RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 JDP2Q8WYK2 163 aa19.04■□□□□ 0.64
UBE2D3-228ENST00000508974 CHMP4AQ9BY43 222 aa19.04■□□□□ 0.64
UBE2D3-228ENST00000508974 LRRC37AA6NMS7 1700 aa19.03■□□□□ 0.64
UBE2D3-228ENST00000508974 POTEIP0CG38 1075 aa19.03■□□□□ 0.64
UBE2D3-228ENST00000508974 POTEJP0CG39 1038 aa19.03■□□□□ 0.64
UBE2D3-228ENST00000508974 GRAPQ13588 217 aa19.03■□□□□ 0.64
UBE2D3-228ENST00000508974 WDR63Q8IWG1 891 aa19.03■□□□□ 0.64
UBE2D3-228ENST00000508974 GRAPLQ8TC17 118 aaPredicted RBP19.03■□□□□ 0.64
UBE2D3-228ENST00000508974 METTL22Q9BUU2 404 aaPredicted RBP19.03■□□□□ 0.64
UBE2D3-228ENST00000508974 SPINK5Q9NQ38 1064 aaPredicted RBP19.03■□□□□ 0.64
UBE2D3-228ENST00000508974 PI4KAP2A4QPH2 592 aa19.02■□□□□ 0.64
UBE2D3-228ENST00000508974 PPIP5K2O43314 1243 aa19.02■□□□□ 0.64
UBE2D3-228ENST00000508974 BBOX1O75936 387 aa19.02■□□□□ 0.64
UBE2D3-228ENST00000508974 EXOSC9Q06265 439 aaKnown RBP19.02■□□□□ 0.64
UBE2D3-228ENST00000508974 TRIM28Q13263 835 aaKnown RBP19.02■□□□□ 0.64
UBE2D3-228ENST00000508974 AOC3Q16853 763 aa19.02■□□□□ 0.64
UBE2D3-228ENST00000508974 DPP8Q6V1X1 898 aaPredicted RBP19.02■□□□□ 0.64
UBE2D3-228ENST00000508974 PI4KAP1Q8N8J0 262 aa19.02■□□□□ 0.64
UBE2D3-228ENST00000508974 ZBTB38Q8NAP3 1195 aaPredicted RBP19.02■□□□□ 0.64
UBE2D3-228ENST00000508974 CWC25Q9NXE8 425 aaPredicted RBP19.02■□□□□ 0.64
UBE2D3-228ENST00000508974 GJA3Q9Y6H8 435 aa19.02■□□□□ 0.64
UBE2D3-228ENST00000508974 FZD9O00144 591 aa19.01■□□□□ 0.63
UBE2D3-228ENST00000508974 GRIPAP1Q4V328 841 aa19.01■□□□□ 0.63
UBE2D3-228ENST00000508974 KSR2Q6VAB6 950 aa19.01■□□□□ 0.63
UBE2D3-228ENST00000508974 SP8Q8IXZ3 490 aa19.01■□□□□ 0.63
UBE2D3-228ENST00000508974 CELF1Q92879 486 aaKnown RBP19.01■□□□□ 0.63
UBE2D3-228ENST00000508974 SPEF2Q9C093 1822 aa19.01■□□□□ 0.63
UBE2D3-228ENST00000508974 EIF6P56537 245 aaKnown RBP19■□□□□ 0.63
UBE2D3-228ENST00000508974 MPNDQ8N594 471 aa19■□□□□ 0.63
UBE2D3-228ENST00000508974 CCDC191Q8NCU4 936 aa19■□□□□ 0.63
UBE2D3-228ENST00000508974 CCDC85AQ96PX6 553 aaPredicted RBP19■□□□□ 0.63
UBE2D3-228ENST00000508974 CACNA1FO60840 1977 aa19■□□□□ 0.63
UBE2D3-228ENST00000508974 MYH3P11055 1940 aa19■□□□□ 0.63
UBE2D3-228ENST00000508974 DUOX1Q9NRD9 1551 aa18.99■□□□□ 0.63
UBE2D3-228ENST00000508974 IQCA1LA6NCM1 817 aa18.99■□□□□ 0.63
UBE2D3-228ENST00000508974 SF3B3Q15393 1217 aaKnown RBP18.99■□□□□ 0.63
UBE2D3-228ENST00000508974 CWF19L2Q2TBE0 894 aaKnown RBP18.99■□□□□ 0.63
UBE2D3-228ENST00000508974 EAPPQ56P03 285 aaPredicted RBP18.99■□□□□ 0.63
UBE2D3-228ENST00000508974 NIM1KQ8IY84 436 aa18.99■□□□□ 0.63
UBE2D3-228ENST00000508974 L3MBTL3Q96JM7 780 aaPredicted RBP18.99■□□□□ 0.63
UBE2D3-228ENST00000508974 U3KPZ7 1027 aaPredicted RBP18.99■□□□□ 0.63
UBE2D3-228ENST00000508974 LTBP1Q14766 1721 aa18.98■□□□□ 0.63
UBE2D3-228ENST00000508974 PCCAP05165 728 aaPredicted RBP18.98■□□□□ 0.63
UBE2D3-228ENST00000508974 IGKV5-2P06315 115 aa18.98■□□□□ 0.63
UBE2D3-228ENST00000508974 NEXNQ0ZGT2 675 aa18.98■□□□□ 0.63
UBE2D3-228ENST00000508974 GPC2Q8N158 579 aa18.98■□□□□ 0.63
UBE2D3-228ENST00000508974 TAF1DQ9H5J8 278 aaPredicted RBP18.98■□□□□ 0.63
UBE2D3-228ENST00000508974 SEC31BQ9NQW1 1179 aa18.98■□□□□ 0.63
UBE2D3-228ENST00000508974 VAMP4O75379 141 aa18.97■□□□□ 0.63
UBE2D3-228ENST00000508974 FLIIQ13045 1269 aa18.97■□□□□ 0.63
UBE2D3-228ENST00000508974 FKBP5Q13451 457 aaPredicted RBP18.97■□□□□ 0.63
UBE2D3-228ENST00000508974 SUPT20HQ8NEM7 779 aa18.97■□□□□ 0.63
UBE2D3-228ENST00000508974 HACL1Q9UJ83 578 aa18.97■□□□□ 0.63
UBE2D3-228ENST00000508974 CHADLQ6NUI6 762 aa18.96■□□□□ 0.63
UBE2D3-228ENST00000508974 MYH16Q9H6N6 1097 aa18.96■□□□□ 0.63
UBE2D3-228ENST00000508974 CLEC11AQ9Y240 323 aa18.96■□□□□ 0.63
UBE2D3-228ENST00000508974 PDE8AO60658 829 aa18.95■□□□□ 0.62
UBE2D3-228ENST00000508974 EPHX2P34913 555 aa18.95■□□□□ 0.62
UBE2D3-228ENST00000508974 TMC4Q7Z404 712 aa18.95■□□□□ 0.62
UBE2D3-228ENST00000508974 RTFDC1Q9BY42 306 aaPredicted RBP18.95■□□□□ 0.62
UBE2D3-228ENST00000508974 NSFL1CQ9UNZ2 370 aaKnown RBP18.95■□□□□ 0.62
UBE2D3-228ENST00000508974 ADAMTSL1Q8N6G6 1762 aa18.94■□□□□ 0.62
UBE2D3-228ENST00000508974 NEURL1BA8MQ27 555 aa18.94■□□□□ 0.62
UBE2D3-228ENST00000508974 HSP90B1P14625 803 aaKnown RBP18.94■□□□□ 0.62
UBE2D3-228ENST00000508974 GPSM2P81274 684 aa18.94■□□□□ 0.62
UBE2D3-228ENST00000508974 CCDC152Q4G0S7 254 aa18.94■□□□□ 0.62
UBE2D3-228ENST00000508974 GPR101Q96P66 508 aaPredicted RBP18.94■□□□□ 0.62
UBE2D3-228ENST00000508974 C6orf229H3BNL8 230 aa18.93■□□□□ 0.62
UBE2D3-228ENST00000508974 RIMBP2O15034 1052 aa18.93■□□□□ 0.62
UBE2D3-228ENST00000508974 LMOD1P29536 600 aaPredicted RBP18.93■□□□□ 0.62
UBE2D3-228ENST00000508974 RPS8P62241 208 aaKnown RBP18.93■□□□□ 0.62
UBE2D3-228ENST00000508974 KIAA2012Q0VF49 1180 aa18.93■□□□□ 0.62
UBE2D3-228ENST00000508974 DNAJC5GQ8N7S2 189 aa18.93■□□□□ 0.62
UBE2D3-228ENST00000508974 UBE3BQ7Z3V4 1068 aa18.92■□□□□ 0.62
UBE2D3-228ENST00000508974 LDHDQ86WU2 507 aa18.92■□□□□ 0.62
UBE2D3-228ENST00000508974 DNAAF4Q8WXU2 420 aa18.92■□□□□ 0.62
UBE2D3-228ENST00000508974 ZNRF3Q9ULT6 936 aa18.92■□□□□ 0.62
UBE2D3-228ENST00000508974 CDHR2Q9BYE9 1310 aa18.92■□□□□ 0.62
UBE2D3-228ENST00000508974 F6X3S4 739 aa18.91■□□□□ 0.62
UBE2D3-228ENST00000508974 RAD17O75943 681 aa18.91■□□□□ 0.62
UBE2D3-228ENST00000508974 EPS15P42566 896 aa18.91■□□□□ 0.62
UBE2D3-228ENST00000508974 SCNN1DP51172 638 aa18.91■□□□□ 0.62
UBE2D3-228ENST00000508974 CTSWP56202 376 aa18.91■□□□□ 0.62
UBE2D3-228ENST00000508974 CXCL9Q07325 125 aa18.91■□□□□ 0.62
UBE2D3-228ENST00000508974 VPS33BQ9H267 617 aa18.91■□□□□ 0.62
UBE2D3-228ENST00000508974 POLLQ9UGP5 575 aa18.91■□□□□ 0.62
UBE2D3-228ENST00000508974 WASHC4Q2M389 1173 aa18.9■□□□□ 0.62
UBE2D3-228ENST00000508974 DBNDD1Q9H9R9 158 aa18.9■□□□□ 0.62
UBE2D3-228ENST00000508974 ZNF521Q96K83 1311 aa18.9■□□□□ 0.62
UBE2D3-228ENST00000508974 GCKRQ14397 625 aa18.89■□□□□ 0.61
UBE2D3-228ENST00000508974 MAP1SQ66K74 1059 aaPredicted RBP18.89■□□□□ 0.61
UBE2D3-228ENST00000508974 CIAPIN1Q6FI81 312 aa18.89■□□□□ 0.61
UBE2D3-228ENST00000508974 PNMA8AQ86V59 439 aaPredicted RBP18.89■□□□□ 0.61
UBE2D3-228ENST00000508974 ANKIB1Q9P2G1 1089 aa18.89■□□□□ 0.61
UBE2D3-228ENST00000508974 YDJCA8MPS7 323 aa18.88■□□□□ 0.61
UBE2D3-228ENST00000508974 GMPSP49915 693 aaPredicted RBP18.88■□□□□ 0.61
UBE2D3-228ENST00000508974 DOK7Q18PE1 504 aa18.88■□□□□ 0.61
UBE2D3-228ENST00000508974 ANKRD18AQ8IVF6 992 aa18.88■□□□□ 0.61
UBE2D3-228ENST00000508974 TTLL11Q8NHH1 800 aa18.88■□□□□ 0.61
UBE2D3-228ENST00000508974 TBC1D16Q8TBP0 767 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms