RNA–Protein interactions for RNA: ENST00000511412.1

ALYREF-203, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-203ENST00000511412 CCDC184Q52MB2 194 aa31.9■■■□□ 2.7
ALYREF-203ENST00000511412 TMC4Q7Z404 712 aa31.9■■■□□ 2.7
ALYREF-203ENST00000511412 RIC3Q7Z5B4 369 aa31.9■■■□□ 2.7
ALYREF-203ENST00000511412 PHAXQ9H814 394 aaKnown RBP31.89■■■□□ 2.7
ALYREF-203ENST00000511412 SCNN1DP51172 638 aa31.88■■■□□ 2.69
ALYREF-203ENST00000511412 TRIM28Q13263 835 aaKnown RBP31.88■■■□□ 2.69
ALYREF-203ENST00000511412 C8orf58Q8NAV2 365 aa31.88■■■□□ 2.69
ALYREF-203ENST00000511412 DUOX1Q9NRD9 1551 aa31.88■■■□□ 2.69
ALYREF-203ENST00000511412 CHMP4AQ9BY43 222 aa31.87■■■□□ 2.69
ALYREF-203ENST00000511412 ITGBL1O95965 494 aaPredicted RBP31.86■■■□□ 2.69
ALYREF-203ENST00000511412 SF3B3Q15393 1217 aaKnown RBP31.86■■■□□ 2.69
ALYREF-203ENST00000511412 RTL5Q5HYW3 569 aaPredicted RBP31.86■■■□□ 2.69
ALYREF-203ENST00000511412 KIAA2012Q0VF49 1180 aa31.85■■■□□ 2.69
ALYREF-203ENST00000511412 CCDC30Q5VVM6 783 aa31.85■■■□□ 2.69
ALYREF-203ENST00000511412 MKRN1Q9UHC7 482 aaKnown RBP31.85■■■□□ 2.69
ALYREF-203ENST00000511412 ZNRF3Q9ULT6 936 aa31.85■■■□□ 2.69
ALYREF-203ENST00000511412 IRS4O14654 1257 aaPredicted RBP31.84■■■□□ 2.69
ALYREF-203ENST00000511412 MAP1SQ66K74 1059 aaPredicted RBP31.84■■■□□ 2.69
ALYREF-203ENST00000511412 PCNTO95613 3336 aa31.84■■■□□ 2.69
ALYREF-203ENST00000511412 EPS15P42566 896 aa31.83■■■□□ 2.69
ALYREF-203ENST00000511412 CCDC27Q2M243 656 aa31.83■■■□□ 2.69
ALYREF-203ENST00000511412 CNTROBQ8N137 903 aa31.83■■■□□ 2.69
ALYREF-203ENST00000511412 MYD88Q99836 296 aa31.83■■■□□ 2.69
ALYREF-203ENST00000511412 TMEM88BA6NKF7 163 aa31.82■■■□□ 2.68
ALYREF-203ENST00000511412 ZBTB38Q8NAP3 1195 aaPredicted RBP31.82■■■□□ 2.68
ALYREF-203ENST00000511412 CELF1Q92879 486 aaKnown RBP31.82■■■□□ 2.68
ALYREF-203ENST00000511412 COL4A1P02462 1669 aa31.82■■■□□ 2.68
ALYREF-203ENST00000511412 CNTNAP1P78357 1384 aa31.81■■■□□ 2.68
ALYREF-203ENST00000511412 DDX58O95786 925 aaKnown RBP31.81■■■□□ 2.68
ALYREF-203ENST00000511412 HSPA1AP0DMV8 641 aaKnown RBP31.81■■■□□ 2.68
ALYREF-203ENST00000511412 HSPA1BP0DMV9 641 aaKnown RBP31.81■■■□□ 2.68
ALYREF-203ENST00000511412 TSR2Q969E8 191 aaKnown RBP31.81■■■□□ 2.68
ALYREF-203ENST00000511412 CXCL9Q07325 125 aa31.8■■■□□ 2.68
ALYREF-203ENST00000511412 TSPYL6Q8N831 410 aa31.8■■■□□ 2.68
ALYREF-203ENST00000511412 HSP90B1P14625 803 aaKnown RBP31.79■■■□□ 2.68
ALYREF-203ENST00000511412 USP50Q70EL3 339 aaPredicted RBP31.79■■■□□ 2.68
ALYREF-203ENST00000511412 WWC1Q8IX03 1113 aa31.79■■■□□ 2.68
ALYREF-203ENST00000511412 CCDC191Q8NCU4 936 aa31.79■■■□□ 2.68
ALYREF-203ENST00000511412 MRS2Q9HD23 443 aa31.79■■■□□ 2.68
ALYREF-203ENST00000511412 CIAPIN1Q6FI81 312 aa31.78■■■□□ 2.68
ALYREF-203ENST00000511412 GPRC5DQ9NZD1 345 aa31.78■■■□□ 2.68
ALYREF-203ENST00000511412 ANP32CO43423 234 aa31.77■■■□□ 2.68
ALYREF-203ENST00000511412 METTL22Q9BUU2 404 aaPredicted RBP31.77■■■□□ 2.68
ALYREF-203ENST00000511412 ADARB2Q9NS39 739 aaKnown RBP31.76■■■□□ 2.67
ALYREF-203ENST00000511412 CWC25Q9NXE8 425 aaPredicted RBP31.76■■■□□ 2.67
ALYREF-203ENST00000511412 NSFL1CQ9UNZ2 370 aaKnown RBP31.76■■■□□ 2.67
ALYREF-203ENST00000511412 CDHR2Q9BYE9 1310 aa31.75■■■□□ 2.67
ALYREF-203ENST00000511412 ZNF316A6NFI3 1004 aaPredicted RBP31.75■■■□□ 2.67
ALYREF-203ENST00000511412 PCCAP05165 728 aaPredicted RBP31.75■■■□□ 2.67
ALYREF-203ENST00000511412 TNIP1Q15025 636 aa31.75■■■□□ 2.67
ALYREF-203ENST00000511412 STK31Q9BXU1 1019 aa31.75■■■□□ 2.67
ALYREF-203ENST00000511412 RAD17O75943 681 aa31.74■■■□□ 2.67
ALYREF-203ENST00000511412 GMPSP49915 693 aaPredicted RBP31.74■■■□□ 2.67
ALYREF-203ENST00000511412 IL16Q14005 1332 aa31.74■■■□□ 2.67
ALYREF-203ENST00000511412 WASHC4Q2M389 1173 aa31.73■■■□□ 2.67
ALYREF-203ENST00000511412 COL13A1Q5TAT6 717 aaPredicted RBP31.73■■■□□ 2.67
ALYREF-203ENST00000511412 MAP3K2Q9Y2U5 619 aa31.73■■■□□ 2.67
ALYREF-203ENST00000511412 RPS8P62241 208 aaKnown RBP31.72■■■□□ 2.67
ALYREF-203ENST00000511412 GPSM2P81274 684 aa31.72■■■□□ 2.67
ALYREF-203ENST00000511412 TWISTNBQ3B726 338 aaPredicted RBP31.72■■■□□ 2.67
ALYREF-203ENST00000511412 NCBP3Q53F19 620 aaKnown RBP31.72■■■□□ 2.67
ALYREF-203ENST00000511412 BCL2L13Q9BXK5 485 aa31.72■■■□□ 2.67
ALYREF-203ENST00000511412 YDJCA8MPS7 323 aa31.71■■■□□ 2.67
ALYREF-203ENST00000511412 C6orf229H3BNL8 230 aa31.71■■■□□ 2.67
ALYREF-203ENST00000511412 PDE8AO60658 829 aa31.71■■■□□ 2.67
ALYREF-203ENST00000511412 CCDC152Q4G0S7 254 aa31.71■■■□□ 2.67
ALYREF-203ENST00000511412 KSR2Q6VAB6 950 aa31.7■■■□□ 2.67
ALYREF-203ENST00000511412 EYA3Q99504 573 aa31.7■■■□□ 2.67
ALYREF-203ENST00000511412 SEC31BQ9NQW1 1179 aa31.7■■■□□ 2.67
ALYREF-203ENST00000511412 TRPM7Q96QT4 1865 aa31.69■■■□□ 2.66
ALYREF-203ENST00000511412 PI4KAP2A4QPH2 592 aa31.69■■■□□ 2.66
ALYREF-203ENST00000511412 PI4KAP1Q8N8J0 262 aa31.69■■■□□ 2.66
ALYREF-203ENST00000511412 POLLQ9UGP5 575 aa31.69■■■□□ 2.66
ALYREF-203ENST00000511412 VEGFBP49765 207 aa31.68■■■□□ 2.66
ALYREF-203ENST00000511412 JARID2Q92833 1246 aaPredicted RBP31.68■■■□□ 2.66
ALYREF-203ENST00000511412 DBNDD1Q9H9R9 158 aa31.68■■■□□ 2.66
ALYREF-203ENST00000511412 ABT1Q9ULW3 272 aaKnown RBP31.68■■■□□ 2.66
ALYREF-203ENST00000511412 RASSF10A6NK89 507 aa31.67■■■□□ 2.66
ALYREF-203ENST00000511412 RIMBP2O15034 1052 aa31.67■■■□□ 2.66
ALYREF-203ENST00000511412 NEXNQ0ZGT2 675 aa31.67■■■□□ 2.66
ALYREF-203ENST00000511412 MYH3P11055 1940 aa31.67■■■□□ 2.66
ALYREF-203ENST00000511412 TBC1D16Q8TBP0 767 aa31.66■■■□□ 2.66
ALYREF-203ENST00000511412 CCDC85AQ96PX6 553 aaPredicted RBP31.66■■■□□ 2.66
ALYREF-203ENST00000511412 FANCIQ9NVI1 1328 aa31.66■■■□□ 2.66
ALYREF-203ENST00000511412 IGKV5-2P06315 115 aa31.65■■■□□ 2.66
ALYREF-203ENST00000511412 DEFB115Q30KQ5 88 aa31.65■■■□□ 2.66
ALYREF-203ENST00000511412 PODXL2Q9NZ53 605 aa31.65■■■□□ 2.66
ALYREF-203ENST00000511412 FMR1Q06787 632 aaKnown RBP eCLIP31.64■■■□□ 2.66
ALYREF-203ENST00000511412 TRAF5O00463 557 aa31.63■■■□□ 2.65
ALYREF-203ENST00000511412 ECE2O60344 883 aa31.63■■■□□ 2.65
ALYREF-203ENST00000511412 SLC4A2P04920 1241 aa31.63■■■□□ 2.65
ALYREF-203ENST00000511412 GPR101Q96P66 508 aaPredicted RBP31.63■■■□□ 2.65
ALYREF-203ENST00000511412 ANKIB1Q9P2G1 1089 aa31.63■■■□□ 2.65
ALYREF-203ENST00000511412 CNOT7Q9UIV1 285 aaKnown RBP31.63■■■□□ 2.65
ALYREF-203ENST00000511412 PSMD14O00487 310 aa31.62■■■□□ 2.65
ALYREF-203ENST00000511412 UFL1O94874 794 aa31.62■■■□□ 2.65
ALYREF-203ENST00000511412 CTSWP56202 376 aa31.62■■■□□ 2.65
ALYREF-203ENST00000511412 G2E3Q7L622 706 aa31.62■■■□□ 2.65
ALYREF-203ENST00000511412 ANKRD18AQ8IVF6 992 aa31.62■■■□□ 2.65
ALYREF-203ENST00000511412 MICALL2Q8IY33 904 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms