RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 SUPT16HQ9Y5B9 1047 aaKnown RBP18.88■□□□□ 0.61
CALCOCO2-211ENST00000508679 LRRC37AA6NMS7 1700 aa18.88■□□□□ 0.61
CALCOCO2-211ENST00000508679 MS4A1P11836 297 aa18.87■□□□□ 0.61
CALCOCO2-211ENST00000508679 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.87■□□□□ 0.61
CALCOCO2-211ENST00000508679 SNED1Q8TER0 1413 aa18.87■□□□□ 0.61
CALCOCO2-211ENST00000508679 SPEF2Q9C093 1822 aa18.86■□□□□ 0.61
CALCOCO2-211ENST00000508679 CTSWP56202 376 aa18.86■□□□□ 0.61
CALCOCO2-211ENST00000508679 STYK1Q6J9G0 422 aa18.86■□□□□ 0.61
CALCOCO2-211ENST00000508679 FTSJ3Q8IY81 847 aaKnown RBP18.86■□□□□ 0.61
CALCOCO2-211ENST00000508679 COG6Q9Y2V7 657 aa18.86■□□□□ 0.61
CALCOCO2-211ENST00000508679 A0A1B0GUL6 1792 aa18.86■□□□□ 0.61
CALCOCO2-211ENST00000508679 H0YIN7 160 aa18.85■□□□□ 0.61
CALCOCO2-211ENST00000508679 NPR1P16066 1061 aa18.85■□□□□ 0.61
CALCOCO2-211ENST00000508679 C7orf43Q8WVR3 580 aa18.85■□□□□ 0.61
CALCOCO2-211ENST00000508679 MASTLQ96GX5 879 aa18.85■□□□□ 0.61
CALCOCO2-211ENST00000508679 LTBP1Q14766 1721 aa18.85■□□□□ 0.61
CALCOCO2-211ENST00000508679 CRAMP1Q96RY5 1269 aa18.84■□□□□ 0.61
CALCOCO2-211ENST00000508679 BICC1Q9H694 974 aaKnown RBP18.84■□□□□ 0.61
CALCOCO2-211ENST00000508679 FER1L6Q2WGJ9 1857 aa18.84■□□□□ 0.61
CALCOCO2-211ENST00000508679 UTRNP46939 3433 aa18.83■□□□□ 0.61
CALCOCO2-211ENST00000508679 NPHP1O15259 732 aa18.83■□□□□ 0.61
CALCOCO2-211ENST00000508679 SLC51AQ86UW1 340 aa18.83■□□□□ 0.61
CALCOCO2-211ENST00000508679 ITPRIPQ8IWB1 547 aa18.83■□□□□ 0.61
CALCOCO2-211ENST00000508679 KLHL34Q8N239 644 aa18.83■□□□□ 0.61
CALCOCO2-211ENST00000508679 GREM2Q9H772 168 aa18.83■□□□□ 0.61
CALCOCO2-211ENST00000508679 SEC31BQ9NQW1 1179 aa18.83■□□□□ 0.61
CALCOCO2-211ENST00000508679 ZBTB40Q9NUA8 1239 aa18.83■□□□□ 0.61
CALCOCO2-211ENST00000508679 GNAI3P08754 354 aa18.82■□□□□ 0.6
CALCOCO2-211ENST00000508679 UBTFL1P0CB47 393 aaPredicted RBP18.82■□□□□ 0.6
CALCOCO2-211ENST00000508679 HSP90B1P14625 803 aaKnown RBP18.82■□□□□ 0.6
CALCOCO2-211ENST00000508679 LMBR1LQ6UX01 489 aa18.82■□□□□ 0.6
CALCOCO2-211ENST00000508679 RFX5P48382 616 aaPredicted RBP18.81■□□□□ 0.6
CALCOCO2-211ENST00000508679 MTX1Q13505 466 aa18.81■□□□□ 0.6
CALCOCO2-211ENST00000508679 CELF1Q92879 486 aaKnown RBP18.81■□□□□ 0.6
CALCOCO2-211ENST00000508679 PIM2Q9P1W9 311 aa18.81■□□□□ 0.6
CALCOCO2-211ENST00000508679 DDX19BQ9UMR2 479 aa18.81■□□□□ 0.6
CALCOCO2-211ENST00000508679 LRRFIP2Q9Y608 721 aaKnown RBP18.81■□□□□ 0.6
CALCOCO2-211ENST00000508679 FAM161AQ3B820 660 aa18.81■□□□□ 0.6
CALCOCO2-211ENST00000508679 YBX3P16989 372 aaKnown RBP eCLIP18.8■□□□□ 0.67e-12■□□□□ 11.1
CALCOCO2-211ENST00000508679 GRAPQ13588 217 aa18.8■□□□□ 0.6
CALCOCO2-211ENST00000508679 CCDC152Q4G0S7 254 aa18.8■□□□□ 0.6
CALCOCO2-211ENST00000508679 GRAPLQ8TC17 118 aaPredicted RBP18.8■□□□□ 0.6
CALCOCO2-211ENST00000508679 CNKSR1Q969H4 720 aa18.8■□□□□ 0.6
CALCOCO2-211ENST00000508679 RBM17Q96I25 401 aaKnown RBP18.8■□□□□ 0.6
CALCOCO2-211ENST00000508679 SBF1O95248 1867 aa18.79■□□□□ 0.6
CALCOCO2-211ENST00000508679 PRPF40BQ6NWY9 871 aaKnown RBP18.79■□□□□ 0.6
CALCOCO2-211ENST00000508679 TTLL6Q8N841 843 aa18.79■□□□□ 0.6
CALCOCO2-211ENST00000508679 RPGRQ92834 1020 aaKnown RBP18.79■□□□□ 0.6
CALCOCO2-211ENST00000508679 ZNF622Q969S3 477 aaKnown RBP eCLIP18.79■□□□□ 0.66e-8■■■□□ 14.6
CALCOCO2-211ENST00000508679 CCDC85AQ96PX6 553 aaPredicted RBP18.79■□□□□ 0.6
CALCOCO2-211ENST00000508679 CRBNQ96SW2 442 aa18.79■□□□□ 0.6
CALCOCO2-211ENST00000508679 GNAI2P04899 355 aa18.78■□□□□ 0.6
CALCOCO2-211ENST00000508679 ITGA6P23229 1130 aa18.78■□□□□ 0.6
CALCOCO2-211ENST00000508679 ALDH1B1P30837 517 aa18.78■□□□□ 0.6
CALCOCO2-211ENST00000508679 DUOX1Q9NRD9 1551 aa18.77■□□□□ 0.6
CALCOCO2-211ENST00000508679 DDX46Q7L014 1031 aaKnown RBP18.77■□□□□ 0.6
CALCOCO2-211ENST00000508679 C1orf115Q9H7X2 142 aa18.77■□□□□ 0.6
CALCOCO2-211ENST00000508679 CCDC88AQ3V6T2 1871 aa18.77■□□□□ 0.59
CALCOCO2-211ENST00000508679 BBOX1O75936 387 aa18.76■□□□□ 0.59
CALCOCO2-211ENST00000508679 RPS8P62241 208 aaKnown RBP18.76■□□□□ 0.59
CALCOCO2-211ENST00000508679 DALRD3Q5D0E6 543 aaKnown RBP18.76■□□□□ 0.59
CALCOCO2-211ENST00000508679 OLFM4Q6UX06 510 aa18.76■□□□□ 0.59
CALCOCO2-211ENST00000508679 SIRT2Q8IXJ6 389 aa18.76■□□□□ 0.59
CALCOCO2-211ENST00000508679 WWC3Q9ULE0 1092 aa18.76■□□□□ 0.59
CALCOCO2-211ENST00000508679 PNMA6EA0A0J9YXQ4 647 aa18.75■□□□□ 0.59
CALCOCO2-211ENST00000508679 ATP8B2P98198 1209 aa18.75■□□□□ 0.59
CALCOCO2-211ENST00000508679 PTPN12Q05209 780 aaKnown RBP18.75■□□□□ 0.59
CALCOCO2-211ENST00000508679 POLA2Q14181 598 aa18.75■□□□□ 0.59
CALCOCO2-211ENST00000508679 ATP6V0A2Q9Y487 856 aa18.75■□□□□ 0.59
CALCOCO2-211ENST00000508679 CEP85Q6P2H3 762 aa18.74■□□□□ 0.59
CALCOCO2-211ENST00000508679 SP8Q8IXZ3 490 aa18.74■□□□□ 0.59
CALCOCO2-211ENST00000508679 SSH3Q8TE77 659 aa18.74■□□□□ 0.59
CALCOCO2-211ENST00000508679 ZNF594Q96JF6 807 aaPredicted RBP18.74■□□□□ 0.59
CALCOCO2-211ENST00000508679 HDAC5Q9UQL6 1122 aa18.74■□□□□ 0.59
CALCOCO2-211ENST00000508679 DICER1Q9UPY3 1922 aaKnown RBP18.73■□□□□ 0.59
CALCOCO2-211ENST00000508679 PPEF1O14829 653 aaPredicted RBP18.73■□□□□ 0.59
CALCOCO2-211ENST00000508679 BCS1LQ9Y276 419 aa18.73■□□□□ 0.59
CALCOCO2-211ENST00000508679 ANKRD18BA2A2Z9 1011 aa18.72■□□□□ 0.59
CALCOCO2-211ENST00000508679 C21orf2O43822 256 aa18.72■□□□□ 0.59
CALCOCO2-211ENST00000508679 IFIT5Q13325 482 aaKnown RBP18.72■□□□□ 0.59
CALCOCO2-211ENST00000508679 KLHDC4Q8TBB5 520 aa18.72■□□□□ 0.59
CALCOCO2-211ENST00000508679 COPRSQ9NQ92 184 aa18.72■□□□□ 0.59
CALCOCO2-211ENST00000508679 BSDC1Q9NW68 430 aaPredicted RBP18.72■□□□□ 0.59
CALCOCO2-211ENST00000508679 PRELPP51888 382 aa18.71■□□□□ 0.59
CALCOCO2-211ENST00000508679 TMC4Q7Z404 712 aa18.71■□□□□ 0.59
CALCOCO2-211ENST00000508679 EXOC6Q8TAG9 804 aa18.71■□□□□ 0.59
CALCOCO2-211ENST00000508679 CDC5LQ99459 802 aaKnown RBP18.71■□□□□ 0.59
CALCOCO2-211ENST00000508679 PUS3Q9BZE2 481 aaKnown RBP18.71■□□□□ 0.59
CALCOCO2-211ENST00000508679 RIPOR2Q9Y4F9 1068 aa18.71■□□□□ 0.59
CALCOCO2-211ENST00000508679 PCDHB15Q9Y5E8 787 aa18.71■□□□□ 0.59
CALCOCO2-211ENST00000508679 NFKBIEO00221 500 aa18.7■□□□□ 0.58
CALCOCO2-211ENST00000508679 CCDC57Q2TAC2 916 aa18.7■□□□□ 0.58
CALCOCO2-211ENST00000508679 ATG9AQ7Z3C6 839 aa18.7■□□□□ 0.58
CALCOCO2-211ENST00000508679 ANKRD18AQ8IVF6 992 aa18.7■□□□□ 0.58
CALCOCO2-211ENST00000508679 MINPP1Q9UNW1 487 aa18.7■□□□□ 0.58
CALCOCO2-211ENST00000508679 SRGAP3O43295 1099 aa18.69■□□□□ 0.58
CALCOCO2-211ENST00000508679 CENPBP07199 599 aaPredicted RBP18.69■□□□□ 0.58
CALCOCO2-211ENST00000508679 RPAP2Q8IXW5 612 aaPredicted RBP18.69■□□□□ 0.58
CALCOCO2-211ENST00000508679 CHMP4BQ9H444 224 aaKnown RBP18.69■□□□□ 0.58
CALCOCO2-211ENST00000508679 CHMP3Q9Y3E7 222 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms