RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 GNAI1P63096 354 aa11.24□□□□□ -0.61
PDGFC-206ENST00000510982 CXCL9Q07325 125 aa11.24□□□□□ -0.61
PDGFC-206ENST00000510982 DEFB115Q30KQ5 88 aa11.24□□□□□ -0.61
PDGFC-206ENST00000510982 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
PDGFC-206ENST00000510982 RIC3Q7Z5B4 369 aa11.24□□□□□ -0.61
PDGFC-206ENST00000510982 ISCA1Q9BUE6 129 aa11.24□□□□□ -0.61
PDGFC-206ENST00000510982 ZNF853P0CG23 659 aa11.23□□□□□ -0.61
PDGFC-206ENST00000510982 CALD1Q05682 793 aaKnown RBP11.23□□□□□ -0.61
PDGFC-206ENST00000510982 USP50Q70EL3 339 aaPredicted RBP11.23□□□□□ -0.61
PDGFC-206ENST00000510982 TMC4Q7Z404 712 aa11.23□□□□□ -0.61
PDGFC-206ENST00000510982 IFT57Q9NWB7 429 aa11.23□□□□□ -0.61
PDGFC-206ENST00000510982 ABT1Q9ULW3 272 aaKnown RBP11.23□□□□□ -0.61
PDGFC-206ENST00000510982 NSFL1CQ9UNZ2 370 aaKnown RBP11.23□□□□□ -0.61
PDGFC-206ENST00000510982 CNTNAP1P78357 1384 aa11.23□□□□□ -0.61
PDGFC-206ENST00000510982 COL4A5P29400 1685 aa11.23□□□□□ -0.61
PDGFC-206ENST00000510982 CAPN15O75808 1086 aa11.22□□□□□ -0.61
PDGFC-206ENST00000510982 RAD17O75943 681 aa11.22□□□□□ -0.61
PDGFC-206ENST00000510982 KIAA2012Q0VF49 1180 aa11.22□□□□□ -0.61
PDGFC-206ENST00000510982 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
PDGFC-206ENST00000510982 TNIP1Q15025 636 aa11.22□□□□□ -0.61
PDGFC-206ENST00000510982 SF3B3Q15393 1217 aaKnown RBP11.22□□□□□ -0.61
PDGFC-206ENST00000510982 CIAPIN1Q6FI81 312 aa11.22□□□□□ -0.61
PDGFC-206ENST00000510982 BCL2L13Q9BXK5 485 aa11.22□□□□□ -0.61
PDGFC-206ENST00000510982 PHAXQ9H814 394 aaKnown RBP11.22□□□□□ -0.61
PDGFC-206ENST00000510982 ADARB2Q9NS39 739 aaKnown RBP11.22□□□□□ -0.61
PDGFC-206ENST00000510982 GPRC5DQ9NZD1 345 aa11.22□□□□□ -0.61
PDGFC-206ENST00000510982 IRS4O14654 1257 aaPredicted RBP11.21□□□□□ -0.61
PDGFC-206ENST00000510982 GMPSP49915 693 aaPredicted RBP11.21□□□□□ -0.61
PDGFC-206ENST00000510982 FMR1Q06787 632 aaKnown RBP eCLIP11.21□□□□□ -0.61
PDGFC-206ENST00000510982 GOLGA2Q08379 1002 aa11.21□□□□□ -0.61
PDGFC-206ENST00000510982 WASHC4Q2M389 1173 aa11.21□□□□□ -0.61
PDGFC-206ENST00000510982 CELF1Q92879 486 aaKnown RBP11.21□□□□□ -0.61
PDGFC-206ENST00000510982 AIDAQ96BJ3 306 aa11.21□□□□□ -0.61
PDGFC-206ENST00000510982 RASSF10A6NK89 507 aa11.2□□□□□ -0.62
PDGFC-206ENST00000510982 C6orf229H3BNL8 230 aa11.2□□□□□ -0.62
PDGFC-206ENST00000510982 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
PDGFC-206ENST00000510982 FOXN1O15353 648 aa11.2□□□□□ -0.62
PDGFC-206ENST00000510982 HSP90B1P14625 803 aaKnown RBP11.2□□□□□ -0.62
PDGFC-206ENST00000510982 RPS8P62241 208 aaKnown RBP11.2□□□□□ -0.62
PDGFC-206ENST00000510982 ZBTB38Q8NAP3 1195 aaPredicted RBP11.2□□□□□ -0.62
PDGFC-206ENST00000510982 C8orf58Q8NAV2 365 aa11.2□□□□□ -0.62
PDGFC-206ENST00000510982 MYD88Q99836 296 aa11.2□□□□□ -0.62
PDGFC-206ENST00000510982 CHMP4AQ9BY43 222 aa11.2□□□□□ -0.62
PDGFC-206ENST00000510982 WDR33Q9C0J8 1336 aaKnown RBP11.19□□□□□ -0.62
PDGFC-206ENST00000510982 H7C1D1 291 aa11.19□□□□□ -0.62
PDGFC-206ENST00000510982 TRAF5O00463 557 aa11.19□□□□□ -0.62
PDGFC-206ENST00000510982 GPSM2P81274 684 aa11.19□□□□□ -0.62
PDGFC-206ENST00000510982 CCDC30Q5VVM6 783 aa11.19□□□□□ -0.62
PDGFC-206ENST00000510982 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
PDGFC-206ENST00000510982 CNOT7Q9UIV1 285 aaKnown RBP11.19□□□□□ -0.62
PDGFC-206ENST00000510982 TAF1P21675 1872 aa11.19□□□□□ -0.62
PDGFC-206ENST00000510982 ANKRD36CQ5JPF3 1778 aa11.18□□□□□ -0.62
PDGFC-206ENST00000510982 PCNTO95613 3336 aa11.18□□□□□ -0.62
PDGFC-206ENST00000510982 YDJCA8MPS7 323 aa11.18□□□□□ -0.62
PDGFC-206ENST00000510982 DDX58O95786 925 aaKnown RBP11.18□□□□□ -0.62
PDGFC-206ENST00000510982 CTCFP49711 727 aaPredicted RBP11.18□□□□□ -0.62
PDGFC-206ENST00000510982 CST9Q5W186 159 aa11.18□□□□□ -0.62
PDGFC-206ENST00000510982 CCDC191Q8NCU4 936 aa11.18□□□□□ -0.62
PDGFC-206ENST00000510982 JARID2Q92833 1246 aaPredicted RBP11.18□□□□□ -0.62
PDGFC-206ENST00000510982 DBNDD1Q9H9R9 158 aa11.18□□□□□ -0.62
PDGFC-206ENST00000510982 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
PDGFC-206ENST00000510982 POLLQ9UGP5 575 aa11.18□□□□□ -0.62
PDGFC-206ENST00000510982 ADAMTSL1Q8N6G6 1762 aa11.18□□□□□ -0.62
PDGFC-206ENST00000510982 LTBP1Q14766 1721 aa11.18□□□□□ -0.62
PDGFC-206ENST00000510982 ECE1P42892 770 aa11.17□□□□□ -0.62
PDGFC-206ENST00000510982 HIRAP54198 1017 aaPredicted RBP11.17□□□□□ -0.62
PDGFC-206ENST00000510982 MAP2K1Q02750 393 aaPredicted RBP11.17□□□□□ -0.62
PDGFC-206ENST00000510982 GRM1Q13255 1194 aa11.17□□□□□ -0.62
PDGFC-206ENST00000510982 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
PDGFC-206ENST00000510982 CCDC184Q52MB2 194 aa11.17□□□□□ -0.62
PDGFC-206ENST00000510982 TSPYL6Q8N831 410 aa11.17□□□□□ -0.62
PDGFC-206ENST00000510982 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
PDGFC-206ENST00000510982 EYA3Q99504 573 aa11.17□□□□□ -0.62
PDGFC-206ENST00000510982 METTL22Q9BUU2 404 aaPredicted RBP11.17□□□□□ -0.62
PDGFC-206ENST00000510982 GLIS2Q9BZE0 524 aaPredicted RBP11.17□□□□□ -0.62
PDGFC-206ENST00000510982 ZC3H12CQ9C0D7 883 aaKnown RBP11.17□□□□□ -0.62
PDGFC-206ENST00000510982 SEC31BQ9NQW1 1179 aa11.17□□□□□ -0.62
PDGFC-206ENST00000510982 CWC25Q9NXE8 425 aaPredicted RBP11.17□□□□□ -0.62
PDGFC-206ENST00000510982 PGAP2Q9UHJ9 254 aa11.17□□□□□ -0.62
PDGFC-206ENST00000510982 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
PDGFC-206ENST00000510982 LAMB2P55268 1798 aa11.17□□□□□ -0.62
PDGFC-206ENST00000510982 CDHR2Q9BYE9 1310 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 SHTN1A0MZ66 631 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 G3V3G9 751 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 PSMD14O00487 310 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 PDE8AO60658 829 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 CELF2O95319 508 aaKnown RBP11.16□□□□□ -0.62
PDGFC-206ENST00000510982 PCCAP05165 728 aaPredicted RBP11.16□□□□□ -0.62
PDGFC-206ENST00000510982 CCDC152Q4G0S7 254 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 CYP4F22Q6NT55 531 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 CDC37L1Q7L3B6 337 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 MICALL2Q8IY33 904 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 TBC1D16Q8TBP0 767 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 DPF2Q92785 391 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 CAPNS2Q96L46 248 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 GPR101Q96P66 508 aaPredicted RBP11.16□□□□□ -0.62
PDGFC-206ENST00000510982 CCDC85AQ96PX6 553 aaPredicted RBP11.16□□□□□ -0.62
PDGFC-206ENST00000510982 PRDM10Q9NQV6 1147 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 KCNQ5Q9NR82 932 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms