RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 SKILP12757 684 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 LIG1P18858 919 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 C1orf141Q5JVX7 400 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 TEX35Q5T0J7 233 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 BEND3Q5T5X7 828 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 DNAJC25Q9H1X3 360 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 TLR7Q9NYK1 1049 aaKnown RBP14.94□□□□□ -0.02
DDR1-262ENST00000508312 GJB2P29033 226 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 ZNF165P49910 485 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 AK2P54819 239 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 NECAB1Q8N987 351 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 ZNF446Q9NWS9 450 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 DACT1Q9NYF0 836 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 RGPD1P0DJD0 1748 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 PXDNQ92626 1479 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 TOPAZ1Q8N9V7 1692 aa14.94□□□□□ -0.02
DDR1-262ENST00000508312 GOLGA6L19H0YKK7 550 aa14.93□□□□□ -0.02
DDR1-262ENST00000508312 LARGE1O95461 756 aa14.93□□□□□ -0.02
DDR1-262ENST00000508312 CASTP20810 708 aaKnown RBP14.93□□□□□ -0.02
DDR1-262ENST00000508312 PI4K2BQ8TCG2 481 aa14.93□□□□□ -0.02
DDR1-262ENST00000508312 RAD50Q92878 1312 aa14.93□□□□□ -0.02
DDR1-262ENST00000508312 PRPF40BQ6NWY9 871 aaKnown RBP14.92□□□□□ -0.02
DDR1-262ENST00000508312 KRBA2Q6ZNG9 492 aa14.92□□□□□ -0.02
DDR1-262ENST00000508312 SSH3Q8TE77 659 aa14.92□□□□□ -0.02
DDR1-262ENST00000508312 OSBPL3Q9H4L5 887 aa14.92□□□□□ -0.02
DDR1-262ENST00000508312 NWD1Q149M9 1564 aa14.92□□□□□ -0.02
DDR1-262ENST00000508312 PTH1RQ03431 593 aa14.92□□□□□ -0.02
DDR1-262ENST00000508312 CCDC171Q6TFL3 1326 aa14.92□□□□□ -0.02
DDR1-262ENST00000508312 ADCY9O60503 1353 aa14.92□□□□□ -0.02
DDR1-262ENST00000508312 FOSBP53539 338 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 ADCK5Q3MIX3 580 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 RASSF4Q9H2L5 321 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 TFIP11Q9UBB9 837 aaKnown RBP14.91□□□□□ -0.02
DDR1-262ENST00000508312 LIMCH1Q9UPQ0 1083 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 CSB-PGBD3P0DP91 1061 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 AACSQ86V21 672 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 BICD2Q8TD16 824 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 FBXW7Q969H0 707 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 ATP5J2-PTCD1G3V325 749 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 RNMTO43148 476 aaKnown RBP14.91□□□□□ -0.02
DDR1-262ENST00000508312 PTCD1O75127 700 aaKnown RBP14.91□□□□□ -0.02
DDR1-262ENST00000508312 STK3Q13188 491 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 SYT10Q6XYQ8 523 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 NFATC2IPQ8NCF5 419 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 FAM227BQ96M60 508 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 USP16Q9Y5T5 823 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 TAF6LQ9Y6J9 622 aa14.91□□□□□ -0.02
DDR1-262ENST00000508312 KRT85P78386 507 aa14.9□□□□□ -0.02
DDR1-262ENST00000508312 TTC6Q86TZ1 520 aa14.9□□□□□ -0.02
DDR1-262ENST00000508312 LRRC8AQ8IWT6 810 aa14.9□□□□□ -0.02
DDR1-262ENST00000508312 JAKMIP1Q96N16 626 aaKnown RBP14.9□□□□□ -0.02
DDR1-262ENST00000508312 BOLA2Q9H3K6 86 aa14.9□□□□□ -0.02
DDR1-262ENST00000508312 TRIM66O15016 1216 aa14.9□□□□□ -0.02
DDR1-262ENST00000508312 SLFNL1Q499Z3 407 aa14.9□□□□□ -0.02
DDR1-262ENST00000508312 ARHGAP29Q52LW3 1261 aa14.9□□□□□ -0.02
DDR1-262ENST00000508312 KIF1BPQ96EK5 621 aa14.9□□□□□ -0.02
DDR1-262ENST00000508312 SUCLG2Q96I99 432 aa14.9□□□□□ -0.02
DDR1-262ENST00000508312 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.9□□□□□ -0.02
DDR1-262ENST00000508312 SNX14Q9Y5W7 946 aa14.9□□□□□ -0.02
DDR1-262ENST00000508312 CLCN6P51797 869 aa14.89□□□□□ -0.03
DDR1-262ENST00000508312 RUFY3Q7L099 469 aa14.89□□□□□ -0.03
DDR1-262ENST00000508312 PROSER2Q86WR7 435 aaPredicted RBP14.89□□□□□ -0.03
DDR1-262ENST00000508312 BICC1Q9H694 974 aaKnown RBP14.89□□□□□ -0.03
DDR1-262ENST00000508312 MTMR6Q9Y217 621 aa14.89□□□□□ -0.03
DDR1-262ENST00000508312 NALCNQ8IZF0 1738 aa14.89□□□□□ -0.03
DDR1-262ENST00000508312 GIGYF1O75420 1035 aaPredicted RBP14.89□□□□□ -0.03
DDR1-262ENST00000508312 PLEKHO1Q53GL0 409 aaPredicted RBP14.89□□□□□ -0.03
DDR1-262ENST00000508312 PLA2G4DQ86XP0 818 aa14.89□□□□□ -0.03
DDR1-262ENST00000508312 CCDC191Q8NCU4 936 aa14.89□□□□□ -0.03
DDR1-262ENST00000508312 CCDC69A6NI79 296 aa14.89□□□□□ -0.03
DDR1-262ENST00000508312 RGS22Q8NE09 1264 aa14.89□□□□□ -0.03
DDR1-262ENST00000508312 ZNF330Q9Y3S2 320 aaPredicted RBP14.89□□□□□ -0.03
DDR1-262ENST00000508312 FMN2Q9NZ56 1722 aa14.88□□□□□ -0.03
DDR1-262ENST00000508312 BECN2A8MW95 431 aa14.88□□□□□ -0.03
DDR1-262ENST00000508312 PNMA6AP0CW24 399 aaPredicted RBP14.88□□□□□ -0.03
DDR1-262ENST00000508312 IFIT2P09913 472 aaKnown RBP14.88□□□□□ -0.03
DDR1-262ENST00000508312 GYS2P54840 703 aa14.88□□□□□ -0.03
DDR1-262ENST00000508312 LARP1BQ659C4 914 aaKnown RBP14.88□□□□□ -0.03
DDR1-262ENST00000508312 TMCO3Q6UWJ1 677 aa14.88□□□□□ -0.03
DDR1-262ENST00000508312 KRT28Q7Z3Y7 464 aa14.88□□□□□ -0.03
DDR1-262ENST00000508312 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.88□□□□□ -0.03
DDR1-262ENST00000508312 LRRN4CLQ8ND94 238 aa14.88□□□□□ -0.03
DDR1-262ENST00000508312 ZCCHC17Q9NP64 241 aaKnown RBP14.88□□□□□ -0.03
DDR1-262ENST00000508312 HSPA4P34932 840 aa14.87□□□□□ -0.03
DDR1-262ENST00000508312 AKAP4Q5JQC9 854 aa14.87□□□□□ -0.03
DDR1-262ENST00000508312 EPHA10Q5JZY3 1008 aa14.87□□□□□ -0.03
DDR1-262ENST00000508312 RIC3Q7Z5B4 369 aa14.87□□□□□ -0.03
DDR1-262ENST00000508312 CREBRFQ8IUR6 639 aa14.87□□□□□ -0.03
DDR1-262ENST00000508312 FHOD1Q9Y613 1164 aa14.87□□□□□ -0.03
DDR1-262ENST00000508312 ARHGAP23Q9P227 1491 aa14.87□□□□□ -0.03
DDR1-262ENST00000508312 GTF2A1P52655 376 aaPredicted RBP14.87□□□□□ -0.03
DDR1-262ENST00000508312 TPM4P67936 248 aa14.87□□□□□ -0.03
DDR1-262ENST00000508312 ST5P78524 1137 aa14.87□□□□□ -0.03
DDR1-262ENST00000508312 SNW1Q13573 536 aaKnown RBP14.86□□□□□ -0.03
DDR1-262ENST00000508312 POLA2Q14181 598 aa14.86□□□□□ -0.03
DDR1-262ENST00000508312 ARHGEF25Q86VW2 580 aa14.86□□□□□ -0.03
DDR1-262ENST00000508312 HOMER1Q86YM7 354 aa14.86□□□□□ -0.03
DDR1-262ENST00000508312 CNTROBQ8N137 903 aa14.86□□□□□ -0.03
DDR1-262ENST00000508312 TXLNBQ8N3L3 684 aa14.86□□□□□ -0.03
DDR1-262ENST00000508312 KAZALD1Q96I82 304 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms