RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 RARAP10276 462 aa13.08□□□□□ -0.32
CHD1-205ENST00000508756 TBC1D8BQ0IIM8 1120 aa13.08□□□□□ -0.32
CHD1-205ENST00000508756 EDARADDQ8WWZ3 215 aa13.08□□□□□ -0.32
CHD1-205ENST00000508756 IGFLR1Q9H665 355 aa13.08□□□□□ -0.32
CHD1-205ENST00000508756 A6NHS1 94 aa13.07□□□□□ -0.32
CHD1-205ENST00000508756 ARHGEF15O94989 841 aa13.07□□□□□ -0.32
CHD1-205ENST00000508756 GGNBP2Q9H3C7 697 aa13.07□□□□□ -0.32
CHD1-205ENST00000508756 EFCC1Q9HA90 598 aa13.07□□□□□ -0.32
CHD1-205ENST00000508756 KCTD17Q8N5Z5 321 aa13.06□□□□□ -0.32
CHD1-205ENST00000508756 TNFRSF25Q93038 417 aa13.06□□□□□ -0.32
CHD1-205ENST00000508756 MDFIQ99750 246 aa13.06□□□□□ -0.32
CHD1-205ENST00000508756 BIN2Q9UBW5 565 aaPredicted RBP13.06□□□□□ -0.32
CHD1-205ENST00000508756 FNDC3AQ9Y2H6 1198 aaKnown RBP13.06□□□□□ -0.32
CHD1-205ENST00000508756 PATL2C9JE40 543 aaKnown RBP13.05□□□□□ -0.32
CHD1-205ENST00000508756 C8orf34Q49A92 452 aa13.05□□□□□ -0.32
CHD1-205ENST00000508756 UBE2OQ9C0C9 1292 aaKnown RBP13.05□□□□□ -0.32
CHD1-205ENST00000508756 LRRC4BQ9NT99 713 aa13.05□□□□□ -0.32
CHD1-205ENST00000508756 ELOA3CA0A087WX78 387 aaPredicted RBP13.04□□□□□ -0.32
CHD1-205ENST00000508756 ELOA3DA6NLF2 546 aaPredicted RBP13.04□□□□□ -0.32
CHD1-205ENST00000508756 MAP3K6O95382 1288 aa13.04□□□□□ -0.32
CHD1-205ENST00000508756 PCSK2P16519 638 aa13.04□□□□□ -0.32
CHD1-205ENST00000508756 ADH7P40394 386 aa13.04□□□□□ -0.32
CHD1-205ENST00000508756 ELOA3BQ3SY89 546 aa13.04□□□□□ -0.32
CHD1-205ENST00000508756 NLRP13Q86W25 1043 aa13.04□□□□□ -0.32
CHD1-205ENST00000508756 ELOA3Q8NG57 546 aa13.04□□□□□ -0.32
CHD1-205ENST00000508756 ADARB2-AS1A8MUL3 147 aa13.03□□□□□ -0.32
CHD1-205ENST00000508756 MMP20O60882 483 aa13.03□□□□□ -0.32
CHD1-205ENST00000508756 DHX32Q7L7V1 743 aaKnown RBP13.03□□□□□ -0.32
CHD1-205ENST00000508756 DNAJB12Q9NXW2 375 aaKnown RBP13.03□□□□□ -0.32
CHD1-205ENST00000508756 NEDD1Q8NHV4 660 aa13.02□□□□□ -0.33
CHD1-205ENST00000508756 BRPF3Q9ULD4 1205 aa13.02□□□□□ -0.33
CHD1-205ENST00000508756 RPLP1P05386 114 aaKnown RBP13.01□□□□□ -0.33
CHD1-205ENST00000508756 ZNF438Q7Z4V0 828 aa13.01□□□□□ -0.33
CHD1-205ENST00000508756 ELP3Q9H9T3 547 aa13.01□□□□□ -0.33
CHD1-205ENST00000508756 ENAMQ9NRM1 1142 aa13.01□□□□□ -0.33
CHD1-205ENST00000508756 TMEM63CQ9P1W3 806 aa13.01□□□□□ -0.33
CHD1-205ENST00000508756 AMPD1P23109 780 aa13□□□□□ -0.33
CHD1-205ENST00000508756 MLLT1Q03111 559 aaPredicted RBP13□□□□□ -0.33
CHD1-205ENST00000508756 PDE12Q6L8Q7 609 aaKnown RBP13□□□□□ -0.33
CHD1-205ENST00000508756 GJD3Q8N144 294 aa13□□□□□ -0.33
CHD1-205ENST00000508756 TTC16Q8NEE8 873 aa13□□□□□ -0.33
CHD1-205ENST00000508756 BTBD6Q96KE9 485 aa13□□□□□ -0.33
CHD1-205ENST00000508756 TLR7Q9NYK1 1049 aaKnown RBP13□□□□□ -0.33
CHD1-205ENST00000508756 SLC6A14Q9UN76 642 aa13□□□□□ -0.33
CHD1-205ENST00000508756 NDUFB5O43674 189 aa12.99□□□□□ -0.33
CHD1-205ENST00000508756 USP5P45974 858 aa12.99□□□□□ -0.33
CHD1-205ENST00000508756 CHSY3Q70JA7 882 aa12.99□□□□□ -0.33
CHD1-205ENST00000508756 ADAMTS8Q9UP79 889 aa12.99□□□□□ -0.33
CHD1-205ENST00000508756 ZBTB42B2RXF5 422 aa12.98□□□□□ -0.33
CHD1-205ENST00000508756 ALAS2P22557 587 aa12.98□□□□□ -0.33
CHD1-205ENST00000508756 ABI2Q9NYB9 513 aaPredicted RBP12.98□□□□□ -0.33
CHD1-205ENST00000508756 STK17AQ9UEE5 414 aa12.98□□□□□ -0.33
CHD1-205ENST00000508756 PSAPP07602 524 aa12.97□□□□□ -0.33
CHD1-205ENST00000508756 TTC39BQ5VTQ0 682 aaPredicted RBP12.97□□□□□ -0.33
CHD1-205ENST00000508756 TRPM4Q8TD43 1214 aa12.97□□□□□ -0.33
CHD1-205ENST00000508756 NAGPAQ9UK23 515 aa12.97□□□□□ -0.33
CHD1-205ENST00000508756 GPLD1P80108 840 aa12.96□□□□□ -0.33
CHD1-205ENST00000508756 XKR5Q6UX68 686 aa12.96□□□□□ -0.33
CHD1-205ENST00000508756 NSUN5Q96P11 429 aaKnown RBP12.96□□□□□ -0.33
CHD1-205ENST00000508756 RRAGCQ9HB90 399 aa12.96□□□□□ -0.33
CHD1-205ENST00000508756 CNTN3Q9P232 1028 aa12.96□□□□□ -0.33
CHD1-205ENST00000508756 STARD13Q9Y3M8 1113 aa12.96□□□□□ -0.33
CHD1-205ENST00000508756 CYP2E1P05181 493 aaPredicted RBP12.95□□□□□ -0.34
CHD1-205ENST00000508756 NRLP54845 237 aa12.95□□□□□ -0.34
CHD1-205ENST00000508756 PLAURQ03405 335 aa12.95□□□□□ -0.34
CHD1-205ENST00000508756 HFE2Q6ZVN8 426 aa12.95□□□□□ -0.34
CHD1-205ENST00000508756 OR13H1Q8NG92 308 aa12.95□□□□□ -0.34
CHD1-205ENST00000508756 FAM181BA6NEQ2 426 aa12.94□□□□□ -0.34
CHD1-205ENST00000508756 CPB1P15086 417 aa12.94□□□□□ -0.34
CHD1-205ENST00000508756 HOXB4P17483 251 aaPredicted RBP12.94□□□□□ -0.34
CHD1-205ENST00000508756 SNRPNP63162 240 aaKnown RBP12.94□□□□□ -0.34
CHD1-205ENST00000508756 FAM35AQ86V20 835 aa12.94□□□□□ -0.34
CHD1-205ENST00000508756 SOX18P35713 384 aa12.93□□□□□ -0.34
CHD1-205ENST00000508756 EHHADHQ08426 723 aa12.93□□□□□ -0.34
CHD1-205ENST00000508756 COL13A1Q5TAT6 717 aaPredicted RBP12.93□□□□□ -0.34
CHD1-205ENST00000508756 FOXD3Q9UJU5 478 aaPredicted RBP12.93□□□□□ -0.34
CHD1-205ENST00000508756 J3QW42 95 aa12.92□□□□□ -0.34
CHD1-205ENST00000508756 TNFRSF21O75509 655 aa12.92□□□□□ -0.34
CHD1-205ENST00000508756 ALBP02768 609 aa12.92□□□□□ -0.34
CHD1-205ENST00000508756 HOXD8P13378 290 aaPredicted RBP12.92□□□□□ -0.34
CHD1-205ENST00000508756 C1orf127Q8N9H9 656 aa12.92□□□□□ -0.34
CHD1-205ENST00000508756 TMC1Q8TDI8 760 aa12.92□□□□□ -0.34
CHD1-205ENST00000508756 FAM129BQ96TA1 746 aa12.92□□□□□ -0.34
CHD1-205ENST00000508756 DCTN4Q9UJW0 460 aa12.92□□□□□ -0.34
CHD1-205ENST00000508756 MAPK1P28482 360 aa12.91□□□□□ -0.34
CHD1-205ENST00000508756 MARSP56192 900 aaKnown RBP12.91□□□□□ -0.34
CHD1-205ENST00000508756 PCSK7Q16549 785 aa12.91□□□□□ -0.34
CHD1-205ENST00000508756 SND1Q7KZF4 910 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHD1-205ENST00000508756 CHRDQ9H2X0 955 aa12.91□□□□□ -0.34
CHD1-205ENST00000508756 KANSL3Q9P2N6 904 aa12.91□□□□□ -0.34
CHD1-205ENST00000508756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.91□□□□□ -0.34
CHD1-205ENST00000508756 DGKGP49619 791 aa12.9□□□□□ -0.34
CHD1-205ENST00000508756 PSAPL1Q6NUJ1 521 aa12.9□□□□□ -0.34
CHD1-205ENST00000508756 C8orf86Q6ZUL3 223 aa12.9□□□□□ -0.34
CHD1-205ENST00000508756 CITED4Q96RK1 184 aa12.9□□□□□ -0.34
CHD1-205ENST00000508756 RBCK1Q9BYM8 510 aa12.9□□□□□ -0.34
CHD1-205ENST00000508756 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
CHD1-205ENST00000508756 PHF20L1A8MW92 1017 aa12.89□□□□□ -0.35
CHD1-205ENST00000508756 M0R082 166 aa12.89□□□□□ -0.35
CHD1-205ENST00000508756 GPR182O15218 404 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms