RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
SNCAIP-211ENST00000509023 KLHDC4Q8TBB5 520 aa18.41■□□□□ 0.54
SNCAIP-211ENST00000509023 PRR5LQ6MZQ0 368 aa18.4■□□□□ 0.54
SNCAIP-211ENST00000509023 GREM2Q9H772 168 aa18.4■□□□□ 0.54
SNCAIP-211ENST00000509023 PDZRN3Q9UPQ7 1066 aa18.4■□□□□ 0.54
SNCAIP-211ENST00000509023 APBB1O00213 710 aa18.39■□□□□ 0.53
SNCAIP-211ENST00000509023 MMP10P09238 476 aa18.39■□□□□ 0.53
SNCAIP-211ENST00000509023 PTPN12Q05209 780 aaKnown RBP18.39■□□□□ 0.53
SNCAIP-211ENST00000509023 CCDC57Q2TAC2 916 aa18.39■□□□□ 0.53
SNCAIP-211ENST00000509023 NUCB1Q02818 461 aa18.39■□□□□ 0.53
SNCAIP-211ENST00000509023 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
SNCAIP-211ENST00000509023 ANKRD45Q5TZF3 282 aa18.39■□□□□ 0.53
SNCAIP-211ENST00000509023 SKAP1Q86WV1 359 aa18.39■□□□□ 0.53
SNCAIP-211ENST00000509023 NOP58Q9Y2X3 529 aaKnown RBP18.39■□□□□ 0.53
SNCAIP-211ENST00000509023 ST5P78524 1137 aa18.38■□□□□ 0.53
SNCAIP-211ENST00000509023 C3orf67Q6ZVT6 689 aa18.38■□□□□ 0.53
SNCAIP-211ENST00000509023 SIL1Q9H173 461 aa18.38■□□□□ 0.53
SNCAIP-211ENST00000509023 COPRSQ9NQ92 184 aa18.38■□□□□ 0.53
SNCAIP-211ENST00000509023 CASZ1Q86V15 1759 aa18.38■□□□□ 0.53
SNCAIP-211ENST00000509023 TNRC6CQ9HCJ0 1690 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-211ENST00000509023 ITGA6P23229 1130 aa18.37■□□□□ 0.53
SNCAIP-211ENST00000509023 CCDC152Q4G0S7 254 aa18.37■□□□□ 0.53
SNCAIP-211ENST00000509023 NLRP3Q96P20 1036 aa18.37■□□□□ 0.53
SNCAIP-211ENST00000509023 PARP3Q9Y6F1 533 aa18.37■□□□□ 0.53
SNCAIP-211ENST00000509023 OS9Q13438 667 aaPredicted RBP18.37■□□□□ 0.53
SNCAIP-211ENST00000509023 HSP90AB4PQ58FF6 505 aa18.37■□□□□ 0.53
SNCAIP-211ENST00000509023 CHD1LQ86WJ1 897 aa18.37■□□□□ 0.53
SNCAIP-211ENST00000509023 ZNF594Q96JF6 807 aaPredicted RBP18.37■□□□□ 0.53
SNCAIP-211ENST00000509023 NRXN2Q9P2S2 1712 aa18.37■□□□□ 0.53
SNCAIP-211ENST00000509023 ANKRD18BA2A2Z9 1011 aa18.36■□□□□ 0.53
SNCAIP-211ENST00000509023 RAB11FIP3O75154 756 aa18.36■□□□□ 0.53
SNCAIP-211ENST00000509023 SF3B3Q15393 1217 aaKnown RBP18.36■□□□□ 0.53
SNCAIP-211ENST00000509023 SLC16A10Q8TF71 515 aa18.36■□□□□ 0.53
SNCAIP-211ENST00000509023 LNPKQ9C0E8 428 aa18.36■□□□□ 0.53
SNCAIP-211ENST00000509023 G3BP1Q13283 466 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNCAIP-211ENST00000509023 R3HDM1Q15032 1099 aaKnown RBP18.35■□□□□ 0.53
SNCAIP-211ENST00000509023 TAF7LQ5H9L4 462 aa18.35■□□□□ 0.53
SNCAIP-211ENST00000509023 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
SNCAIP-211ENST00000509023 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
SNCAIP-211ENST00000509023 RIC1Q4ADV7 1423 aa18.35■□□□□ 0.53
SNCAIP-211ENST00000509023 RTL9Q8NET4 1388 aa18.35■□□□□ 0.53
SNCAIP-211ENST00000509023 SMARCA5O60264 1052 aaPredicted RBP18.35■□□□□ 0.53
SNCAIP-211ENST00000509023 BCL11AQ9H165 835 aa18.34■□□□□ 0.53
SNCAIP-211ENST00000509023 SEC31BQ9NQW1 1179 aa18.34■□□□□ 0.53
SNCAIP-211ENST00000509023 ERC1Q8IUD2 1116 aa18.33■□□□□ 0.53
SNCAIP-211ENST00000509023 RHPN1Q8TCX5 695 aa18.33■□□□□ 0.53
SNCAIP-211ENST00000509023 KIF1BPQ96EK5 621 aa18.33■□□□□ 0.53
SNCAIP-211ENST00000509023 RGS3P49796 1198 aa18.32■□□□□ 0.52
SNCAIP-211ENST00000509023 EYA2O00167 538 aa18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 SASH1O94885 1247 aa18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 PDE4AP27815 886 aa18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 LRRC24Q50LG9 513 aa18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 PUS3Q9BZE2 481 aaKnown RBP18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 IL1RAPL2Q9NP60 686 aa18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 LRP5O75197 1615 aa18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 CIAO1O76071 339 aa18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 ZBTB7AO95365 584 aa18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 ATG9AQ7Z3C6 839 aa18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 FBXO3Q9UK99 471 aa18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 ANKRD31Q8N7Z5 1873 aa18.31■□□□□ 0.52
SNCAIP-211ENST00000509023 PSDA5PKW4 1024 aaPredicted RBP18.3■□□□□ 0.52
SNCAIP-211ENST00000509023 LDHAL6AQ6ZMR3 332 aa18.3■□□□□ 0.52
SNCAIP-211ENST00000509023 CDC5LQ99459 802 aaKnown RBP18.3■□□□□ 0.52
SNCAIP-211ENST00000509023 COL4A1P02462 1669 aa18.3■□□□□ 0.52
SNCAIP-211ENST00000509023 IL15P40933 162 aaPredicted RBP18.3■□□□□ 0.52
SNCAIP-211ENST00000509023 CRY2Q49AN0 593 aa18.3■□□□□ 0.52
SNCAIP-211ENST00000509023 BRIP1Q9BX63 1249 aa18.3■□□□□ 0.52
SNCAIP-211ENST00000509023 IGHMBP2P38935 993 aaKnown RBP18.29■□□□□ 0.52
SNCAIP-211ENST00000509023 C16orf71Q8IYS4 520 aaPredicted RBP18.29■□□□□ 0.52
SNCAIP-211ENST00000509023 MTFR1LQ9H019 292 aa18.29■□□□□ 0.52
SNCAIP-211ENST00000509023 CNNM1Q9NRU3 951 aa18.29■□□□□ 0.52
SNCAIP-211ENST00000509023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.29■□□□□ 0.52
SNCAIP-211ENST00000509023 SPEF2Q9C093 1822 aa18.29■□□□□ 0.52
SNCAIP-211ENST00000509023 TAF1P21675 1872 aa18.28■□□□□ 0.52
SNCAIP-211ENST00000509023 TFCP2Q12800 502 aa18.28■□□□□ 0.52
SNCAIP-211ENST00000509023 DDX46Q7L014 1031 aaKnown RBP18.28■□□□□ 0.52
SNCAIP-211ENST00000509023 MPHOSPH8Q99549 860 aa18.28■□□□□ 0.52
SNCAIP-211ENST00000509023 KLRG2A4D1S0 409 aaPredicted RBP18.28■□□□□ 0.52
SNCAIP-211ENST00000509023 ANKRD18AQ8IVF6 992 aa18.28■□□□□ 0.52
SNCAIP-211ENST00000509023 CLASRPQ8N2M8 674 aaKnown RBP18.28■□□□□ 0.52
SNCAIP-211ENST00000509023 RPGRQ92834 1020 aaKnown RBP18.28■□□□□ 0.52
SNCAIP-211ENST00000509023 CELF1Q92879 486 aaKnown RBP18.28■□□□□ 0.52
SNCAIP-211ENST00000509023 RIPOR2Q9Y4F9 1068 aa18.28■□□□□ 0.52
SNCAIP-211ENST00000509023 OTUD7AQ8TE49 926 aaPredicted RBP18.27■□□□□ 0.52
SNCAIP-211ENST00000509023 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
SNCAIP-211ENST00000509023 PDE6BP35913 854 aa18.26■□□□□ 0.51
SNCAIP-211ENST00000509023 RPS8P62241 208 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-211ENST00000509023 METTL24Q5JXM2 366 aa18.25■□□□□ 0.51
SNCAIP-211ENST00000509023 CEP126Q9P2H0 1117 aa18.25■□□□□ 0.51
SNCAIP-211ENST00000509023 GRAPQ13588 217 aa18.24■□□□□ 0.51
SNCAIP-211ENST00000509023 AACSQ86V21 672 aa18.24■□□□□ 0.51
SNCAIP-211ENST00000509023 PLEKHM2Q8IWE5 1019 aa18.24■□□□□ 0.51
SNCAIP-211ENST00000509023 GRAPLQ8TC17 118 aaPredicted RBP18.24■□□□□ 0.51
SNCAIP-211ENST00000509023 EAF2Q96CJ1 260 aaPredicted RBP18.24■□□□□ 0.51
SNCAIP-211ENST00000509023 RBM17Q96I25 401 aaKnown RBP18.24■□□□□ 0.51
SNCAIP-211ENST00000509023 BSDC1Q9NW68 430 aaPredicted RBP18.24■□□□□ 0.51
SNCAIP-211ENST00000509023 MROH5Q6ZUA9 1318 aa18.24■□□□□ 0.51
SNCAIP-211ENST00000509023 POLD1P28340 1107 aa18.24■□□□□ 0.51
SNCAIP-211ENST00000509023 TNNI3KQ59H18 835 aa18.24■□□□□ 0.51
SNCAIP-211ENST00000509023 FPGT-TNNI3KV9GXZ4 949 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms