RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 USP50Q70EL3 339 aaPredicted RBP20.01■□□□□ 0.79
SMAD5-205ENST00000509297 MPNDQ8N594 471 aa20.01■□□□□ 0.79
SMAD5-205ENST00000509297 LTBP1Q14766 1721 aa20■□□□□ 0.79
SMAD5-205ENST00000509297 APAF1O14727 1248 aa20■□□□□ 0.79
SMAD5-205ENST00000509297 KIAA2012Q0VF49 1180 aa20■□□□□ 0.79
SMAD5-205ENST00000509297 SF3B3Q15393 1217 aaKnown RBP20■□□□□ 0.79
SMAD5-205ENST00000509297 AOC3Q16853 763 aa20■□□□□ 0.79
SMAD5-205ENST00000509297 MAP1SQ66K74 1059 aaPredicted RBP20■□□□□ 0.79
SMAD5-205ENST00000509297 CHMP4AQ9BY43 222 aa19.99■□□□□ 0.79
SMAD5-205ENST00000509297 CDHR2Q9BYE9 1310 aa19.99■□□□□ 0.79
SMAD5-205ENST00000509297 EPS15P42566 896 aa19.98■□□□□ 0.79
SMAD5-205ENST00000509297 CXCL9Q07325 125 aa19.98■□□□□ 0.79
SMAD5-205ENST00000509297 GPRC5DQ9NZD1 345 aa19.98■□□□□ 0.79
SMAD5-205ENST00000509297 LRRC37AA6NMS7 1700 aa19.97■□□□□ 0.79
SMAD5-205ENST00000509297 DDX60Q8IY21 1712 aaKnown RBP19.97■□□□□ 0.79
SMAD5-205ENST00000509297 RASSF10A6NK89 507 aa19.97■□□□□ 0.79
SMAD5-205ENST00000509297 FAM89AQ96GI7 184 aa19.97■□□□□ 0.79
SMAD5-205ENST00000509297 ADARB2Q9NS39 739 aaKnown RBP19.97■□□□□ 0.79
SMAD5-205ENST00000509297 ATP5J2-PTCD1G3V325 749 aa19.96■□□□□ 0.79
SMAD5-205ENST00000509297 GOLGA2Q08379 1002 aa19.96■□□□□ 0.79
SMAD5-205ENST00000509297 HSP90B1P14625 803 aaKnown RBP19.95■□□□□ 0.78
SMAD5-205ENST00000509297 VEGFBP49765 207 aa19.95■□□□□ 0.78
SMAD5-205ENST00000509297 TNIP1Q15025 636 aa19.95■□□□□ 0.78
SMAD5-205ENST00000509297 DUOX1Q9NRD9 1551 aa19.95■□□□□ 0.78
SMAD5-205ENST00000509297 CIAPIN1Q6FI81 312 aa19.94■□□□□ 0.78
SMAD5-205ENST00000509297 RIC3Q7Z5B4 369 aa19.94■□□□□ 0.78
SMAD5-205ENST00000509297 TNS4Q8IZW8 715 aa19.94■□□□□ 0.78
SMAD5-205ENST00000509297 IRS4O14654 1257 aaPredicted RBP19.93■□□□□ 0.78
SMAD5-205ENST00000509297 GMPSP49915 693 aaPredicted RBP19.93■□□□□ 0.78
SMAD5-205ENST00000509297 DEFB115Q30KQ5 88 aa19.93■□□□□ 0.78
SMAD5-205ENST00000509297 ZBTB38Q8NAP3 1195 aaPredicted RBP19.93■□□□□ 0.78
SMAD5-205ENST00000509297 CELF1Q92879 486 aaKnown RBP19.93■□□□□ 0.78
SMAD5-205ENST00000509297 PGAP2Q9UHJ9 254 aa19.93■□□□□ 0.78
SMAD5-205ENST00000509297 C8orf58Q8NAV2 365 aa19.92■□□□□ 0.78
SMAD5-205ENST00000509297 CCDC191Q8NCU4 936 aa19.92■□□□□ 0.78
SMAD5-205ENST00000509297 PHAXQ9H814 394 aaKnown RBP19.92■□□□□ 0.78
SMAD5-205ENST00000509297 CCDC27Q2M243 656 aa19.91■□□□□ 0.78
SMAD5-205ENST00000509297 CCDC30Q5VVM6 783 aa19.91■□□□□ 0.78
SMAD5-205ENST00000509297 ZC3H15Q8WU90 426 aaKnown RBP19.91■□□□□ 0.78
SMAD5-205ENST00000509297 YDJCA8MPS7 323 aa19.9■□□□□ 0.78
SMAD5-205ENST00000509297 ELL2O00472 640 aaPredicted RBP19.9■□□□□ 0.78
SMAD5-205ENST00000509297 RAD17O75943 681 aa19.9■□□□□ 0.78
SMAD5-205ENST00000509297 DDX58O95786 925 aaKnown RBP19.9■□□□□ 0.78
SMAD5-205ENST00000509297 RPS8P62241 208 aaKnown RBP19.9■□□□□ 0.78
SMAD5-205ENST00000509297 WASHC4Q2M389 1173 aa19.9■□□□□ 0.78
SMAD5-205ENST00000509297 NCBP3Q53F19 620 aaKnown RBP19.9■□□□□ 0.78
SMAD5-205ENST00000509297 WBP1LQ9NX94 342 aa19.9■□□□□ 0.78
SMAD5-205ENST00000509297 NSFL1CQ9UNZ2 370 aaKnown RBP19.9■□□□□ 0.78
SMAD5-205ENST00000509297 TAF1P21675 1872 aa19.9■□□□□ 0.78
SMAD5-205ENST00000509297 PCCAP05165 728 aaPredicted RBP19.89■□□□□ 0.77
SMAD5-205ENST00000509297 DPF2Q92785 391 aa19.89■□□□□ 0.77
SMAD5-205ENST00000509297 ZNF428Q96B54 188 aa19.89■□□□□ 0.77
SMAD5-205ENST00000509297 BCL2L13Q9BXK5 485 aa19.89■□□□□ 0.77
SMAD5-205ENST00000509297 PRDM10Q9NQV6 1147 aa19.89■□□□□ 0.77
SMAD5-205ENST00000509297 ABT1Q9ULW3 272 aaKnown RBP19.89■□□□□ 0.77
SMAD5-205ENST00000509297 FOXN1O15353 648 aa19.88■□□□□ 0.77
SMAD5-205ENST00000509297 RTL5Q5HYW3 569 aaPredicted RBP19.88■□□□□ 0.77
SMAD5-205ENST00000509297 CST9Q5W186 159 aa19.88■□□□□ 0.77
SMAD5-205ENST00000509297 AIDAQ96BJ3 306 aa19.88■□□□□ 0.77
SMAD5-205ENST00000509297 EYA3Q99504 573 aa19.88■□□□□ 0.77
SMAD5-205ENST00000509297 MYD88Q99836 296 aa19.88■□□□□ 0.77
SMAD5-205ENST00000509297 METTL22Q9BUU2 404 aaPredicted RBP19.88■□□□□ 0.77
SMAD5-205ENST00000509297 CWC25Q9NXE8 425 aaPredicted RBP19.88■□□□□ 0.77
SMAD5-205ENST00000509297 PODXL2Q9NZ53 605 aa19.88■□□□□ 0.77
SMAD5-205ENST00000509297 POLLQ9UGP5 575 aa19.88■□□□□ 0.77
SMAD5-205ENST00000509297 WDR33Q9C0J8 1336 aaKnown RBP19.87■□□□□ 0.77
SMAD5-205ENST00000509297 CTCFP49711 727 aaPredicted RBP19.87■□□□□ 0.77
SMAD5-205ENST00000509297 GPSM2P81274 684 aa19.87■□□□□ 0.77
SMAD5-205ENST00000509297 C6orf229H3BNL8 230 aa19.86■□□□□ 0.77
SMAD5-205ENST00000509297 TRAF5O00463 557 aa19.86■□□□□ 0.77
SMAD5-205ENST00000509297 MAP2K1Q02750 393 aaPredicted RBP19.86■□□□□ 0.77
SMAD5-205ENST00000509297 CCDC152Q4G0S7 254 aa19.86■□□□□ 0.77
SMAD5-205ENST00000509297 TBC1D16Q8TBP0 767 aa19.86■□□□□ 0.77
SMAD5-205ENST00000509297 CNOT7Q9UIV1 285 aaKnown RBP19.86■□□□□ 0.77
SMAD5-205ENST00000509297 COL4A1P02462 1669 aa19.86■□□□□ 0.77
SMAD5-205ENST00000509297 IL16Q14005 1332 aa19.85■□□□□ 0.77
SMAD5-205ENST00000509297 H7C1D1 291 aa19.85■□□□□ 0.77
SMAD5-205ENST00000509297 PDE8AO60658 829 aa19.85■□□□□ 0.77
SMAD5-205ENST00000509297 RPS12P25398 132 aaKnown RBP19.85■□□□□ 0.77
SMAD5-205ENST00000509297 ECE1P42892 770 aa19.85■□□□□ 0.77
SMAD5-205ENST00000509297 HIRAP54198 1017 aaPredicted RBP19.85■□□□□ 0.77
SMAD5-205ENST00000509297 FMR1Q06787 632 aaKnown RBP eCLIP19.85■□□□□ 0.77
SMAD5-205ENST00000509297 TSPYL6Q8N831 410 aa19.85■□□□□ 0.77
SMAD5-205ENST00000509297 TLL2Q9Y6L7 1015 aa19.85■□□□□ 0.77
SMAD5-205ENST00000509297 TRPM7Q96QT4 1865 aa19.85■□□□□ 0.77
SMAD5-205ENST00000509297 THSD7BQ9C0I4 1608 aa19.84■□□□□ 0.77
SMAD5-205ENST00000509297 CCDC184Q52MB2 194 aa19.84■□□□□ 0.77
SMAD5-205ENST00000509297 KSR2Q6VAB6 950 aa19.84■□□□□ 0.77
SMAD5-205ENST00000509297 WWC1Q8IX03 1113 aa19.84■□□□□ 0.77
SMAD5-205ENST00000509297 HHIPL1Q96JK4 782 aa19.84■□□□□ 0.77
SMAD5-205ENST00000509297 PSMD14O00487 310 aa19.83■□□□□ 0.77
SMAD5-205ENST00000509297 CDC37L1Q7L3B6 337 aa19.83■□□□□ 0.77
SMAD5-205ENST00000509297 MICALL2Q8IY33 904 aa19.83■□□□□ 0.77
SMAD5-205ENST00000509297 TRPM4Q8TD43 1214 aa19.83■□□□□ 0.77
SMAD5-205ENST00000509297 CAPNS2Q96L46 248 aa19.83■□□□□ 0.77
SMAD5-205ENST00000509297 DBNDD1Q9H9R9 158 aa19.83■□□□□ 0.77
SMAD5-205ENST00000509297 SEC31BQ9NQW1 1179 aa19.83■□□□□ 0.77
SMAD5-205ENST00000509297 MAP3K2Q9Y2U5 619 aa19.83■□□□□ 0.77
SMAD5-205ENST00000509297 RIMBP2O15034 1052 aa19.82■□□□□ 0.76
SMAD5-205ENST00000509297 ECE2O60344 883 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms