RNA–Protein interactions for RNA: ENST00000510689.5

SPOCK1-209, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-209ENST00000510689 LARGE2Q8N3Y3 721 aa28.28■■■□□ 2.12
SPOCK1-209ENST00000510689 HACL1Q9UJ83 578 aa28.28■■■□□ 2.12
SPOCK1-209ENST00000510689 LDHDQ86WU2 507 aa28.27■■■□□ 2.12
SPOCK1-209ENST00000510689 ZBTB38Q8NAP3 1195 aaPredicted RBP28.26■■■□□ 2.11
SPOCK1-209ENST00000510689 CHMP4AQ9BY43 222 aa28.26■■■□□ 2.11
SPOCK1-209ENST00000510689 PASKQ96RG2 1323 aa28.25■■■□□ 2.11
SPOCK1-209ENST00000510689 AOC3Q16853 763 aa28.25■■■□□ 2.11
SPOCK1-209ENST00000510689 METTL22Q9BUU2 404 aaPredicted RBP28.25■■■□□ 2.11
SPOCK1-209ENST00000510689 IRS4O14654 1257 aaPredicted RBP28.24■■■□□ 2.11
SPOCK1-209ENST00000510689 PPIP5K2O43314 1243 aa28.24■■■□□ 2.11
SPOCK1-209ENST00000510689 EPHX2P34913 555 aa28.24■■■□□ 2.11
SPOCK1-209ENST00000510689 EIF6P56537 245 aaKnown RBP28.24■■■□□ 2.11
SPOCK1-209ENST00000510689 RTL5Q5HYW3 569 aaPredicted RBP28.24■■■□□ 2.11
SPOCK1-209ENST00000510689 TMC4Q7Z404 712 aa28.24■■■□□ 2.11
SPOCK1-209ENST00000510689 MPNDQ8N594 471 aa28.24■■■□□ 2.11
SPOCK1-209ENST00000510689 CCDC191Q8NCU4 936 aa28.24■■■□□ 2.11
SPOCK1-209ENST00000510689 CELF1Q92879 486 aaKnown RBP28.24■■■□□ 2.11
SPOCK1-209ENST00000510689 MYD88Q99836 296 aa28.24■■■□□ 2.11
SPOCK1-209ENST00000510689 ITGBL1O95965 494 aaPredicted RBP28.23■■■□□ 2.11
SPOCK1-209ENST00000510689 SCNN1DP51172 638 aa28.23■■■□□ 2.11
SPOCK1-209ENST00000510689 SUPT20HQ8NEM7 779 aa28.23■■■□□ 2.11
SPOCK1-209ENST00000510689 PCCAP05165 728 aaPredicted RBP28.22■■■□□ 2.11
SPOCK1-209ENST00000510689 KIAA2012Q0VF49 1180 aa28.22■■■□□ 2.11
SPOCK1-209ENST00000510689 DPP8Q6V1X1 898 aaPredicted RBP28.22■■■□□ 2.11
SPOCK1-209ENST00000510689 TWISTNBQ3B726 338 aaPredicted RBP28.21■■■□□ 2.11
SPOCK1-209ENST00000510689 NIM1KQ8IY84 436 aa28.21■■■□□ 2.11
SPOCK1-209ENST00000510689 TMX4Q9H1E5 349 aaPredicted RBP28.21■■■□□ 2.11
SPOCK1-209ENST00000510689 KSR2Q6VAB6 950 aa28.2■■■□□ 2.1
SPOCK1-209ENST00000510689 WDR63Q8IWG1 891 aa28.2■■■□□ 2.1
SPOCK1-209ENST00000510689 MAP3K2Q9Y2U5 619 aa28.2■■■□□ 2.1
SPOCK1-209ENST00000510689 GJA3Q9Y6H8 435 aa28.2■■■□□ 2.1
SPOCK1-209ENST00000510689 MYH3P11055 1940 aa28.2■■■□□ 2.1
SPOCK1-209ENST00000510689 DDX58O95786 925 aaKnown RBP28.19■■■□□ 2.1
SPOCK1-209ENST00000510689 IGKV5-2P06315 115 aa28.19■■■□□ 2.1
SPOCK1-209ENST00000510689 CXCL9Q07325 125 aa28.19■■■□□ 2.1
SPOCK1-209ENST00000510689 G2E3Q7L622 706 aa28.19■■■□□ 2.1
SPOCK1-209ENST00000510689 PNMA8AQ86V59 439 aaPredicted RBP28.19■■■□□ 2.1
SPOCK1-209ENST00000510689 ZNRF3Q9ULT6 936 aa28.19■■■□□ 2.1
SPOCK1-209ENST00000510689 FANCIQ9NVI1 1328 aa28.18■■■□□ 2.1
SPOCK1-209ENST00000510689 PI4KAP2A4QPH2 592 aa28.18■■■□□ 2.1
SPOCK1-209ENST00000510689 EPS15P42566 896 aa28.18■■■□□ 2.1
SPOCK1-209ENST00000510689 PI4KAP1Q8N8J0 262 aa28.18■■■□□ 2.1
SPOCK1-209ENST00000510689 CWC25Q9NXE8 425 aaPredicted RBP28.18■■■□□ 2.1
SPOCK1-209ENST00000510689 EAPPQ56P03 285 aaPredicted RBP28.17■■■□□ 2.1
SPOCK1-209ENST00000510689 CREBZFQ9NS37 354 aa28.17■■■□□ 2.1
SPOCK1-209ENST00000510689 RPS8P62241 208 aaKnown RBP28.16■■■□□ 2.1
SPOCK1-209ENST00000510689 JARID2Q92833 1246 aaPredicted RBP28.16■■■□□ 2.1
SPOCK1-209ENST00000510689 SPINK5Q9NQ38 1064 aaPredicted RBP28.16■■■□□ 2.1
SPOCK1-209ENST00000510689 SEC31BQ9NQW1 1179 aa28.15■■■□□ 2.1
SPOCK1-209ENST00000510689 CDHR2Q9BYE9 1310 aa28.15■■■□□ 2.1
SPOCK1-209ENST00000510689 YDJCA8MPS7 323 aa28.14■■■□□ 2.1
SPOCK1-209ENST00000510689 PDE8AO60658 829 aa28.14■■■□□ 2.1
SPOCK1-209ENST00000510689 VAMP4O75379 141 aa28.14■■■□□ 2.1
SPOCK1-209ENST00000510689 STK31Q9BXU1 1019 aa28.14■■■□□ 2.1
SPOCK1-209ENST00000510689 POLLQ9UGP5 575 aa28.14■■■□□ 2.1
SPOCK1-209ENST00000510689 SLC4A2P04920 1241 aa28.13■■■□□ 2.09
SPOCK1-209ENST00000510689 GPSM2P81274 684 aa28.13■■■□□ 2.09
SPOCK1-209ENST00000510689 GPRC5DQ9NZD1 345 aa28.13■■■□□ 2.09
SPOCK1-209ENST00000510689 SCN9AQ15858 1988 aa28.12■■■□□ 2.09
SPOCK1-209ENST00000510689 HSP90B1P14625 803 aaKnown RBP28.12■■■□□ 2.09
SPOCK1-209ENST00000510689 MAP1SQ66K74 1059 aaPredicted RBP28.12■■■□□ 2.09
SPOCK1-209ENST00000510689 CNTROBQ8N137 903 aa28.12■■■□□ 2.09
SPOCK1-209ENST00000510689 SALL2Q9Y467 1007 aaPredicted RBP28.12■■■□□ 2.09
SPOCK1-209ENST00000510689 PODXL2Q9NZ53 605 aa28.11■■■□□ 2.09
SPOCK1-209ENST00000510689 NSFL1CQ9UNZ2 370 aaKnown RBP28.11■■■□□ 2.09
SPOCK1-209ENST00000510689 CLEC11AQ9Y240 323 aa28.11■■■□□ 2.09
SPOCK1-209ENST00000510689 NEURL1BA8MQ27 555 aa28.1■■■□□ 2.09
SPOCK1-209ENST00000510689 LMOD1P29536 600 aaPredicted RBP28.1■■■□□ 2.09
SPOCK1-209ENST00000510689 CIAPIN1Q6FI81 312 aa28.1■■■□□ 2.09
SPOCK1-209ENST00000510689 USP50Q70EL3 339 aaPredicted RBP28.1■■■□□ 2.09
SPOCK1-209ENST00000510689 TRPM7Q96QT4 1865 aa28.1■■■□□ 2.09
SPOCK1-209ENST00000510689 GMPSP49915 693 aaPredicted RBP28.09■■■□□ 2.09
SPOCK1-209ENST00000510689 EXOSC9Q06265 439 aaKnown RBP28.09■■■□□ 2.09
SPOCK1-209ENST00000510689 CWF19L2Q2TBE0 894 aaKnown RBP28.09■■■□□ 2.09
SPOCK1-209ENST00000510689 CCDC152Q4G0S7 254 aa28.09■■■□□ 2.09
SPOCK1-209ENST00000510689 H7C1W4 665 aa28.08■■■□□ 2.09
SPOCK1-209ENST00000510689 RAD17O75943 681 aa28.08■■■□□ 2.09
SPOCK1-209ENST00000510689 FLIIQ13045 1269 aa28.08■■■□□ 2.09
SPOCK1-209ENST00000510689 WASHC4Q2M389 1173 aa28.08■■■□□ 2.09
SPOCK1-209ENST00000510689 TBC1D16Q8TBP0 767 aa28.08■■■□□ 2.09
SPOCK1-209ENST00000510689 FAM9BQ8IZU0 186 aa28.07■■■□□ 2.08
SPOCK1-209ENST00000510689 ZNF521Q96K83 1311 aa28.07■■■□□ 2.08
SPOCK1-209ENST00000510689 TTLL11Q8NHH1 800 aa28.06■■■□□ 2.08
SPOCK1-209ENST00000510689 ADARB2Q9NS39 739 aaKnown RBP28.06■■■□□ 2.08
SPOCK1-209ENST00000510689 CNTNAP1P78357 1384 aa28.06■■■□□ 2.08
SPOCK1-209ENST00000510689 PSME4Q14997 1843 aa28.06■■■□□ 2.08
SPOCK1-209ENST00000510689 SPEF2Q9C093 1822 aa28.06■■■□□ 2.08
SPOCK1-209ENST00000510689 TMEM88BA6NKF7 163 aa28.05■■■□□ 2.08
SPOCK1-209ENST00000510689 CASP7P55210 303 aa28.05■■■□□ 2.08
SPOCK1-209ENST00000510689 CTSWP56202 376 aa28.05■■■□□ 2.08
SPOCK1-209ENST00000510689 NEXNQ0ZGT2 675 aa28.05■■■□□ 2.08
SPOCK1-209ENST00000510689 TNIP1Q15025 636 aa28.05■■■□□ 2.08
SPOCK1-209ENST00000510689 PGAP2Q9UHJ9 254 aa28.05■■■□□ 2.08
SPOCK1-209ENST00000510689 POLR2AP24928 1970 aaKnown RBP28.04■■■□□ 2.08
SPOCK1-209ENST00000510689 RTL9Q8NET4 1388 aa28.04■■■□□ 2.08
SPOCK1-209ENST00000510689 C6orf229H3BNL8 230 aa28.04■■■□□ 2.08
SPOCK1-209ENST00000510689 GPR101Q96P66 508 aaPredicted RBP28.04■■■□□ 2.08
SPOCK1-209ENST00000510689 CCDC85AQ96PX6 553 aaPredicted RBP28.04■■■□□ 2.08
SPOCK1-209ENST00000510689 MKRN1Q9UHC7 482 aaKnown RBP28.04■■■□□ 2.08
SPOCK1-209ENST00000510689 FMR1Q06787 632 aaKnown RBP eCLIP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms