RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ZNF280CQ8ND82 737 aa7.75□□□□□ -1.17
NIPBL-206ENST00000509429 MYRFLQ96LU7 910 aa7.75□□□□□ -1.17
NIPBL-206ENST00000509429 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.75□□□□□ -1.17
NIPBL-206ENST00000509429 SERTM1A2A2V5 107 aa7.74□□□□□ -1.17
NIPBL-206ENST00000509429 GPR37L1O60883 481 aa7.74□□□□□ -1.17
NIPBL-206ENST00000509429 FAM46AQ96IP4 442 aaKnown RBP7.74□□□□□ -1.17
NIPBL-206ENST00000509429 SUSD3Q96L08 255 aa7.74□□□□□ -1.17
NIPBL-206ENST00000509429 CCINQ13939 588 aa7.73□□□□□ -1.17
NIPBL-206ENST00000509429 SMG9Q9H0W8 520 aaKnown RBP7.73□□□□□ -1.17
NIPBL-206ENST00000509429 ZBTB42B2RXF5 422 aa7.72□□□□□ -1.17
NIPBL-206ENST00000509429 SETDB1Q15047 1291 aa7.72□□□□□ -1.17
NIPBL-206ENST00000509429 SH3PXD2AQ5TCZ1 1133 aa7.72□□□□□ -1.17
NIPBL-206ENST00000509429 AGBL5Q8NDL9 886 aa7.72□□□□□ -1.17
NIPBL-206ENST00000509429 TRPM4Q8TD43 1214 aa7.72□□□□□ -1.17
NIPBL-206ENST00000509429 MAP3K6O95382 1288 aa7.71□□□□□ -1.18
NIPBL-206ENST00000509429 PLCB2Q00722 1185 aa7.71□□□□□ -1.18
NIPBL-206ENST00000509429 FAM20CQ8IXL6 584 aa7.71□□□□□ -1.18
NIPBL-206ENST00000509429 SLC38A3Q99624 504 aa7.71□□□□□ -1.18
NIPBL-206ENST00000509429 LEMD3Q9Y2U8 911 aa7.71□□□□□ -1.18
NIPBL-206ENST00000509429 CARMIL2Q6F5E8 1435 aa7.7□□□□□ -1.18
NIPBL-206ENST00000509429 FOSL1P15407 271 aa7.7□□□□□ -1.18
NIPBL-206ENST00000509429 BTLAQ7Z6A9 289 aa7.7□□□□□ -1.18
NIPBL-206ENST00000509429 SLC9A9Q8IVB4 645 aa7.7□□□□□ -1.18
NIPBL-206ENST00000509429 BIN1O00499 593 aa7.69□□□□□ -1.18
NIPBL-206ENST00000509429 GRNP28799 593 aaKnown RBP7.69□□□□□ -1.18
NIPBL-206ENST00000509429 MAP7D1Q3KQU3 841 aa7.69□□□□□ -1.18
NIPBL-206ENST00000509429 GIMAP7Q8NHV1 300 aa7.69□□□□□ -1.18
NIPBL-206ENST00000509429 TBCELQ5QJ74 424 aa7.68□□□□□ -1.18
NIPBL-206ENST00000509429 BEND4Q6ZU67 534 aa7.68□□□□□ -1.18
NIPBL-206ENST00000509429 RAPGEFL1Q9UHV5 662 aa7.68□□□□□ -1.18
NIPBL-206ENST00000509429 EPHA4P54764 986 aa7.67□□□□□ -1.18
NIPBL-206ENST00000509429 MLLT1Q03111 559 aaPredicted RBP7.67□□□□□ -1.18
NIPBL-206ENST00000509429 TMEM132AQ24JP5 1023 aa7.67□□□□□ -1.18
NIPBL-206ENST00000509429 DHX32Q7L7V1 743 aaKnown RBP7.67□□□□□ -1.18
NIPBL-206ENST00000509429 CILP2Q8IUL8 1156 aa7.67□□□□□ -1.18
NIPBL-206ENST00000509429 IL22RA1Q8N6P7 574 aa7.67□□□□□ -1.18
NIPBL-206ENST00000509429 KCNF1Q9H3M0 494 aa7.67□□□□□ -1.18
NIPBL-206ENST00000509429 ATG3Q9NT62 314 aa7.67□□□□□ -1.18
NIPBL-206ENST00000509429 NDUFB9Q9Y6M9 179 aa7.67□□□□□ -1.18
NIPBL-206ENST00000509429 GPLD1P80108 840 aa7.66□□□□□ -1.18
NIPBL-206ENST00000509429 BHLHE22Q8NFJ8 381 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-206ENST00000509429 DDRGK1Q96HY6 314 aa7.66□□□□□ -1.18
NIPBL-206ENST00000509429 MFSD14AQ96MC6 490 aa7.66□□□□□ -1.18
NIPBL-206ENST00000509429 TOX2Q96NM4 488 aa7.66□□□□□ -1.18
NIPBL-206ENST00000509429 CSRNP1Q96S65 589 aa7.66□□□□□ -1.18
NIPBL-206ENST00000509429 PHACTR1Q9C0D0 580 aa7.66□□□□□ -1.18
NIPBL-206ENST00000509429 PCDHGA11Q9Y5H2 935 aa7.66□□□□□ -1.18
NIPBL-206ENST00000509429 HIRAP54198 1017 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-206ENST00000509429 EIF4G2P78344 907 aaKnown RBP eCLIP7.65□□□□□ -1.18
NIPBL-206ENST00000509429 ACAD11Q709F0 780 aa7.65□□□□□ -1.18
NIPBL-206ENST00000509429 BSDC1Q9NW68 430 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-206ENST00000509429 HCN4Q9Y3Q4 1203 aa7.65□□□□□ -1.18
NIPBL-206ENST00000509429 WISP1O95388 367 aa7.64□□□□□ -1.19
NIPBL-206ENST00000509429 BMP3P12645 472 aa7.64□□□□□ -1.19
NIPBL-206ENST00000509429 CPSF6Q16630 551 aaKnown RBP eCLIP7.64□□□□□ -1.19
NIPBL-206ENST00000509429 TTLL10Q6ZVT0 673 aa7.64□□□□□ -1.19
NIPBL-206ENST00000509429 SIAH1Q8IUQ4 282 aa7.64□□□□□ -1.19
NIPBL-206ENST00000509429 FLCNQ8NFG4 579 aa7.64□□□□□ -1.19
NIPBL-206ENST00000509429 PAK6Q9NQU5 681 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-206ENST00000509429 ZNF358Q9NW07 568 aa7.64□□□□□ -1.19
NIPBL-206ENST00000509429 CFPP27918 469 aa7.63□□□□□ -1.19
NIPBL-206ENST00000509429 RANGAP1P46060 587 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-206ENST00000509429 GDF6Q6KF10 455 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-206ENST00000509429 LCNL1Q6ZST4 164 aa7.63□□□□□ -1.19
NIPBL-206ENST00000509429 EIF2AK2P19525 551 aaKnown RBP7.62□□□□□ -1.19
NIPBL-206ENST00000509429 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-206ENST00000509429 PLPP7Q8NBV4 271 aa7.62□□□□□ -1.19
NIPBL-206ENST00000509429 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
NIPBL-206ENST00000509429 ZSCAN18Q8TBC5 510 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-206ENST00000509429 ZFATQ9P243 1243 aa7.62□□□□□ -1.19
NIPBL-206ENST00000509429 HIF1AQ16665 826 aa7.61□□□□□ -1.19
NIPBL-206ENST00000509429 HFE2Q6ZVN8 426 aa7.61□□□□□ -1.19
NIPBL-206ENST00000509429 OSBPL1AQ9BXW6 950 aa7.61□□□□□ -1.19
NIPBL-206ENST00000509429 MUC3BQ9H195 1237 aa7.61□□□□□ -1.19
NIPBL-206ENST00000509429 PSMA6P60900 246 aaKnown RBP7.6□□□□□ -1.19
NIPBL-206ENST00000509429 POTEAQ6S8J7 498 aa7.6□□□□□ -1.19
NIPBL-206ENST00000509429 C1QL4Q86Z23 238 aa7.6□□□□□ -1.19
NIPBL-206ENST00000509429 TNS4Q8IZW8 715 aa7.6□□□□□ -1.19
NIPBL-206ENST00000509429 GALNT11Q8NCW6 608 aa7.6□□□□□ -1.19
NIPBL-206ENST00000509429 TMEM40Q8WWA1 233 aa7.6□□□□□ -1.19
NIPBL-206ENST00000509429 PLD4Q96BZ4 506 aa7.6□□□□□ -1.19
NIPBL-206ENST00000509429 FAM84AQ96KN4 292 aa7.6□□□□□ -1.19
NIPBL-206ENST00000509429 FAM117AQ9C073 453 aa7.6□□□□□ -1.19
NIPBL-206ENST00000509429 CHMP3Q9Y3E7 222 aa7.6□□□□□ -1.19
NIPBL-206ENST00000509429 SART1O43290 800 aaKnown RBP7.59□□□□□ -1.19
NIPBL-206ENST00000509429 F13BP05160 661 aa7.59□□□□□ -1.19
NIPBL-206ENST00000509429 ARID4AP29374 1257 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-206ENST00000509429 CD68P34810 354 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-206ENST00000509429 KIAA1211Q6ZU35 1233 aa7.59□□□□□ -1.19
NIPBL-206ENST00000509429 LMCD1Q9NZU5 365 aa7.59□□□□□ -1.19
NIPBL-206ENST00000509429 HIF3AQ9Y2N7 669 aa7.59□□□□□ -1.19
NIPBL-206ENST00000509429 NRLP54845 237 aa7.58□□□□□ -1.2
NIPBL-206ENST00000509429 MESP2Q0VG99 397 aa7.58□□□□□ -1.2
NIPBL-206ENST00000509429 SLC24A3Q9HC58 644 aa7.58□□□□□ -1.2
NIPBL-206ENST00000509429 TIMELESSQ9UNS1 1208 aa7.58□□□□□ -1.2
NIPBL-206ENST00000509429 CACTIN-AS1Q8N1I8 211 aa7.57□□□□□ -1.2
NIPBL-206ENST00000509429 FBXL6Q8N531 539 aa7.57□□□□□ -1.2
NIPBL-206ENST00000509429 FAM168AQ92567 244 aa7.57□□□□□ -1.2
NIPBL-206ENST00000509429 PPME1Q9Y570 386 aa7.57□□□□□ -1.2
NIPBL-206ENST00000509429 TARSP26639 723 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms