RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 CDHR2Q9BYE9 1310 aa29.89■■■□□ 2.38
SMAD5-207ENST00000511116 CST9Q5W186 159 aa29.88■■■□□ 2.37
SMAD5-207ENST00000511116 DPP8Q6V1X1 898 aaPredicted RBP29.88■■■□□ 2.37
SMAD5-207ENST00000511116 MPNDQ8N594 471 aa29.88■■■□□ 2.37
SMAD5-207ENST00000511116 MAP2K1Q02750 393 aaPredicted RBP29.87■■■□□ 2.37
SMAD5-207ENST00000511116 DDX46Q7L014 1031 aaKnown RBP29.87■■■□□ 2.37
SMAD5-207ENST00000511116 PGAP2Q9UHJ9 254 aa29.87■■■□□ 2.37
SMAD5-207ENST00000511116 DDX60Q8IY21 1712 aaKnown RBP29.87■■■□□ 2.37
SMAD5-207ENST00000511116 TMC4Q7Z404 712 aa29.86■■■□□ 2.37
SMAD5-207ENST00000511116 RUNDC1Q96C34 613 aa29.86■■■□□ 2.37
SMAD5-207ENST00000511116 CHPF2Q9P2E5 772 aa29.86■■■□□ 2.37
SMAD5-207ENST00000511116 TAF1P21675 1872 aa29.86■■■□□ 2.37
SMAD5-207ENST00000511116 HSPA8P11142 646 aaKnown RBP29.85■■■□□ 2.37
SMAD5-207ENST00000511116 LBX1P52954 281 aa29.85■■■□□ 2.37
SMAD5-207ENST00000511116 CCDC146Q8IYE0 955 aa29.85■■■□□ 2.37
SMAD5-207ENST00000511116 PLBD2Q8NHP8 589 aa29.85■■■□□ 2.37
SMAD5-207ENST00000511116 TRAF5O00463 557 aa29.84■■■□□ 2.37
SMAD5-207ENST00000511116 GMPSP49915 693 aaPredicted RBP29.84■■■□□ 2.37
SMAD5-207ENST00000511116 ISCA1Q9BUE6 129 aa29.84■■■□□ 2.37
SMAD5-207ENST00000511116 TLL2Q9Y6L7 1015 aa29.84■■■□□ 2.37
SMAD5-207ENST00000511116 NEUROD2Q15784 382 aa29.83■■■□□ 2.37
SMAD5-207ENST00000511116 CIAPIN1Q6FI81 312 aa29.83■■■□□ 2.37
SMAD5-207ENST00000511116 CAPNS2Q96L46 248 aa29.83■■■□□ 2.37
SMAD5-207ENST00000511116 HDGFL1Q5TGJ6 251 aa29.82■■■□□ 2.36
SMAD5-207ENST00000511116 ECE1P42892 770 aa29.81■■■□□ 2.36
SMAD5-207ENST00000511116 SF3B3Q15393 1217 aaKnown RBP29.81■■■□□ 2.36
SMAD5-207ENST00000511116 DBF4Q9UBU7 674 aaPredicted RBP29.81■■■□□ 2.36
SMAD5-207ENST00000511116 YDJCA8MPS7 323 aa29.8■■■□□ 2.36
SMAD5-207ENST00000511116 TNIP1Q15025 636 aa29.8■■■□□ 2.36
SMAD5-207ENST00000511116 ANKRD13DQ6ZTN6 518 aa29.8■■■□□ 2.36
SMAD5-207ENST00000511116 ZC3H15Q8WU90 426 aaKnown RBP29.8■■■□□ 2.36
SMAD5-207ENST00000511116 TRIM28Q13263 835 aaKnown RBP29.79■■■□□ 2.36
SMAD5-207ENST00000511116 CFAP44Q96MT7 982 aa29.79■■■□□ 2.36
SMAD5-207ENST00000511116 RAD17O75943 681 aa29.78■■■□□ 2.36
SMAD5-207ENST00000511116 HIRAP54198 1017 aaPredicted RBP29.78■■■□□ 2.36
SMAD5-207ENST00000511116 ADAMTS8Q9UP79 889 aa29.78■■■□□ 2.36
SMAD5-207ENST00000511116 COL4A1P02462 1669 aa29.77■■■□□ 2.36
SMAD5-207ENST00000511116 DDX10Q13206 875 aaKnown RBP29.77■■■□□ 2.36
SMAD5-207ENST00000511116 CYP4F22Q6NT55 531 aa29.77■■■□□ 2.36
SMAD5-207ENST00000511116 HHIPL1Q96JK4 782 aa29.77■■■□□ 2.36
SMAD5-207ENST00000511116 LAS1LQ9Y4W2 734 aaKnown RBP29.77■■■□□ 2.36
SMAD5-207ENST00000511116 WDR43Q15061 677 aaKnown RBP eCLIP29.76■■■□□ 2.35
SMAD5-207ENST00000511116 SAPCD2Q86UD0 394 aa29.76■■■□□ 2.35
SMAD5-207ENST00000511116 FAM89AQ96GI7 184 aa29.76■■■□□ 2.35
SMAD5-207ENST00000511116 GPR101Q96P66 508 aaPredicted RBP29.76■■■□□ 2.35
SMAD5-207ENST00000511116 HYPKQ9NX55 129 aa29.76■■■□□ 2.35
SMAD5-207ENST00000511116 TRPM4Q8TD43 1214 aa29.75■■■□□ 2.35
SMAD5-207ENST00000511116 CELF1Q92879 486 aaKnown RBP29.75■■■□□ 2.35
SMAD5-207ENST00000511116 GLIS2Q9BZE0 524 aaPredicted RBP29.75■■■□□ 2.35
SMAD5-207ENST00000511116 ZNF853P0CG23 659 aa29.74■■■□□ 2.35
SMAD5-207ENST00000511116 MAP2K2P36507 400 aa29.74■■■□□ 2.35
SMAD5-207ENST00000511116 DUSP27Q5VZP5 1158 aa29.74■■■□□ 2.35
SMAD5-207ENST00000511116 BCL2L13Q9BXK5 485 aa29.74■■■□□ 2.35
SMAD5-207ENST00000511116 CNOT7Q9UIV1 285 aaKnown RBP29.74■■■□□ 2.35
SMAD5-207ENST00000511116 ATP5J2-PTCD1G3V325 749 aa29.73■■■□□ 2.35
SMAD5-207ENST00000511116 CELF2O95319 508 aaKnown RBP29.73■■■□□ 2.35
SMAD5-207ENST00000511116 DPF2Q92785 391 aa29.73■■■□□ 2.35
SMAD5-207ENST00000511116 MBIPQ9NS73 344 aa29.72■■■□□ 2.35
SMAD5-207ENST00000511116 SHTN1A0MZ66 631 aa29.71■■■□□ 2.35
SMAD5-207ENST00000511116 WASHC4Q2M389 1173 aa29.71■■■□□ 2.35
SMAD5-207ENST00000511116 CDC37L1Q7L3B6 337 aa29.71■■■□□ 2.35
SMAD5-207ENST00000511116 ZNF428Q96B54 188 aa29.71■■■□□ 2.35
SMAD5-207ENST00000511116 PAXIP1Q6ZW49 1069 aaPredicted RBP29.7■■■□□ 2.35
SMAD5-207ENST00000511116 POLLQ9UGP5 575 aa29.7■■■□□ 2.35
SMAD5-207ENST00000511116 MICALL2Q8IY33 904 aa29.69■■■□□ 2.34
SMAD5-207ENST00000511116 NSFL1CQ9UNZ2 370 aaKnown RBP29.69■■■□□ 2.34
SMAD5-207ENST00000511116 H7C1D1 291 aa29.68■■■□□ 2.34
SMAD5-207ENST00000511116 PSMD14O00487 310 aa29.68■■■□□ 2.34
SMAD5-207ENST00000511116 IRS4O14654 1257 aaPredicted RBP29.68■■■□□ 2.34
SMAD5-207ENST00000511116 GPSM2P81274 684 aa29.68■■■□□ 2.34
SMAD5-207ENST00000511116 AOC2O75106 756 aa29.67■■■□□ 2.34
SMAD5-207ENST00000511116 ABHD8Q96I13 439 aa29.67■■■□□ 2.34
SMAD5-207ENST00000511116 BEGAINQ9BUH8 593 aa29.67■■■□□ 2.34
SMAD5-207ENST00000511116 ZBTB12Q9Y330 459 aaPredicted RBP29.67■■■□□ 2.34
SMAD5-207ENST00000511116 RPS8P62241 208 aaKnown RBP29.66■■■□□ 2.34
SMAD5-207ENST00000511116 ZBTB38Q8NAP3 1195 aaPredicted RBP29.66■■■□□ 2.34
SMAD5-207ENST00000511116 DBNDD1Q9H9R9 158 aa29.66■■■□□ 2.34
SMAD5-207ENST00000511116 IFT57Q9NWB7 429 aa29.66■■■□□ 2.34
SMAD5-207ENST00000511116 PODXL2Q9NZ53 605 aa29.66■■■□□ 2.34
SMAD5-207ENST00000511116 RTL9Q8NET4 1388 aa29.65■■■□□ 2.34
SMAD5-207ENST00000511116 RPS12P25398 132 aaKnown RBP29.65■■■□□ 2.34
SMAD5-207ENST00000511116 GRM1Q13255 1194 aa29.65■■■□□ 2.34
SMAD5-207ENST00000511116 PRKRIP1Q9H875 184 aaPredicted RBP29.65■■■□□ 2.34
SMAD5-207ENST00000511116 CA12O43570 354 aa29.64■■■□□ 2.34
SMAD5-207ENST00000511116 TBC1D16Q8TBP0 767 aa29.64■■■□□ 2.34
SMAD5-207ENST00000511116 EYA3Q99504 573 aa29.64■■■□□ 2.34
SMAD5-207ENST00000511116 SCN9AQ15858 1988 aa29.63■■■□□ 2.33
SMAD5-207ENST00000511116 C6orf229H3BNL8 230 aa29.63■■■□□ 2.33
SMAD5-207ENST00000511116 ECE2O60344 883 aa29.63■■■□□ 2.33
SMAD5-207ENST00000511116 BRPF1P55201 1214 aaPredicted RBP29.63■■■□□ 2.33
SMAD5-207ENST00000511116 RTL5Q5HYW3 569 aaPredicted RBP29.63■■■□□ 2.33
SMAD5-207ENST00000511116 GOLGA2Q08379 1002 aa29.62■■■□□ 2.33
SMAD5-207ENST00000511116 SAMD7Q7Z3H4 446 aa29.62■■■□□ 2.33
SMAD5-207ENST00000511116 PHAXQ9H814 394 aaKnown RBP29.62■■■□□ 2.33
SMAD5-207ENST00000511116 ZNF609O15014 1411 aa29.62■■■□□ 2.33
SMAD5-207ENST00000511116 RIMBP2O15034 1052 aa29.61■■■□□ 2.33
SMAD5-207ENST00000511116 EGFRP00533 1210 aa29.61■■■□□ 2.33
SMAD5-207ENST00000511116 HSP90B1P14625 803 aaKnown RBP29.61■■■□□ 2.33
SMAD5-207ENST00000511116 GNAI1P63096 354 aa29.61■■■□□ 2.33
SMAD5-207ENST00000511116 RIC3Q7Z5B4 369 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms