RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 IRS4O14654 1257 aaPredicted RBP10.82□□□□□ -0.68
NFKB1-209ENST00000510638 TM4SF1P30408 202 aa10.82□□□□□ -0.68
NFKB1-209ENST00000510638 ST5P78524 1137 aa10.82□□□□□ -0.68
NFKB1-209ENST00000510638 HTRA3P83110 453 aa10.82□□□□□ -0.68
NFKB1-209ENST00000510638 RTL5Q5HYW3 569 aaPredicted RBP10.82□□□□□ -0.68
NFKB1-209ENST00000510638 MSL1Q68DK7 614 aa10.82□□□□□ -0.68
NFKB1-209ENST00000510638 FAM89AQ96GI7 184 aa10.82□□□□□ -0.68
NFKB1-209ENST00000510638 LRRFIP2Q9Y608 721 aaKnown RBP10.82□□□□□ -0.68
NFKB1-209ENST00000510638 N4BP2Q86UW6 1770 aaPredicted RBP10.82□□□□□ -0.68
NFKB1-209ENST00000510638 CDHR2Q9BYE9 1310 aa10.82□□□□□ -0.68
NFKB1-209ENST00000510638 HMMRO75330 724 aa10.81□□□□□ -0.68
NFKB1-209ENST00000510638 NTSR2O95665 410 aa10.81□□□□□ -0.68
NFKB1-209ENST00000510638 SERPINB2P05120 415 aa10.81□□□□□ -0.68
NFKB1-209ENST00000510638 MMP10P09238 476 aa10.81□□□□□ -0.68
NFKB1-209ENST00000510638 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
NFKB1-209ENST00000510638 RPAP2Q8IXW5 612 aaPredicted RBP10.81□□□□□ -0.68
NFKB1-209ENST00000510638 UBR3Q6ZT12 1888 aa10.81□□□□□ -0.68
NFKB1-209ENST00000510638 SCN7AQ01118 1682 aa10.8□□□□□ -0.68
NFKB1-209ENST00000510638 POLRMTO00411 1230 aaKnown RBP10.8□□□□□ -0.68
NFKB1-209ENST00000510638 PDE8AO60658 829 aa10.8□□□□□ -0.68
NFKB1-209ENST00000510638 JARID2Q92833 1246 aaPredicted RBP10.8□□□□□ -0.68
NFKB1-209ENST00000510638 SUCLG2Q96I99 432 aa10.8□□□□□ -0.68
NFKB1-209ENST00000510638 PLA2G12BQ9BX93 195 aa10.8□□□□□ -0.68
NFKB1-209ENST00000510638 C1orf115Q9H7X2 142 aa10.8□□□□□ -0.68
NFKB1-209ENST00000510638 NMRK2Q9NPI5 230 aa10.8□□□□□ -0.68
NFKB1-209ENST00000510638 PPP4R2Q9NY27 417 aa10.8□□□□□ -0.68
NFKB1-209ENST00000510638 GTF3C3Q9Y5Q9 886 aa10.8□□□□□ -0.68
NFKB1-209ENST00000510638 CASP7P55210 303 aa10.79□□□□□ -0.68
NFKB1-209ENST00000510638 DDR1Q08345 913 aa10.79□□□□□ -0.68
NFKB1-209ENST00000510638 ERFEQ4G0M1 354 aa10.79□□□□□ -0.68
NFKB1-209ENST00000510638 NUTM1Q86Y26 1132 aa10.79□□□□□ -0.68
NFKB1-209ENST00000510638 CCDC136Q96JN2 1154 aa10.79□□□□□ -0.68
NFKB1-209ENST00000510638 BICC1Q9H694 974 aaKnown RBP10.79□□□□□ -0.68
NFKB1-209ENST00000510638 PRDM10Q9NQV6 1147 aa10.79□□□□□ -0.68
NFKB1-209ENST00000510638 CHMP3Q9Y3E7 222 aa10.79□□□□□ -0.68
NFKB1-209ENST00000510638 ARFGEF2Q9Y6D5 1785 aa10.79□□□□□ -0.68
NFKB1-209ENST00000510638 HCLS1P14317 486 aaPredicted RBP10.78□□□□□ -0.68
NFKB1-209ENST00000510638 CTSWP56202 376 aa10.78□□□□□ -0.68
NFKB1-209ENST00000510638 CCDC152Q4G0S7 254 aa10.78□□□□□ -0.68
NFKB1-209ENST00000510638 SLC10A5Q5PT55 438 aa10.78□□□□□ -0.68
NFKB1-209ENST00000510638 PRR5LQ6MZQ0 368 aa10.78□□□□□ -0.68
NFKB1-209ENST00000510638 CEP85Q6P2H3 762 aa10.78□□□□□ -0.68
NFKB1-209ENST00000510638 ANKRD44Q8N8A2 993 aa10.78□□□□□ -0.68
NFKB1-209ENST00000510638 SMC1BQ8NDV3 1235 aa10.78□□□□□ -0.68
NFKB1-209ENST00000510638 NLRP3Q96P20 1036 aa10.78□□□□□ -0.68
NFKB1-209ENST00000510638 RWDD1Q9H446 243 aaPredicted RBP10.78□□□□□ -0.68
NFKB1-209ENST00000510638 SRGAP3O43295 1099 aa10.77□□□□□ -0.69
NFKB1-209ENST00000510638 ATP8B2P98198 1209 aa10.77□□□□□ -0.69
NFKB1-209ENST00000510638 MLLT1Q03111 559 aaPredicted RBP10.77□□□□□ -0.69
NFKB1-209ENST00000510638 MTX1Q13505 466 aa10.77□□□□□ -0.69
NFKB1-209ENST00000510638 CCDC57Q2TAC2 916 aa10.77□□□□□ -0.69
NFKB1-209ENST00000510638 RABL6Q3YEC7 729 aaPredicted RBP10.77□□□□□ -0.69
NFKB1-209ENST00000510638 LMBR1LQ6UX01 489 aa10.77□□□□□ -0.69
NFKB1-209ENST00000510638 SYNE4Q8N205 404 aa10.77□□□□□ -0.69
NFKB1-209ENST00000510638 PCDHB15Q9Y5E8 787 aa10.77□□□□□ -0.69
NFKB1-209ENST00000510638 KDM2BQ8NHM5 1336 aa10.77□□□□□ -0.69
NFKB1-209ENST00000510638 BCORQ6W2J9 1755 aa10.77□□□□□ -0.69
NFKB1-209ENST00000510638 CCDC88AQ3V6T2 1871 aa10.76□□□□□ -0.69
NFKB1-209ENST00000510638 C4AP0C0L4 1744 aa10.76□□□□□ -0.69
NFKB1-209ENST00000510638 PDE6BP35913 854 aa10.76□□□□□ -0.69
NFKB1-209ENST00000510638 FOXO4P98177 505 aa10.76□□□□□ -0.69
NFKB1-209ENST00000510638 IFIT5Q13325 482 aaKnown RBP10.76□□□□□ -0.69
NFKB1-209ENST00000510638 TAF7LQ5H9L4 462 aa10.76□□□□□ -0.69
NFKB1-209ENST00000510638 BRIP1Q9BX63 1249 aa10.76□□□□□ -0.69
NFKB1-209ENST00000510638 PDZRN3Q9UPQ7 1066 aa10.76□□□□□ -0.69
NFKB1-209ENST00000510638 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
NFKB1-209ENST00000510638 CSF1RP07333 972 aa10.75□□□□□ -0.69
NFKB1-209ENST00000510638 HDAC1Q13547 482 aaPredicted RBP10.75□□□□□ -0.69
NFKB1-209ENST00000510638 SF3B3Q15393 1217 aaKnown RBP10.75□□□□□ -0.69
NFKB1-209ENST00000510638 HSP90AB4PQ58FF6 505 aa10.75□□□□□ -0.69
NFKB1-209ENST00000510638 EPHA10Q5JZY3 1008 aa10.75□□□□□ -0.69
NFKB1-209ENST00000510638 CCDC24Q8N4L8 307 aa10.75□□□□□ -0.69
NFKB1-209ENST00000510638 TTLL11Q8NHH1 800 aa10.75□□□□□ -0.69
NFKB1-209ENST00000510638 RPGRQ92834 1020 aaKnown RBP10.75□□□□□ -0.69
NFKB1-209ENST00000510638 KAZALD1Q96I82 304 aa10.75□□□□□ -0.69
NFKB1-209ENST00000510638 CDC5LQ99459 802 aaKnown RBP10.75□□□□□ -0.69
NFKB1-209ENST00000510638 ABCC12Q96J65 1359 aa10.75□□□□□ -0.69
NFKB1-209ENST00000510638 RIC1Q4ADV7 1423 aa10.75□□□□□ -0.69
NFKB1-209ENST00000510638 RGS19P49795 217 aa10.74□□□□□ -0.69
NFKB1-209ENST00000510638 OS9Q13438 667 aaPredicted RBP10.74□□□□□ -0.69
NFKB1-209ENST00000510638 DDX46Q7L014 1031 aaKnown RBP10.74□□□□□ -0.69
NFKB1-209ENST00000510638 SSH3Q8TE77 659 aa10.74□□□□□ -0.69
NFKB1-209ENST00000510638 CCDC85AQ96PX6 553 aaPredicted RBP10.74□□□□□ -0.69
NFKB1-209ENST00000510638 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
NFKB1-209ENST00000510638 PNMA6EA0A0J9YXQ4 647 aa10.73□□□□□ -0.69
NFKB1-209ENST00000510638 ITGA6P23229 1130 aa10.73□□□□□ -0.69
NFKB1-209ENST00000510638 IGHMBP2P38935 993 aaKnown RBP10.73□□□□□ -0.69
NFKB1-209ENST00000510638 POLA2Q14181 598 aa10.73□□□□□ -0.69
NFKB1-209ENST00000510638 CENPQQ7L2Z9 268 aaPredicted RBP10.73□□□□□ -0.69
NFKB1-209ENST00000510638 GCC1Q96CN9 775 aa10.73□□□□□ -0.69
NFKB1-209ENST00000510638 RBM17Q96I25 401 aaKnown RBP10.73□□□□□ -0.69
NFKB1-209ENST00000510638 GREM2Q9H772 168 aa10.73□□□□□ -0.69
NFKB1-209ENST00000510638 RTL9Q8NET4 1388 aa10.73□□□□□ -0.69
NFKB1-209ENST00000510638 ANKRD36CQ5JPF3 1778 aa10.72□□□□□ -0.69
NFKB1-209ENST00000510638 KLRG2A4D1S0 409 aaPredicted RBP10.72□□□□□ -0.69
NFKB1-209ENST00000510638 H0YIN7 160 aa10.72□□□□□ -0.69
NFKB1-209ENST00000510638 SURF6O75683 361 aaKnown RBP10.72□□□□□ -0.69
NFKB1-209ENST00000510638 G3BP1Q13283 466 aaKnown RBP eCLIP10.72□□□□□ -0.69
NFKB1-209ENST00000510638 B4GALNT3Q6L9W6 998 aa10.72□□□□□ -0.69
NFKB1-209ENST00000510638 ERC1Q8IUD2 1116 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms