RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 DUSP27Q5VZP5 1158 aa18.9■□□□□ 0.62
HMGCL-208ENST00000509389 ANKRD13DQ6ZTN6 518 aa18.9■□□□□ 0.62
HMGCL-208ENST00000509389 DDX46Q7L014 1031 aaKnown RBP18.9■□□□□ 0.62
HMGCL-208ENST00000509389 RTFDC1Q9BY42 306 aaPredicted RBP18.9■□□□□ 0.62
HMGCL-208ENST00000509389 MBIPQ9NS73 344 aa18.9■□□□□ 0.62
HMGCL-208ENST00000509389 DDX60Q8IY21 1712 aaKnown RBP18.89■□□□□ 0.61
HMGCL-208ENST00000509389 EPS15P42566 896 aa18.89■□□□□ 0.61
HMGCL-208ENST00000509389 SUPT20HQ8NEM7 779 aa18.89■□□□□ 0.61
HMGCL-208ENST00000509389 ISCA1Q9BUE6 129 aa18.89■□□□□ 0.61
HMGCL-208ENST00000509389 APAF1O14727 1248 aa18.88■□□□□ 0.61
HMGCL-208ENST00000509389 ZNF853P0CG23 659 aa18.88■□□□□ 0.61
HMGCL-208ENST00000509389 GRAPQ13588 217 aa18.88■□□□□ 0.61
HMGCL-208ENST00000509389 DPP8Q6V1X1 898 aaPredicted RBP18.88■□□□□ 0.61
HMGCL-208ENST00000509389 MPNDQ8N594 471 aa18.88■□□□□ 0.61
HMGCL-208ENST00000509389 GRAPLQ8TC17 118 aaPredicted RBP18.88■□□□□ 0.61
HMGCL-208ENST00000509389 HYPKQ9NX55 129 aa18.88■□□□□ 0.61
HMGCL-208ENST00000509389 ATP5J2-PTCD1G3V325 749 aa18.87■□□□□ 0.61
HMGCL-208ENST00000509389 TNS4Q8IZW8 715 aa18.86■□□□□ 0.61
HMGCL-208ENST00000509389 FAM89AQ96GI7 184 aa18.86■□□□□ 0.61
HMGCL-208ENST00000509389 ZNRF3Q9ULT6 936 aa18.86■□□□□ 0.61
HMGCL-208ENST00000509389 VEGFBP49765 207 aa18.85■□□□□ 0.61
HMGCL-208ENST00000509389 CXCL9Q07325 125 aa18.85■□□□□ 0.61
HMGCL-208ENST00000509389 NCBP3Q53F19 620 aaKnown RBP18.85■□□□□ 0.61
HMGCL-208ENST00000509389 IFT57Q9NWB7 429 aa18.85■□□□□ 0.61
HMGCL-208ENST00000509389 KIAA2012Q0VF49 1180 aa18.84■□□□□ 0.61
HMGCL-208ENST00000509389 USP50Q70EL3 339 aaPredicted RBP18.84■□□□□ 0.61
HMGCL-208ENST00000509389 GPRC5DQ9NZD1 345 aa18.84■□□□□ 0.61
HMGCL-208ENST00000509389 LRRC37AA6NMS7 1700 aa18.84■□□□□ 0.61
HMGCL-208ENST00000509389 DUOX1Q9NRD9 1551 aa18.83■□□□□ 0.61
HMGCL-208ENST00000509389 GNAI1P63096 354 aa18.83■□□□□ 0.61
HMGCL-208ENST00000509389 TRIM28Q13263 835 aaKnown RBP18.83■□□□□ 0.61
HMGCL-208ENST00000509389 SF3B3Q15393 1217 aaKnown RBP18.83■□□□□ 0.61
HMGCL-208ENST00000509389 TMC4Q7Z404 712 aa18.83■□□□□ 0.61
HMGCL-208ENST00000509389 ZNF521Q96K83 1311 aa18.83■□□□□ 0.6
HMGCL-208ENST00000509389 RASSF10A6NK89 507 aa18.82■□□□□ 0.6
HMGCL-208ENST00000509389 ELL2O00472 640 aaPredicted RBP18.82■□□□□ 0.6
HMGCL-208ENST00000509389 CALD1Q05682 793 aaKnown RBP18.82■□□□□ 0.6
HMGCL-208ENST00000509389 FMR1Q06787 632 aaKnown RBP eCLIP18.82■□□□□ 0.6
HMGCL-208ENST00000509389 RTL5Q5HYW3 569 aaPredicted RBP18.82■□□□□ 0.6
HMGCL-208ENST00000509389 CELF1Q92879 486 aaKnown RBP18.82■□□□□ 0.6
HMGCL-208ENST00000509389 PHAXQ9H814 394 aaKnown RBP18.82■□□□□ 0.6
HMGCL-208ENST00000509389 GMPSP49915 693 aaPredicted RBP18.81■□□□□ 0.6
HMGCL-208ENST00000509389 DEFB115Q30KQ5 88 aa18.81■□□□□ 0.6
HMGCL-208ENST00000509389 CIAPIN1Q6FI81 312 aa18.81■□□□□ 0.6
HMGCL-208ENST00000509389 RIC3Q7Z5B4 369 aa18.81■□□□□ 0.6
HMGCL-208ENST00000509389 ADARB2Q9NS39 739 aaKnown RBP18.81■□□□□ 0.6
HMGCL-208ENST00000509389 COL4A1P02462 1669 aa18.81■□□□□ 0.6
HMGCL-208ENST00000509389 TRPM7Q96QT4 1865 aa18.81■□□□□ 0.6
HMGCL-208ENST00000509389 IRS4O14654 1257 aaPredicted RBP18.81■□□□□ 0.6
HMGCL-208ENST00000509389 FOXN1O15353 648 aa18.81■□□□□ 0.6
HMGCL-208ENST00000509389 RAD17O75943 681 aa18.81■□□□□ 0.6
HMGCL-208ENST00000509389 GOLGA2Q08379 1002 aa18.81■□□□□ 0.6
HMGCL-208ENST00000509389 C8orf58Q8NAV2 365 aa18.81■□□□□ 0.6
HMGCL-208ENST00000509389 TNIP1Q15025 636 aa18.8■□□□□ 0.6
HMGCL-208ENST00000509389 ABT1Q9ULW3 272 aaKnown RBP18.8■□□□□ 0.6
HMGCL-208ENST00000509389 YDJCA8MPS7 323 aa18.79■□□□□ 0.6
HMGCL-208ENST00000509389 TRAF5O00463 557 aa18.79■□□□□ 0.6
HMGCL-208ENST00000509389 NSFL1CQ9UNZ2 370 aaKnown RBP18.79■□□□□ 0.6
HMGCL-208ENST00000509389 CAPN15O75808 1086 aa18.78■□□□□ 0.6
HMGCL-208ENST00000509389 ZBTB38Q8NAP3 1195 aaPredicted RBP18.78■□□□□ 0.6
HMGCL-208ENST00000509389 MYD88Q99836 296 aa18.78■□□□□ 0.6
HMGCL-208ENST00000509389 BCL2L13Q9BXK5 485 aa18.78■□□□□ 0.6
HMGCL-208ENST00000509389 CDHR2Q9BYE9 1310 aa18.77■□□□□ 0.6
HMGCL-208ENST00000509389 GPSM2P81274 684 aa18.77■□□□□ 0.6
HMGCL-208ENST00000509389 WASHC4Q2M389 1173 aa18.77■□□□□ 0.6
HMGCL-208ENST00000509389 CST9Q5W186 159 aa18.77■□□□□ 0.6
HMGCL-208ENST00000509389 AIDAQ96BJ3 306 aa18.77■□□□□ 0.6
HMGCL-208ENST00000509389 WBP1LQ9NX94 342 aa18.77■□□□□ 0.6
HMGCL-208ENST00000509389 WDR33Q9C0J8 1336 aaKnown RBP18.76■□□□□ 0.59
HMGCL-208ENST00000509389 RPS8P62241 208 aaKnown RBP18.76■□□□□ 0.59
HMGCL-208ENST00000509389 POLLQ9UGP5 575 aa18.76■□□□□ 0.59
HMGCL-208ENST00000509389 PGAP2Q9UHJ9 254 aa18.76■□□□□ 0.59
HMGCL-208ENST00000509389 C6orf229H3BNL8 230 aa18.75■□□□□ 0.59
HMGCL-208ENST00000509389 RIMBP2O15034 1052 aa18.75■□□□□ 0.59
HMGCL-208ENST00000509389 CTCFP49711 727 aaPredicted RBP18.75■□□□□ 0.59
HMGCL-208ENST00000509389 HIRAP54198 1017 aaPredicted RBP18.75■□□□□ 0.59
HMGCL-208ENST00000509389 CCDC30Q5VVM6 783 aa18.75■□□□□ 0.59
HMGCL-208ENST00000509389 TSPYL6Q8N831 410 aa18.75■□□□□ 0.59
HMGCL-208ENST00000509389 CCDC191Q8NCU4 936 aa18.75■□□□□ 0.59
HMGCL-208ENST00000509389 DBNDD1Q9H9R9 158 aa18.75■□□□□ 0.59
HMGCL-208ENST00000509389 SEC31BQ9NQW1 1179 aa18.75■□□□□ 0.59
HMGCL-208ENST00000509389 CNOT7Q9UIV1 285 aaKnown RBP18.75■□□□□ 0.59
HMGCL-208ENST00000509389 SHTN1A0MZ66 631 aa18.74■□□□□ 0.59
HMGCL-208ENST00000509389 PCCAP05165 728 aaPredicted RBP18.74■□□□□ 0.59
HMGCL-208ENST00000509389 CCDC27Q2M243 656 aa18.74■□□□□ 0.59
HMGCL-208ENST00000509389 TRPM4Q8TD43 1214 aa18.74■□□□□ 0.59
HMGCL-208ENST00000509389 METTL22Q9BUU2 404 aaPredicted RBP18.74■□□□□ 0.59
HMGCL-208ENST00000509389 CHMP4AQ9BY43 222 aa18.74■□□□□ 0.59
HMGCL-208ENST00000509389 PRDM10Q9NQV6 1147 aa18.74■□□□□ 0.59
HMGCL-208ENST00000509389 DDX58O95786 925 aaKnown RBP18.73■□□□□ 0.59
HMGCL-208ENST00000509389 HSP90B1P14625 803 aaKnown RBP18.73■□□□□ 0.59
HMGCL-208ENST00000509389 TBC1D16Q8TBP0 767 aa18.73■□□□□ 0.59
HMGCL-208ENST00000509389 ZC3H15Q8WU90 426 aaKnown RBP18.73■□□□□ 0.59
HMGCL-208ENST00000509389 JARID2Q92833 1246 aaPredicted RBP18.73■□□□□ 0.59
HMGCL-208ENST00000509389 EYA3Q99504 573 aa18.73■□□□□ 0.59
HMGCL-208ENST00000509389 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
HMGCL-208ENST00000509389 CWC25Q9NXE8 425 aaPredicted RBP18.73■□□□□ 0.59
HMGCL-208ENST00000509389 ZBTB12Q9Y330 459 aaPredicted RBP18.73■□□□□ 0.59
HMGCL-208ENST00000509389 TLL2Q9Y6L7 1015 aa18.73■□□□□ 0.59
HMGCL-208ENST00000509389 H7C1D1 291 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms