RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 BEND3Q5T5X7 828 aa17.78■□□□□ 0.44
DDX41-212ENST00000511040 CELF1Q92879 486 aaKnown RBP17.78■□□□□ 0.44
DDX41-212ENST00000511040 SMC4Q9NTJ3 1288 aa17.78■□□□□ 0.44
DDX41-212ENST00000511040 ATP6V0A2Q9Y487 856 aa17.78■□□□□ 0.44
DDX41-212ENST00000511040 CDHR2Q9BYE9 1310 aa17.77■□□□□ 0.44
DDX41-212ENST00000511040 H7C1W4 665 aa17.77■□□□□ 0.44
DDX41-212ENST00000511040 BBOX1O75936 387 aa17.77■□□□□ 0.44
DDX41-212ENST00000511040 SEC31BQ9NQW1 1179 aa17.77■□□□□ 0.44
DDX41-212ENST00000511040 TIAM2Q8IVF5 1701 aa17.76■□□□□ 0.43
DDX41-212ENST00000511040 SNED1Q8TER0 1413 aa17.76■□□□□ 0.43
DDX41-212ENST00000511040 HSP90B1P14625 803 aaKnown RBP17.76■□□□□ 0.43
DDX41-212ENST00000511040 CC2D2BQ6DHV5 1058 aa17.76■□□□□ 0.43
DDX41-212ENST00000511040 TMX4Q9H1E5 349 aaPredicted RBP17.76■□□□□ 0.43
DDX41-212ENST00000511040 CTSWP56202 376 aa17.75■□□□□ 0.43
DDX41-212ENST00000511040 ALDH1L2Q3SY69 923 aa17.75■□□□□ 0.43
DDX41-212ENST00000511040 CCDC152Q4G0S7 254 aa17.75■□□□□ 0.43
DDX41-212ENST00000511040 NMRK2Q9NPI5 230 aa17.75■□□□□ 0.43
DDX41-212ENST00000511040 CASP7P55210 303 aa17.74■□□□□ 0.43
DDX41-212ENST00000511040 SP8Q8IXZ3 490 aa17.74■□□□□ 0.43
DDX41-212ENST00000511040 DICER1Q9UPY3 1922 aaKnown RBP17.73■□□□□ 0.43
DDX41-212ENST00000511040 CT47B1P0C2W7 299 aaPredicted RBP17.73■□□□□ 0.43
DDX41-212ENST00000511040 IARSP41252 1262 aaKnown RBP17.73■□□□□ 0.43
DDX41-212ENST00000511040 RPS8P62241 208 aaKnown RBP17.73■□□□□ 0.43
DDX41-212ENST00000511040 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
DDX41-212ENST00000511040 PSMD1Q99460 953 aa17.73■□□□□ 0.43
DDX41-212ENST00000511040 PTPRCP08575 1304 aa17.72■□□□□ 0.43
DDX41-212ENST00000511040 RARSP54136 660 aaKnown RBP17.72■□□□□ 0.43
DDX41-212ENST00000511040 DPP8Q6V1X1 898 aaPredicted RBP17.72■□□□□ 0.43
DDX41-212ENST00000511040 MPNDQ8N594 471 aa17.72■□□□□ 0.43
DDX41-212ENST00000511040 SRCIN1Q9C0H9 1055 aa17.72■□□□□ 0.43
DDX41-212ENST00000511040 GREM2Q9H772 168 aa17.72■□□□□ 0.43
DDX41-212ENST00000511040 NOB1Q9ULX3 412 aaKnown RBP17.72■□□□□ 0.43
DDX41-212ENST00000511040 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
DDX41-212ENST00000511040 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
DDX41-212ENST00000511040 ZC3H4Q9UPT8 1303 aaKnown RBP17.72■□□□□ 0.43
DDX41-212ENST00000511040 GRM8O00222 908 aa17.71■□□□□ 0.43
DDX41-212ENST00000511040 ALDH1L1O75891 902 aa17.71■□□□□ 0.43
DDX41-212ENST00000511040 GRIPAP1Q4V328 841 aa17.71■□□□□ 0.43
DDX41-212ENST00000511040 C9orf78Q9NZ63 289 aaPredicted RBP17.71■□□□□ 0.43
DDX41-212ENST00000511040 MYH3P11055 1940 aa17.7■□□□□ 0.42
DDX41-212ENST00000511040 GLTPD2A6NH11 291 aa17.7■□□□□ 0.42
DDX41-212ENST00000511040 GPSM2P81274 684 aa17.7■□□□□ 0.42
DDX41-212ENST00000511040 TMC4Q7Z404 712 aa17.7■□□□□ 0.42
DDX41-212ENST00000511040 PLA2G12BQ9BX93 195 aa17.7■□□□□ 0.42
DDX41-212ENST00000511040 RRAGCQ9HB90 399 aa17.7■□□□□ 0.42
DDX41-212ENST00000511040 COL4A5P29400 1685 aa17.7■□□□□ 0.42
DDX41-212ENST00000511040 KIF3CO14782 793 aa17.69■□□□□ 0.42
DDX41-212ENST00000511040 PPIP5K2O43314 1243 aa17.69■□□□□ 0.42
DDX41-212ENST00000511040 AOC3Q16853 763 aa17.69■□□□□ 0.42
DDX41-212ENST00000511040 FAM161AQ3B820 660 aa17.69■□□□□ 0.42
DDX41-212ENST00000511040 IFFO2Q5TF58 517 aa17.69■□□□□ 0.42
DDX41-212ENST00000511040 ANKRD18AQ8IVF6 992 aa17.69■□□□□ 0.42
DDX41-212ENST00000511040 LARGE2Q8N3Y3 721 aa17.69■□□□□ 0.42
DDX41-212ENST00000511040 NSFL1CQ9UNZ2 370 aaKnown RBP17.69■□□□□ 0.42
DDX41-212ENST00000511040 ZNF541Q9H0D2 1346 aa17.69■□□□□ 0.42
DDX41-212ENST00000511040 LRRC37AA6NMS7 1700 aa17.68■□□□□ 0.42
DDX41-212ENST00000511040 DDNO94850 711 aaPredicted RBP17.68■□□□□ 0.42
DDX41-212ENST00000511040 FOXO4P98177 505 aa17.68■□□□□ 0.42
DDX41-212ENST00000511040 EPHA10Q5JZY3 1008 aa17.68■□□□□ 0.42
DDX41-212ENST00000511040 DPY19L2Q6NUT2 758 aa17.68■□□□□ 0.42
DDX41-212ENST00000511040 RTFDC1Q9BY42 306 aaPredicted RBP17.68■□□□□ 0.42
DDX41-212ENST00000511040 CHMP3Q9Y3E7 222 aa17.68■□□□□ 0.42
DDX41-212ENST00000511040 BCAR3O75815 825 aa17.67■□□□□ 0.42
DDX41-212ENST00000511040 SUPT20HQ8NEM7 779 aa17.67■□□□□ 0.42
DDX41-212ENST00000511040 JDP2Q8WYK2 163 aa17.67■□□□□ 0.42
DDX41-212ENST00000511040 GPR101Q96P66 508 aaPredicted RBP17.67■□□□□ 0.42
DDX41-212ENST00000511040 CDC5LQ99459 802 aaKnown RBP17.67■□□□□ 0.42
DDX41-212ENST00000511040 SPEF2Q9C093 1822 aa17.67■□□□□ 0.42
DDX41-212ENST00000511040 RTL9Q8NET4 1388 aa17.66■□□□□ 0.42
DDX41-212ENST00000511040 DUOX1Q9NRD9 1551 aa17.66■□□□□ 0.42
DDX41-212ENST00000511040 C6orf229H3BNL8 230 aa17.66■□□□□ 0.42
DDX41-212ENST00000511040 CSF1RP07333 972 aa17.66■□□□□ 0.42
DDX41-212ENST00000511040 NBPF7P0C2Y1 421 aaPredicted RBP17.66■□□□□ 0.42
DDX41-212ENST00000511040 ITGA6P23229 1130 aa17.66■□□□□ 0.42
DDX41-212ENST00000511040 NIM1KQ8IY84 436 aa17.66■□□□□ 0.42
DDX41-212ENST00000511040 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
DDX41-212ENST00000511040 POLLQ9UGP5 575 aa17.66■□□□□ 0.42
DDX41-212ENST00000511040 FZD9O00144 591 aa17.65■□□□□ 0.42
DDX41-212ENST00000511040 RIMBP2O15034 1052 aa17.65■□□□□ 0.42
DDX41-212ENST00000511040 BRPF1P55201 1214 aaPredicted RBP17.65■□□□□ 0.42
DDX41-212ENST00000511040 C1QTNF8P60827 252 aa17.65■□□□□ 0.42
DDX41-212ENST00000511040 LMBR1LQ6UX01 489 aa17.65■□□□□ 0.42
DDX41-212ENST00000511040 ANKIB1Q9P2G1 1089 aa17.65■□□□□ 0.42
DDX41-212ENST00000511040 TBC1D16Q8TBP0 767 aa17.64■□□□□ 0.41
DDX41-212ENST00000511040 FRAT1Q92837 279 aaPredicted RBP17.64■□□□□ 0.41
DDX41-212ENST00000511040 API5Q9BZZ5 524 aaKnown RBP17.64■□□□□ 0.41
DDX41-212ENST00000511040 ANKRD18BA2A2Z9 1011 aa17.63■□□□□ 0.41
DDX41-212ENST00000511040 POTECB2RU33 542 aa17.63■□□□□ 0.41
DDX41-212ENST00000511040 UFL1O94874 794 aa17.63■□□□□ 0.41
DDX41-212ENST00000511040 IGHMBP2P38935 993 aaKnown RBP17.63■□□□□ 0.41
DDX41-212ENST00000511040 EIF6P56537 245 aaKnown RBP17.63■□□□□ 0.41
DDX41-212ENST00000511040 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
DDX41-212ENST00000511040 C16orf71Q8IYS4 520 aaPredicted RBP17.63■□□□□ 0.41
DDX41-212ENST00000511040 KAZALD1Q96I82 304 aa17.63■□□□□ 0.41
DDX41-212ENST00000511040 TNNQ9UQP3 1299 aa17.63■□□□□ 0.41
DDX41-212ENST00000511040 GJA3Q9Y6H8 435 aa17.63■□□□□ 0.41
DDX41-212ENST00000511040 KIF16BQ96L93 1317 aa17.63■□□□□ 0.41
DDX41-212ENST00000511040 LTBP1Q14766 1721 aa17.62■□□□□ 0.41
DDX41-212ENST00000511040 VEGFAP15692 232 aaPredicted RBP17.62■□□□□ 0.41
DDX41-212ENST00000511040 CCT4P50991 539 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms