR1I3-228ENST00000511676 MYD88Q99836 296 aa11.29□□□□□ -0.6
NR1I3-228ENST00000511676 NYXQ9GZU5 481 aa11.29□□□□□ -0.6
NR1I3-228ENST00000511676 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
NR1I3-228ENST00000511676 ZBTB1Q9Y2K1 713 aa11.29□□□□□ -0.6
NR1I3-228ENST00000511676 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
NR1I3-228ENST00000511676 H7C1W4 665 aa11.28□□□□□ -0.6
NR1I3-228ENST00000511676 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
NR1I3-228ENST00000511676 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
NR1I3-228ENST00000511676 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-228ENST00000511676 TTLL7Q6ZT98 887 aa11.28□□□□□ -0.6
NR1I3-228ENST00000511676 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
NR1I3-228ENST00000511676 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
NR1I3-228ENST00000511676 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
NR1I3-228ENST00000511676 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
NR1I3-228ENST00000511676 BCORQ6W2J9 1755 aa11.27□□□□□ -0.61
NR1I3-228ENST00000511676 PCCAP05165 728 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-228ENST00000511676 CASP7P55210 303 aa11.27□□□□□ -0.61
NR1I3-228ENST00000511676 PARP10Q53GL7 1025 aa11.27□□□□□ -0.61
NR1I3-228ENST00000511676 NBPF5PQ86XG9 351 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-228ENST00000511676 TNS4Q8IZW8 715 aa11.27□□□□□ -0.61
NR1I3-228ENST00000511676 AIDAQ96BJ3 306 aa11.27□□□□□ -0.61
NR1I3-228ENST00000511676 PLA2G12BQ9BX93 195 aa11.27□□□□□ -0.61
NR1I3-228ENST00000511676 CREBZFQ9NS37 354 aa11.27□□□□□ -0.61
NR1I3-228ENST00000511676 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-228ENST00000511676 ZNF330Q9Y3S2 320 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-228ENST00000511676 SCN7AQ01118 1682 aa11.27□□□□□ -0.61
NR1I3-228ENST00000511676 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
NR1I3-228ENST00000511676 NPR1P16066 1061 aa11.26□□□□□ -0.61
NR1I3-228ENST00000511676 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-228ENST00000511676 CCDC93Q567U6 631 aa11.26□□□□□ -0.61
NR1I3-228ENST00000511676 CHADLQ6NUI6 762 aa11.26□□□□□ -0.61
NR1I3-228ENST00000511676 BICDL1Q6ZP65 573 aa11.26□□□□□ -0.61
NR1I3-228ENST00000511676 ERC1Q8IUD2 1116 aa11.26□□□□□ -0.61
NR1I3-228ENST00000511676 JDP2Q8WYK2 163 aa11.26□□□□□ -0.61
NR1I3-228ENST00000511676 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
NR1I3-228ENST00000511676 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
NR1I3-228ENST00000511676 PNMA6EA0A0J9YXQ4 647 aa11.25□□□□□ -0.61
NR1I3-228ENST00000511676 SRGAP3O43295 1099 aa11.25□□□□□ -0.61
NR1I3-228ENST00000511676 EIF5BO60841 1220 aaKnown RBP11.25□□□□□ -0.61
NR1I3-228ENST00000511676 CAMTA2O94983 1202 aa11.25□□□□□ -0.61
NR1I3-228ENST00000511676 PPP1R42Q7Z4L9 355 aa11.25□□□□□ -0.61
NR1I3-228ENST00000511676 LDHDQ86WU2 507 aa11.25□□□□□ -0.61
NR1I3-228ENST00000511676 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-228ENST00000511676 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
NR1I3-228ENST00000511676 MYH14Q7Z406 1995 aaKnown RBP11.25□□□□□ -0.61
NR1I3-228ENST00000511676 C21orf2O43822 256 aa11.24□□□□□ -0.61
NR1I3-228ENST00000511676 SRGNP10124 158 aa11.24□□□□□ -0.61
NR1I3-228ENST00000511676 ANKRD45Q5TZF3 282 aa11.24□□□□□ -0.61
NR1I3-228ENST00000511676 UBE3BQ7Z3V4 1068 aa11.24□□□□□ -0.61
NR1I3-228ENST00000511676 NLRP10Q86W26 655 aa11.24□□□□□ -0.61
NR1I3-228ENST00000511676 ZNF34Q8IZ26 560 aa11.24□□□□□ -0.61
NR1I3-228ENST00000511676 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
NR1I3-228ENST00000511676 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
NR1I3-228ENST00000511676 LRRCC1Q9C099 1032 aa11.24□□□□□ -0.61
NR1I3-228ENST00000511676 VPS33BQ9H267 617 aa11.24□□□□□ -0.61
NR1I3-228ENST00000511676 AOX1Q06278 1338 aa11.24□□□□□ -0.61
NR1I3-228ENST00000511676 PRELPP51888 382 aa11.23□□□□□ -0.61
NR1I3-228ENST00000511676 BMP2KLQ5H9B9 411 aa11.23□□□□□ -0.61
NR1I3-228ENST00000511676 TBC1D9BQ66K14 1250 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms