RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 SGSM2O43147 1006 aa13.94□□□□□ -0.18
PRPF40B-203ENST00000508736 PCCAP05165 728 aaPredicted RBP13.94□□□□□ -0.18
PRPF40B-203ENST00000508736 KIAA1211Q6ZU35 1233 aa13.94□□□□□ -0.18
PRPF40B-203ENST00000508736 KLHDC4Q8TBB5 520 aa13.94□□□□□ -0.18
PRPF40B-203ENST00000508736 RUFY2Q8WXA3 655 aa13.94□□□□□ -0.18
PRPF40B-203ENST00000508736 GPR108Q9NPR9 543 aa13.94□□□□□ -0.18
PRPF40B-203ENST00000508736 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
PRPF40B-203ENST00000508736 RAD50Q92878 1312 aa13.94□□□□□ -0.18
PRPF40B-203ENST00000508736 RREB1Q92766 1687 aa13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 HIP1O00291 1037 aa13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 HSPA4P34932 840 aa13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 CUL4AQ13619 759 aa13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 TNNI3KQ59H18 835 aa13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 MCTP1Q6DN14 999 aa13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 ZGPATQ8N5A5 531 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 JARID2Q92833 1246 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 PALD1Q9ULE6 856 aa13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 FPGT-TNNI3KV9GXZ4 949 aa13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 CDHR2Q9BYE9 1310 aa13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 ZNF831Q5JPB2 1677 aa13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 ZBTB38Q8NAP3 1195 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 ANKRD36CQ5JPF3 1778 aa13.93□□□□□ -0.18
PRPF40B-203ENST00000508736 CIAO1O76071 339 aa13.92□□□□□ -0.18
PRPF40B-203ENST00000508736 IL15P40933 162 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-203ENST00000508736 CCDC8Q9H0W5 538 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-203ENST00000508736 DIAPH3Q9NSV4 1193 aa13.92□□□□□ -0.18
PRPF40B-203ENST00000508736 ZBTB1Q9Y2K1 713 aa13.92□□□□□ -0.18
PRPF40B-203ENST00000508736 ATP5JP18859 108 aa13.91□□□□□ -0.18
PRPF40B-203ENST00000508736 TFCP2Q12800 502 aa13.91□□□□□ -0.18
PRPF40B-203ENST00000508736 TICAM2Q86XR7 235 aa13.91□□□□□ -0.18
PRPF40B-203ENST00000508736 SMARCC1Q92922 1105 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-203ENST00000508736 MAP4K4O95819 1239 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-203ENST00000508736 CSF1RP07333 972 aa13.91□□□□□ -0.18
PRPF40B-203ENST00000508736 ATG9AQ7Z3C6 839 aa13.91□□□□□ -0.18
PRPF40B-203ENST00000508736 SNRKQ9NRH2 765 aa13.91□□□□□ -0.18
PRPF40B-203ENST00000508736 TLR7Q9NYK1 1049 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-203ENST00000508736 ZNF330Q9Y3S2 320 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-203ENST00000508736 RFX7Q2KHR2 1363 aa13.9□□□□□ -0.18
PRPF40B-203ENST00000508736 EYA2O00167 538 aa13.9□□□□□ -0.18
PRPF40B-203ENST00000508736 EIF5P55010 431 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-203ENST00000508736 NLRP10Q86W26 655 aa13.9□□□□□ -0.18
PRPF40B-203ENST00000508736 DBNLQ9UJU6 430 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-203ENST00000508736 LOC102724428A0A0B4J2F2 783 aa13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 SIK1P57059 783 aa13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 PKP1Q13835 747 aa13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 PANK2Q9BZ23 570 aa13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 LSG1Q9H089 658 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 IL25Q9H293 177 aa13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 LMBRD1Q9NUN5 540 aa13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 CCDC87Q9NVE4 849 aa13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 HLFQ16534 295 aa13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 INTS5Q6P9B9 1019 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 DZIP3Q86Y13 1208 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 CHMP3Q9Y3E7 222 aa13.89□□□□□ -0.19
PRPF40B-203ENST00000508736 PALLDQ8WX93 1383 aa13.88□□□□□ -0.19
PRPF40B-203ENST00000508736 APBA3O96018 575 aa13.88□□□□□ -0.19
PRPF40B-203ENST00000508736 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
PRPF40B-203ENST00000508736 CWC27Q6UX04 472 aaKnown RBP13.88□□□□□ -0.19
PRPF40B-203ENST00000508736 UPF3BQ9BZI7 483 aaKnown RBP13.88□□□□□ -0.19
PRPF40B-203ENST00000508736 ZDHHC9Q9Y397 364 aa13.88□□□□□ -0.19
PRPF40B-203ENST00000508736 SBF2Q86WG5 1849 aa13.88□□□□□ -0.19
PRPF40B-203ENST00000508736 BRD1O95696 1058 aa13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 MBD3O95983 291 aa13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 NUP98P52948 1817 aa13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 CCDC57Q2TAC2 916 aa13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 ZNF34Q8IZ26 560 aa13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 ANP32BQ92688 251 aaKnown RBP13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 AK7Q96M32 723 aa13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 SNX14Q9Y5W7 946 aa13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 NHSQ6T4R5 1651 aa13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 NCLP19338 710 aaKnown RBP13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 ZNF445P59923 1031 aa13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 FAM89AQ96GI7 184 aa13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 BOLA2Q9H3K6 86 aa13.87□□□□□ -0.19
PRPF40B-203ENST00000508736 ZNF609O15014 1411 aa13.86□□□□□ -0.19
PRPF40B-203ENST00000508736 WDR33Q9C0J8 1336 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-203ENST00000508736 CRKLP46109 303 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-203ENST00000508736 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-203ENST00000508736 HAUS7Q99871 368 aa13.86□□□□□ -0.19
PRPF40B-203ENST00000508736 COL5A3P25940 1745 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-203ENST00000508736 RGL2O15211 777 aa13.85□□□□□ -0.19
PRPF40B-203ENST00000508736 PRPF40AO75400 957 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-203ENST00000508736 KCNQ4P56696 695 aa13.85□□□□□ -0.19
PRPF40B-203ENST00000508736 CAVIN1Q6NZI2 390 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-203ENST00000508736 ILDR2Q71H61 639 aa13.85□□□□□ -0.19
PRPF40B-203ENST00000508736 GAS2L3Q86XJ1 694 aa13.85□□□□□ -0.19
PRPF40B-203ENST00000508736 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRPF40B-203ENST00000508736 KCNB2Q92953 911 aa13.85□□□□□ -0.19
PRPF40B-203ENST00000508736 DBNDD2Q9BQY9 259 aa13.85□□□□□ -0.19
PRPF40B-203ENST00000508736 IFIT5Q13325 482 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 SF3B2Q13435 895 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 ITPK1Q13572 414 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 TTLL11Q8NHH1 800 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 FSD1Q9BTV5 496 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 TBC1D2BQ9UPU7 963 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 AKAP2Q9Y2D5 859 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 BTAF1O14981 1849 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms