RNA–Protein interactions for RNA: ENST00000509870.1

HOXC-AS3-201, HOXC cluster antisense RNA 3, humanhuman

TSL 4 BASIC

Gene HOXC-AS3, Length 544 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC-AS3-201ENST00000509870 PPIP5K2O43314 1243 aa19.46■□□□□ 0.71
HOXC-AS3-201ENST00000509870 KSR2Q6VAB6 950 aa19.46■□□□□ 0.71
HOXC-AS3-201ENST00000509870 NIM1KQ8IY84 436 aa19.46■□□□□ 0.71
HOXC-AS3-201ENST00000509870 ZNF428Q96B54 188 aa19.46■□□□□ 0.71
HOXC-AS3-201ENST00000509870 RTL5Q5HYW3 569 aaPredicted RBP19.45■□□□□ 0.7
HOXC-AS3-201ENST00000509870 PNMA8AQ86V59 439 aaPredicted RBP19.45■□□□□ 0.7
HOXC-AS3-201ENST00000509870 LDHDQ86WU2 507 aa19.45■□□□□ 0.7
HOXC-AS3-201ENST00000509870 CWC25Q9NXE8 425 aaPredicted RBP19.45■□□□□ 0.7
HOXC-AS3-201ENST00000509870 PCCAP05165 728 aaPredicted RBP19.44■□□□□ 0.7
HOXC-AS3-201ENST00000509870 MAP3K2Q9Y2U5 619 aa19.44■□□□□ 0.7
HOXC-AS3-201ENST00000509870 PI4KAP2A4QPH2 592 aa19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 SLC4A2P04920 1241 aa19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 EPHX2P34913 555 aa19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 NEXNQ0ZGT2 675 aa19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 AOC3Q16853 763 aa19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 SLC51AQ86UW1 340 aa19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 FAM9BQ8IZU0 186 aa19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 PI4KAP1Q8N8J0 262 aa19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 KLRG1Q96E93 195 aa19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 ZNRF3Q9ULT6 936 aa19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 SALL2Q9Y467 1007 aaPredicted RBP19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 GJA3Q9Y6H8 435 aa19.43■□□□□ 0.7
HOXC-AS3-201ENST00000509870 SCN4AP35499 1836 aa19.42■□□□□ 0.7
HOXC-AS3-201ENST00000509870 RPS8P62241 208 aaKnown RBP19.42■□□□□ 0.7
HOXC-AS3-201ENST00000509870 HTRA3P83110 453 aa19.42■□□□□ 0.7
HOXC-AS3-201ENST00000509870 KIAA2012Q0VF49 1180 aa19.42■□□□□ 0.7
HOXC-AS3-201ENST00000509870 FANCIQ9NVI1 1328 aa19.42■□□□□ 0.7
HOXC-AS3-201ENST00000509870 PDE8AO60658 829 aa19.41■□□□□ 0.7
HOXC-AS3-201ENST00000509870 POTEIP0CG38 1075 aa19.41■□□□□ 0.7
HOXC-AS3-201ENST00000509870 POTEJP0CG39 1038 aa19.41■□□□□ 0.7
HOXC-AS3-201ENST00000509870 LMOD1P29536 600 aaPredicted RBP19.41■□□□□ 0.7
HOXC-AS3-201ENST00000509870 EAPPQ56P03 285 aaPredicted RBP19.41■□□□□ 0.7
HOXC-AS3-201ENST00000509870 CELF1Q92879 486 aaKnown RBP19.41■□□□□ 0.7
HOXC-AS3-201ENST00000509870 CCDC152Q4G0S7 254 aa19.4■□□□□ 0.7
HOXC-AS3-201ENST00000509870 MYH16Q9H6N6 1097 aa19.4■□□□□ 0.7
HOXC-AS3-201ENST00000509870 LAMB2P55268 1798 aa19.39■□□□□ 0.7
HOXC-AS3-201ENST00000509870 VAMP4O75379 141 aa19.39■□□□□ 0.69
HOXC-AS3-201ENST00000509870 NSFL1CQ9UNZ2 370 aaKnown RBP19.39■□□□□ 0.69
HOXC-AS3-201ENST00000509870 CLEC11AQ9Y240 323 aa19.39■□□□□ 0.69
HOXC-AS3-201ENST00000509870 COL4A5P29400 1685 aa19.39■□□□□ 0.69
HOXC-AS3-201ENST00000509870 IGKV5-2P06315 115 aa19.38■□□□□ 0.69
HOXC-AS3-201ENST00000509870 CXCL9Q07325 125 aa19.38■□□□□ 0.69
HOXC-AS3-201ENST00000509870 JMYQ8N9B5 988 aa19.38■□□□□ 0.69
HOXC-AS3-201ENST00000509870 CDHR2Q9BYE9 1310 aa19.38■□□□□ 0.69
HOXC-AS3-201ENST00000509870 DDX60Q8IY21 1712 aaKnown RBP19.37■□□□□ 0.69
HOXC-AS3-201ENST00000509870 SCNN1DP51172 638 aa19.37■□□□□ 0.69
HOXC-AS3-201ENST00000509870 EXOSC9Q06265 439 aaKnown RBP19.37■□□□□ 0.69
HOXC-AS3-201ENST00000509870 FLIIQ13045 1269 aa19.37■□□□□ 0.69
HOXC-AS3-201ENST00000509870 TNIP1Q15025 636 aa19.37■□□□□ 0.69
HOXC-AS3-201ENST00000509870 WASHC4Q2M389 1173 aa19.37■□□□□ 0.69
HOXC-AS3-201ENST00000509870 G2E3Q7L622 706 aa19.37■□□□□ 0.69
HOXC-AS3-201ENST00000509870 CREBZFQ9NS37 354 aa19.37■□□□□ 0.69
HOXC-AS3-201ENST00000509870 ITGBL1O95965 494 aaPredicted RBP19.36■□□□□ 0.69
HOXC-AS3-201ENST00000509870 CIAPIN1Q6FI81 312 aa19.36■□□□□ 0.69
HOXC-AS3-201ENST00000509870 EYA3Q99504 573 aa19.36■□□□□ 0.69
HOXC-AS3-201ENST00000509870 PASKQ96RG2 1323 aa19.35■□□□□ 0.69
HOXC-AS3-201ENST00000509870 NEURL1BA8MQ27 555 aa19.35■□□□□ 0.69
HOXC-AS3-201ENST00000509870 C6orf229H3BNL8 230 aa19.35■□□□□ 0.69
HOXC-AS3-201ENST00000509870 EPS15P42566 896 aa19.35■□□□□ 0.69
HOXC-AS3-201ENST00000509870 GPSM2P81274 684 aa19.35■□□□□ 0.69
HOXC-AS3-201ENST00000509870 FKBP5Q13451 457 aaPredicted RBP19.35■□□□□ 0.69
HOXC-AS3-201ENST00000509870 USP50Q70EL3 339 aaPredicted RBP19.35■□□□□ 0.69
HOXC-AS3-201ENST00000509870 JARID2Q92833 1246 aaPredicted RBP19.35■□□□□ 0.69
HOXC-AS3-201ENST00000509870 SEC31BQ9NQW1 1179 aa19.35■□□□□ 0.69
HOXC-AS3-201ENST00000509870 CWF19L2Q2TBE0 894 aaKnown RBP19.34■□□□□ 0.69
HOXC-AS3-201ENST00000509870 CNTROBQ8N137 903 aa19.34■□□□□ 0.69
HOXC-AS3-201ENST00000509870 PODXL2Q9NZ53 605 aa19.34■□□□□ 0.69
HOXC-AS3-201ENST00000509870 GPRC5DQ9NZD1 345 aa19.34■□□□□ 0.69
HOXC-AS3-201ENST00000509870 POLLQ9UGP5 575 aa19.34■□□□□ 0.69
HOXC-AS3-201ENST00000509870 H7C1W4 665 aa19.33■□□□□ 0.68
HOXC-AS3-201ENST00000509870 CTSWP56202 376 aa19.33■□□□□ 0.68
HOXC-AS3-201ENST00000509870 ANKRD18AQ8IVF6 992 aa19.33■□□□□ 0.68
HOXC-AS3-201ENST00000509870 LINS1Q8NG48 757 aa19.33■□□□□ 0.68
HOXC-AS3-201ENST00000509870 TBC1D16Q8TBP0 767 aa19.33■□□□□ 0.68
HOXC-AS3-201ENST00000509870 DNAAF4Q8WXU2 420 aa19.33■□□□□ 0.68
HOXC-AS3-201ENST00000509870 CDC5LQ99459 802 aaKnown RBP19.33■□□□□ 0.68
HOXC-AS3-201ENST00000509870 SPINK5Q9NQ38 1064 aaPredicted RBP19.33■□□□□ 0.68
HOXC-AS3-201ENST00000509870 ADARB2Q9NS39 739 aaKnown RBP19.33■□□□□ 0.68
HOXC-AS3-201ENST00000509870 RAD17O75943 681 aa19.32■□□□□ 0.68
HOXC-AS3-201ENST00000509870 GCKRQ14397 625 aa19.32■□□□□ 0.68
HOXC-AS3-201ENST00000509870 MAP1SQ66K74 1059 aaPredicted RBP19.32■□□□□ 0.68
HOXC-AS3-201ENST00000509870 TTLL11Q8NHH1 800 aa19.32■□□□□ 0.68
HOXC-AS3-201ENST00000509870 ZC3H12CQ9C0D7 883 aaKnown RBP19.32■□□□□ 0.68
HOXC-AS3-201ENST00000509870 ANKIB1Q9P2G1 1089 aa19.32■□□□□ 0.68
HOXC-AS3-201ENST00000509870 TAF1P21675 1872 aa19.32■□□□□ 0.68
HOXC-AS3-201ENST00000509870 LRRC37AA6NMS7 1700 aa19.31■□□□□ 0.68
HOXC-AS3-201ENST00000509870 TMEM88BA6NKF7 163 aa19.31■□□□□ 0.68
HOXC-AS3-201ENST00000509870 GMPSP49915 693 aaPredicted RBP19.31■□□□□ 0.68
HOXC-AS3-201ENST00000509870 UBE3BQ7Z3V4 1068 aa19.31■□□□□ 0.68
HOXC-AS3-201ENST00000509870 CCDC85AQ96PX6 553 aaPredicted RBP19.31■□□□□ 0.68
HOXC-AS3-201ENST00000509870 BCL2L13Q9BXK5 485 aa19.31■□□□□ 0.68
HOXC-AS3-201ENST00000509870 YDJCA8MPS7 323 aa19.3■□□□□ 0.68
HOXC-AS3-201ENST00000509870 RIMBP2O15034 1052 aa19.3■□□□□ 0.68
HOXC-AS3-201ENST00000509870 GGA1Q9UJY5 639 aa19.3■□□□□ 0.68
HOXC-AS3-201ENST00000509870 RTL9Q8NET4 1388 aa19.3■□□□□ 0.68
HOXC-AS3-201ENST00000509870 ZNF521Q96K83 1311 aa19.29■□□□□ 0.68
HOXC-AS3-201ENST00000509870 DUOX1Q9NRD9 1551 aa19.29■□□□□ 0.68
HOXC-AS3-201ENST00000509870 DPF2Q92785 391 aa19.29■□□□□ 0.68
HOXC-AS3-201ENST00000509870 PLA2G12BQ9BX93 195 aa19.29■□□□□ 0.68
HOXC-AS3-201ENST00000509870 ADAMTSL1Q8N6G6 1762 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms