RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 FKBP4Q02790 459 aaKnown RBP eCLIP7.16□□□□□ -1.26
NEK1-204ENST00000509912 BCL9O00512 1426 aa7.16□□□□□ -1.26
NEK1-204ENST00000509912 C1orf167Q5SNV9 1468 aa7.15□□□□□ -1.26
NEK1-204ENST00000509912 CCDC125Q86Z20 511 aa7.15□□□□□ -1.26
NEK1-204ENST00000509912 ZC3H4Q9UPT8 1303 aaKnown RBP7.15□□□□□ -1.26
NEK1-204ENST00000509912 MSS51Q4VC12 460 aa7.15□□□□□ -1.27
NEK1-204ENST00000509912 ZNF326Q5BKZ1 582 aaKnown RBP7.15□□□□□ -1.27
NEK1-204ENST00000509912 ZNF358Q9NW07 568 aa7.15□□□□□ -1.27
NEK1-204ENST00000509912 DCTN4Q9UJW0 460 aa7.15□□□□□ -1.27
NEK1-204ENST00000509912 USP3Q9Y6I4 520 aa7.15□□□□□ -1.27
NEK1-204ENST00000509912 NRAPQ86VF7 1730 aa7.15□□□□□ -1.27
NEK1-204ENST00000509912 LRP5O75197 1615 aa7.15□□□□□ -1.27
NEK1-204ENST00000509912 TRPM1Q7Z4N2 1603 aa7.15□□□□□ -1.27
NEK1-204ENST00000509912 COL14A1Q05707 1796 aaKnown RBP7.15□□□□□ -1.27
NEK1-204ENST00000509912 A0A1W2PRU2 124 aa7.14□□□□□ -1.27
NEK1-204ENST00000509912 WEE1P30291 646 aa7.14□□□□□ -1.27
NEK1-204ENST00000509912 SH3BP2P78314 561 aa7.14□□□□□ -1.27
NEK1-204ENST00000509912 GPSM3Q9Y4H4 160 aa7.14□□□□□ -1.27
NEK1-204ENST00000509912 ATRNO75882 1429 aa7.14□□□□□ -1.27
NEK1-204ENST00000509912 ERVH48-1M5A8F1 160 aa7.14□□□□□ -1.27
NEK1-204ENST00000509912 ASB16Q96NS5 453 aa7.14□□□□□ -1.27
NEK1-204ENST00000509912 DISP2A7MBM2 1401 aa7.14□□□□□ -1.27
NEK1-204ENST00000509912 PBX2P40425 430 aa7.14□□□□□ -1.27
NEK1-204ENST00000509912 PLCH1Q4KWH8 1693 aa7.13□□□□□ -1.27
NEK1-204ENST00000509912 TULP4Q9NRJ4 1543 aa7.13□□□□□ -1.27
NEK1-204ENST00000509912 TNNI2P48788 182 aa7.13□□□□□ -1.27
NEK1-204ENST00000509912 NAALADL2Q58DX5 795 aa7.13□□□□□ -1.27
NEK1-204ENST00000509912 ZNF772Q68DY9 489 aaPredicted RBP7.13□□□□□ -1.27
NEK1-204ENST00000509912 BPHLQ86WA6 291 aaPredicted RBP7.13□□□□□ -1.27
NEK1-204ENST00000509912 PRR14Q9BWN1 585 aa7.13□□□□□ -1.27
NEK1-204ENST00000509912 SBNO2Q9Y2G9 1366 aa7.13□□□□□ -1.27
NEK1-204ENST00000509912 POTEMA6NI47 508 aa7.13□□□□□ -1.27
NEK1-204ENST00000509912 PLA2G2CQ5R387 149 aa7.13□□□□□ -1.27
NEK1-204ENST00000509912 KCTD15Q96SI1 283 aaPredicted RBP7.13□□□□□ -1.27
NEK1-204ENST00000509912 PARP3Q9Y6F1 533 aa7.13□□□□□ -1.27
NEK1-204ENST00000509912 A6NHS1 94 aa7.12□□□□□ -1.27
NEK1-204ENST00000509912 EAPPQ56P03 285 aaPredicted RBP7.12□□□□□ -1.27
NEK1-204ENST00000509912 LDLRAD1Q5T700 205 aa7.12□□□□□ -1.27
NEK1-204ENST00000509912 ARMC2Q8NEN0 867 aa7.12□□□□□ -1.27
NEK1-204ENST00000509912 DNAJC2Q99543 621 aaKnown RBP7.12□□□□□ -1.27
NEK1-204ENST00000509912 RGS17Q9UGC6 210 aaPredicted RBP7.12□□□□□ -1.27
NEK1-204ENST00000509912 COL24A1Q17RW2 1714 aa7.12□□□□□ -1.27
NEK1-204ENST00000509912 ARHGEF28Q8N1W1 1705 aaKnown RBP7.12□□□□□ -1.27
NEK1-204ENST00000509912 USP4Q13107 963 aa7.12□□□□□ -1.27
NEK1-204ENST00000509912 NBPF20Q3BBV1 942 aa7.12□□□□□ -1.27
NEK1-204ENST00000509912 INTS6LQ5JSJ4 861 aaKnown RBP7.12□□□□□ -1.27
NEK1-204ENST00000509912 NGLY1Q96IV0 654 aa7.12□□□□□ -1.27
NEK1-204ENST00000509912 SLC6A16Q9GZN6 736 aa7.12□□□□□ -1.27
NEK1-204ENST00000509912 C14orf93Q9H972 538 aaKnown RBP7.12□□□□□ -1.27
NEK1-204ENST00000509912 TLL2Q9Y6L7 1015 aa7.12□□□□□ -1.27
NEK1-204ENST00000509912 USP32Q8NFA0 1604 aa7.12□□□□□ -1.27
NEK1-204ENST00000509912 ERCC5P28715 1186 aaPredicted RBP7.11□□□□□ -1.27
NEK1-204ENST00000509912 SCNN1DP51172 638 aa7.11□□□□□ -1.27
NEK1-204ENST00000509912 SLC26A8Q96RN1 970 aa7.11□□□□□ -1.27
NEK1-204ENST00000509912 PNPLA6Q8IY17 1366 aa7.11□□□□□ -1.27
NEK1-204ENST00000509912 THSD7AQ9UPZ6 1657 aa7.11□□□□□ -1.27
NEK1-204ENST00000509912 ADH1BP00325 375 aa7.11□□□□□ -1.27
NEK1-204ENST00000509912 LRFN2Q9ULH4 789 aa7.11□□□□□ -1.27
NEK1-204ENST00000509912 SLIT2O94813 1529 aa7.11□□□□□ -1.27
NEK1-204ENST00000509912 GPR182O15218 404 aa7.11□□□□□ -1.27
NEK1-204ENST00000509912 FSHRP23945 695 aa7.11□□□□□ -1.27
NEK1-204ENST00000509912 EIF1AXP47813 144 aaKnown RBP7.1□□□□□ -1.27
NEK1-204ENST00000509912 HDLBPQ00341 1268 aaKnown RBP7.1□□□□□ -1.27
NEK1-204ENST00000509912 C1orf216Q8TAB5 229 aa7.1□□□□□ -1.27
NEK1-204ENST00000509912 DUSP9Q99956 384 aaKnown RBP7.1□□□□□ -1.27
NEK1-204ENST00000509912 ETNK1Q9HBU6 452 aa7.1□□□□□ -1.27
NEK1-204ENST00000509912 TK2O00142 265 aa7.1□□□□□ -1.27
NEK1-204ENST00000509912 PCDHGB7Q9Y5F8 929 aa7.1□□□□□ -1.27
NEK1-204ENST00000509912 GPRASP1Q5JY77 1395 aa7.09□□□□□ -1.27
NEK1-204ENST00000509912 POTEAQ6S8J7 498 aa7.09□□□□□ -1.27
NEK1-204ENST00000509912 THSD4Q6ZMP0 1018 aa7.09□□□□□ -1.27
NEK1-204ENST00000509912 VASH1Q7L8A9 365 aaPredicted RBP7.09□□□□□ -1.27
NEK1-204ENST00000509912 NT5DC4Q86YG4 428 aa7.09□□□□□ -1.27
NEK1-204ENST00000509912 LRRC59Q96AG4 307 aaKnown RBP7.09□□□□□ -1.27
NEK1-204ENST00000509912 OSBPL3Q9H4L5 887 aa7.09□□□□□ -1.27
NEK1-204ENST00000509912 RGPD1P0DJD0 1748 aa7.09□□□□□ -1.27
NEK1-204ENST00000509912 QSER1Q2KHR3 1735 aa7.09□□□□□ -1.27
NEK1-204ENST00000509912 YTHDC2Q9H6S0 1430 aaKnown RBP7.09□□□□□ -1.27
NEK1-204ENST00000509912 ARHGEF10O15013 1369 aa7.09□□□□□ -1.27
NEK1-204ENST00000509912 HELQQ8TDG4 1101 aa7.09□□□□□ -1.27
NEK1-204ENST00000509912 GPKOWQ92917 476 aaPredicted RBP eCLIP7.09□□□□□ -1.27
NEK1-204ENST00000509912 WNK3Q9BYP7 1800 aa7.09□□□□□ -1.27
NEK1-204ENST00000509912 GDF10P55107 478 aa7.08□□□□□ -1.28
NEK1-204ENST00000509912 SKOR1P84550 965 aa7.08□□□□□ -1.28
NEK1-204ENST00000509912 ZNF784Q8NCA9 323 aaPredicted RBP7.08□□□□□ -1.28
NEK1-204ENST00000509912 PARP2Q9UGN5 583 aa7.08□□□□□ -1.28
NEK1-204ENST00000509912 SLIT3O75094 1523 aa7.08□□□□□ -1.28
NEK1-204ENST00000509912 FAM208AQ9UK61 1670 aaKnown RBP7.08□□□□□ -1.28
NEK1-204ENST00000509912 POLR3AO14802 1390 aaPredicted RBP7.08□□□□□ -1.28
NEK1-204ENST00000509912 ATAD2Q6PL18 1390 aa7.08□□□□□ -1.28
NEK1-204ENST00000509912 ZSCAN29Q8IWY8 852 aaPredicted RBP7.08□□□□□ -1.28
NEK1-204ENST00000509912 TMEM87AQ8NBN3 555 aa7.08□□□□□ -1.28
NEK1-204ENST00000509912 KLRG1Q96E93 195 aa7.08□□□□□ -1.28
NEK1-204ENST00000509912 ARHGEF10LQ9HCE6 1279 aa7.08□□□□□ -1.28
NEK1-204ENST00000509912 LRP6O75581 1613 aa7.08□□□□□ -1.28
NEK1-204ENST00000509912 DHX57Q6P158 1386 aaKnown RBP7.08□□□□□ -1.28
NEK1-204ENST00000509912 PPP1R12BO60237 982 aaPredicted RBP7.08□□□□□ -1.28
NEK1-204ENST00000509912 ERCC3P19447 782 aa7.08□□□□□ -1.28
NEK1-204ENST00000509912 FAM50AQ14320 339 aaKnown RBP7.08□□□□□ -1.28
NEK1-204ENST00000509912 COX20Q5RI15 118 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms