RNA–Protein interactions for RNA: ENST00000509176.5

CCSER1-209, Transcript of coiled-coil serine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSER1, Length 5,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-209ENST00000509176 SSX2IPQ9Y2D8 614 aa12.7□□□□□ -0.38
CCSER1-209ENST00000509176 MRPS9P82933 396 aaKnown RBP12.69□□□□□ -0.38
CCSER1-209ENST00000509176 MSL1Q68DK7 614 aa12.69□□□□□ -0.38
CCSER1-209ENST00000509176 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
CCSER1-209ENST00000509176 ANKRD2Q9GZV1 360 aa12.69□□□□□ -0.38
CCSER1-209ENST00000509176 PLCG2P16885 1265 aa12.69□□□□□ -0.38
CCSER1-209ENST00000509176 ESR2Q92731 530 aa12.69□□□□□ -0.38
CCSER1-209ENST00000509176 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
CCSER1-209ENST00000509176 PPIP5K1Q6PFW1 1433 aa12.69□□□□□ -0.38
CCSER1-209ENST00000509176 CCDC178Q5BJE1 867 aa12.69□□□□□ -0.38
CCSER1-209ENST00000509176 IQCEQ6IPM2 695 aa12.69□□□□□ -0.38
CCSER1-209ENST00000509176 BACH1O14867 736 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 SLC9C2Q5TAH2 1124 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 ARHGAP27Q6ZUM4 889 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 HMGN5P82970 282 aaKnown RBP12.68□□□□□ -0.38
CCSER1-209ENST00000509176 GRIPAP1Q4V328 841 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 PCDH11XQ9BZA7 1347 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 PCDH11YQ9BZA8 1340 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 MIGA1Q8NAN2 632 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 C6orf50Q9HD87 102 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 MRE11P49959 708 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 NAPAP54920 295 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 BRDTQ58F21 947 aaPredicted RBP12.68□□□□□ -0.38
CCSER1-209ENST00000509176 TSHZ3Q63HK5 1081 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 CCDC24Q8N4L8 307 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 CCDC113Q9H0I3 377 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 UHRF1BP1Q6BDS2 1440 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 ZNF608Q9ULD9 1512 aaPredicted RBP12.68□□□□□ -0.38
CCSER1-209ENST00000509176 ZNF526Q8TF50 670 aaPredicted RBP12.68□□□□□ -0.38
CCSER1-209ENST00000509176 FERMT1Q9BQL6 677 aa12.68□□□□□ -0.38
CCSER1-209ENST00000509176 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
CCSER1-209ENST00000509176 NBPF7P0C2Y1 421 aaPredicted RBP12.67□□□□□ -0.38
CCSER1-209ENST00000509176 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
CCSER1-209ENST00000509176 DHX37Q8IY37 1157 aaKnown RBP12.67□□□□□ -0.38
CCSER1-209ENST00000509176 KRT23Q9C075 422 aa12.67□□□□□ -0.38
CCSER1-209ENST00000509176 ORC3Q9UBD5 711 aaPredicted RBP12.67□□□□□ -0.38
CCSER1-209ENST00000509176 NCOA1Q15788 1441 aa12.67□□□□□ -0.38
CCSER1-209ENST00000509176 LMAN1P49257 510 aa12.67□□□□□ -0.38
CCSER1-209ENST00000509176 ZYXQ15942 572 aaKnown RBP12.67□□□□□ -0.38
CCSER1-209ENST00000509176 CPLX3Q8WVH0 158 aa12.67□□□□□ -0.38
CCSER1-209ENST00000509176 TOP2BQ02880 1626 aa12.67□□□□□ -0.38
CCSER1-209ENST00000509176 MAP3K11Q16584 847 aa12.66□□□□□ -0.38
CCSER1-209ENST00000509176 DPP8Q6V1X1 898 aaPredicted RBP12.66□□□□□ -0.38
CCSER1-209ENST00000509176 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
CCSER1-209ENST00000509176 RARSP54136 660 aaKnown RBP12.66□□□□□ -0.38
CCSER1-209ENST00000509176 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
CCSER1-209ENST00000509176 KDM5BQ9UGL1 1544 aa12.66□□□□□ -0.38
CCSER1-209ENST00000509176 AKNAD1Q5T1N1 836 aa12.66□□□□□ -0.38
CCSER1-209ENST00000509176 GOPCQ9HD26 462 aa12.66□□□□□ -0.38
CCSER1-209ENST00000509176 SH2B1Q9NRF2 756 aaPredicted RBP12.66□□□□□ -0.38
CCSER1-209ENST00000509176 PKD2L1Q9P0L9 805 aa12.66□□□□□ -0.38
CCSER1-209ENST00000509176 SAP30BPQ9UHR5 308 aaKnown RBP12.66□□□□□ -0.38
CCSER1-209ENST00000509176 NIM1KQ8IY84 436 aa12.66□□□□□ -0.38
CCSER1-209ENST00000509176 DCAF5Q96JK2 942 aa12.66□□□□□ -0.38
CCSER1-209ENST00000509176 NUP88Q99567 741 aaPredicted RBP12.66□□□□□ -0.38
CCSER1-209ENST00000509176 PLCD4Q9BRC7 762 aa12.66□□□□□ -0.38
CCSER1-209ENST00000509176 GINS2Q9Y248 185 aa12.66□□□□□ -0.38
CCSER1-209ENST00000509176 PDIA4P13667 645 aaKnown RBP12.65□□□□□ -0.38
CCSER1-209ENST00000509176 ZMYND15Q9H091 742 aa12.65□□□□□ -0.38
CCSER1-209ENST00000509176 MCM5P33992 734 aa12.65□□□□□ -0.38
CCSER1-209ENST00000509176 NEK1Q96PY6 1258 aa12.65□□□□□ -0.38
CCSER1-209ENST00000509176 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
CCSER1-209ENST00000509176 GRM8O00222 908 aa12.65□□□□□ -0.38
CCSER1-209ENST00000509176 CCDC117Q8IWD4 279 aaPredicted RBP12.65□□□□□ -0.38
CCSER1-209ENST00000509176 RGS22Q8NE09 1264 aa12.65□□□□□ -0.38
CCSER1-209ENST00000509176 DDX17Q92841 729 aaKnown RBP12.65□□□□□ -0.38
CCSER1-209ENST00000509176 PLCH2O75038 1416 aa12.65□□□□□ -0.38
CCSER1-209ENST00000509176 ABCA10Q8WWZ4 1543 aa12.65□□□□□ -0.38
CCSER1-209ENST00000509176 IL15P40933 162 aaPredicted RBP12.65□□□□□ -0.38
CCSER1-209ENST00000509176 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
CCSER1-209ENST00000509176 CCDC148Q8NFR7 591 aa12.65□□□□□ -0.38
CCSER1-209ENST00000509176 CCDC91Q7Z6B0 441 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 SH2D4AQ9H788 454 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 TIAM1Q13009 1591 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 PRPF4BQ13523 1007 aaKnown RBP12.64□□□□□ -0.39
CCSER1-209ENST00000509176 USP37Q86T82 979 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 MAGEB6Q8N7X4 407 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 LRRC27Q9C0I9 530 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 GGA1Q9UJY5 639 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 KLF18A0A0U1RQI7 1052 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 TMCO5BA8MYB1 307 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 GNAQP50148 359 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 SPOUT1Q5T280 376 aaKnown RBP12.64□□□□□ -0.39
CCSER1-209ENST00000509176 IMPG2Q9BZV3 1241 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 H7C1D1 291 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 ZFYP08048 801 aaPredicted RBP12.64□□□□□ -0.39
CCSER1-209ENST00000509176 ZBTB43O43298 467 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 ACTN2P35609 894 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 KSR2Q6VAB6 950 aa12.64□□□□□ -0.39
CCSER1-209ENST00000509176 SMCR8Q8TEV9 937 aaPredicted RBP12.64□□□□□ -0.39
CCSER1-209ENST00000509176 KRT13P13646 458 aa12.63□□□□□ -0.39
CCSER1-209ENST00000509176 ARL1P40616 181 aaPredicted RBP12.63□□□□□ -0.39
CCSER1-209ENST00000509176 LPXNO60711 386 aa12.63□□□□□ -0.39
CCSER1-209ENST00000509176 LUZP1Q86V48 1076 aa12.63□□□□□ -0.39
CCSER1-209ENST00000509176 CNNM2Q9H8M5 875 aa12.63□□□□□ -0.39
CCSER1-209ENST00000509176 EXOC1Q9NV70 894 aa12.63□□□□□ -0.39
CCSER1-209ENST00000509176 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
CCSER1-209ENST00000509176 NOP2P46087 812 aaKnown RBP12.63□□□□□ -0.39
CCSER1-209ENST00000509176 KIF22Q14807 665 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms