RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 NEURL1BA8MQ27 555 aa25.34■■□□□ 1.65
SFXN1-209ENST00000508290 TOMM70O94826 608 aa25.34■■□□□ 1.65
SFXN1-209ENST00000508290 CCDC152Q4G0S7 254 aa25.34■■□□□ 1.65
SFXN1-209ENST00000508290 OLFM4Q6UX06 510 aa25.34■■□□□ 1.65
SFXN1-209ENST00000508290 NMRK2Q9NPI5 230 aa25.34■■□□□ 1.65
SFXN1-209ENST00000508290 CT47B1P0C2W7 299 aaPredicted RBP25.33■■□□□ 1.65
SFXN1-209ENST00000508290 RTL5Q5HYW3 569 aaPredicted RBP25.33■■□□□ 1.65
SFXN1-209ENST00000508290 C16orf71Q8IYS4 520 aaPredicted RBP25.33■■□□□ 1.65
SFXN1-209ENST00000508290 JDP2Q8WYK2 163 aa25.33■■□□□ 1.65
SFXN1-209ENST00000508290 ZNF277Q9NRM2 450 aaPredicted RBP25.33■■□□□ 1.65
SFXN1-209ENST00000508290 VEGFAP15692 232 aaPredicted RBP25.31■■□□□ 1.64
SFXN1-209ENST00000508290 RTFDC1Q9BY42 306 aaPredicted RBP25.31■■□□□ 1.64
SFXN1-209ENST00000508290 GCKRQ14397 625 aa25.3■■□□□ 1.64
SFXN1-209ENST00000508290 DPP8Q6V1X1 898 aaPredicted RBP25.3■■□□□ 1.64
SFXN1-209ENST00000508290 MIER1Q8N108 512 aa25.3■■□□□ 1.64
SFXN1-209ENST00000508290 MPNDQ8N594 471 aa25.3■■□□□ 1.64
SFXN1-209ENST00000508290 CWF19L2Q2TBE0 894 aaKnown RBP25.29■■□□□ 1.64
SFXN1-209ENST00000508290 TRMT2AQ8IZ69 625 aaKnown RBP25.29■■□□□ 1.64
SFXN1-209ENST00000508290 CCDC88AQ3V6T2 1871 aa25.29■■□□□ 1.64
SFXN1-209ENST00000508290 H7C1W4 665 aa25.28■■□□□ 1.64
SFXN1-209ENST00000508290 RPS8P62241 208 aaKnown RBP25.28■■□□□ 1.64
SFXN1-209ENST00000508290 RBM46Q8TBY0 533 aaKnown RBP25.28■■□□□ 1.64
SFXN1-209ENST00000508290 RRAGCQ9HB90 399 aa25.28■■□□□ 1.64
SFXN1-209ENST00000508290 FZD9O00144 591 aa25.27■■□□□ 1.64
SFXN1-209ENST00000508290 CTSWP56202 376 aa25.27■■□□□ 1.64
SFXN1-209ENST00000508290 ALDH1L2Q3SY69 923 aa25.27■■□□□ 1.64
SFXN1-209ENST00000508290 LARGE2Q8N3Y3 721 aa25.27■■□□□ 1.64
SFXN1-209ENST00000508290 PTPRCP08575 1304 aa25.27■■□□□ 1.64
SFXN1-209ENST00000508290 RTL9Q8NET4 1388 aa25.27■■□□□ 1.64
SFXN1-209ENST00000508290 WDR90Q96KV7 1748 aa25.26■■□□□ 1.63
SFXN1-209ENST00000508290 IQCA1LA6NCM1 817 aa25.26■■□□□ 1.63
SFXN1-209ENST00000508290 CELF1Q92879 486 aaKnown RBP25.26■■□□□ 1.63
SFXN1-209ENST00000508290 PLA2G12BQ9BX93 195 aa25.26■■□□□ 1.63
SFXN1-209ENST00000508290 LRRC37AA6NMS7 1700 aa25.26■■□□□ 1.63
SFXN1-209ENST00000508290 EIF6P56537 245 aaKnown RBP25.25■■□□□ 1.63
SFXN1-209ENST00000508290 FSTL1Q12841 308 aa25.25■■□□□ 1.63
SFXN1-209ENST00000508290 UBE3BQ7Z3V4 1068 aa25.25■■□□□ 1.63
SFXN1-209ENST00000508290 L3MBTL3Q96JM7 780 aaPredicted RBP25.25■■□□□ 1.63
SFXN1-209ENST00000508290 CDC5LQ99459 802 aaKnown RBP25.25■■□□□ 1.63
SFXN1-209ENST00000508290 PPIP5K2O43314 1243 aa25.24■■□□□ 1.63
SFXN1-209ENST00000508290 BEND3Q5T5X7 828 aa25.24■■□□□ 1.63
SFXN1-209ENST00000508290 NIM1KQ8IY84 436 aa25.24■■□□□ 1.63
SFXN1-209ENST00000508290 ALDH1L1O75891 902 aa25.23■■□□□ 1.63
SFXN1-209ENST00000508290 GPC2Q8N158 579 aa25.23■■□□□ 1.63
SFXN1-209ENST00000508290 CDCA7LQ96GN5 454 aa25.23■■□□□ 1.63
SFXN1-209ENST00000508290 DDNO94850 711 aaPredicted RBP25.22■■□□□ 1.63
SFXN1-209ENST00000508290 KIAA2012Q0VF49 1180 aa25.22■■□□□ 1.63
SFXN1-209ENST00000508290 ANKRD18AQ8IVF6 992 aa25.22■■□□□ 1.63
SFXN1-209ENST00000508290 MRPL50Q8N5N7 158 aaKnown RBP25.22■■□□□ 1.63
SFXN1-209ENST00000508290 TTLL11Q8NHH1 800 aa25.22■■□□□ 1.63
SFXN1-209ENST00000508290 F6X3S4 739 aa25.21■■□□□ 1.63
SFXN1-209ENST00000508290 SMC1BQ8NDV3 1235 aa25.21■■□□□ 1.63
SFXN1-209ENST00000508290 NSFL1CQ9UNZ2 370 aaKnown RBP25.21■■□□□ 1.63
SFXN1-209ENST00000508290 CASP7P55210 303 aa25.2■■□□□ 1.62
SFXN1-209ENST00000508290 SSH1Q8WYL5 1049 aa25.2■■□□□ 1.62
SFXN1-209ENST00000508290 JARID2Q92833 1246 aaPredicted RBP25.2■■□□□ 1.62
SFXN1-209ENST00000508290 EYA3Q99504 573 aa25.2■■□□□ 1.62
SFXN1-209ENST00000508290 SRCIN1Q9C0H9 1055 aa25.2■■□□□ 1.62
SFXN1-209ENST00000508290 SEC31BQ9NQW1 1179 aa25.2■■□□□ 1.62
SFXN1-209ENST00000508290 PODXL2Q9NZ53 605 aa25.2■■□□□ 1.62
SFXN1-209ENST00000508290 ZNF541Q9H0D2 1346 aa25.19■■□□□ 1.62
SFXN1-209ENST00000508290 HSPA6P17066 643 aa25.19■■□□□ 1.62
SFXN1-209ENST00000508290 AOC3Q16853 763 aa25.19■■□□□ 1.62
SFXN1-209ENST00000508290 ZNRF3Q9ULT6 936 aa25.19■■□□□ 1.62
SFXN1-209ENST00000508290 GRM8O00222 908 aa25.18■■□□□ 1.62
SFXN1-209ENST00000508290 POTECB2RU33 542 aa25.17■■□□□ 1.62
SFXN1-209ENST00000508290 CSF1RP07333 972 aa25.17■■□□□ 1.62
SFXN1-209ENST00000508290 SLC4A10Q6U841 1118 aa25.17■■□□□ 1.62
SFXN1-209ENST00000508290 SMC4Q9NTJ3 1288 aa25.17■■□□□ 1.62
SFXN1-209ENST00000508290 BSDC1Q9NW68 430 aaPredicted RBP25.17■■□□□ 1.62
SFXN1-209ENST00000508290 C9orf78Q9NZ63 289 aaPredicted RBP25.17■■□□□ 1.62
SFXN1-209ENST00000508290 BRPF1P55201 1214 aaPredicted RBP25.16■■□□□ 1.62
SFXN1-209ENST00000508290 WASHC4Q2M389 1173 aa25.16■■□□□ 1.62
SFXN1-209ENST00000508290 GREM2Q9H772 168 aa25.16■■□□□ 1.62
SFXN1-209ENST00000508290 DUOX1Q9NRD9 1551 aa25.16■■□□□ 1.62
SFXN1-209ENST00000508290 C6orf229H3BNL8 230 aa25.15■■□□□ 1.62
SFXN1-209ENST00000508290 IGHMBP2P38935 993 aaKnown RBP25.15■■□□□ 1.62
SFXN1-209ENST00000508290 GPSM2P81274 684 aa25.15■■□□□ 1.62
SFXN1-209ENST00000508290 SLC51AQ86UW1 340 aa25.15■■□□□ 1.62
SFXN1-209ENST00000508290 CCDC85AQ96PX6 553 aaPredicted RBP25.15■■□□□ 1.62
SFXN1-209ENST00000508290 ANKIB1Q9P2G1 1089 aa25.15■■□□□ 1.62
SFXN1-209ENST00000508290 HACL1Q9UJ83 578 aa25.15■■□□□ 1.62
SFXN1-209ENST00000508290 XDHP47989 1333 aa25.14■■□□□ 1.62
SFXN1-209ENST00000508290 SCN4AP35499 1836 aa25.14■■□□□ 1.62
SFXN1-209ENST00000508290 MYH3P11055 1940 aa25.14■■□□□ 1.62
SFXN1-209ENST00000508290 COL4A5P29400 1685 aa25.14■■□□□ 1.62
SFXN1-209ENST00000508290 HNRNPUQ00839 825 aaKnown RBP eCLIP25.14■■□□□ 1.62
SFXN1-209ENST00000508290 PNMA8AQ86V59 439 aaPredicted RBP25.14■■□□□ 1.62
SFXN1-209ENST00000508290 GGA1Q9UJY5 639 aa25.14■■□□□ 1.62
SFXN1-209ENST00000508290 LMOD1P29536 600 aaPredicted RBP25.13■■□□□ 1.61
SFXN1-209ENST00000508290 TNIP1Q15025 636 aa25.13■■□□□ 1.61
SFXN1-209ENST00000508290 TBC1D16Q8TBP0 767 aa25.13■■□□□ 1.61
SFXN1-209ENST00000508290 LTBP1Q14766 1721 aa25.12■■□□□ 1.61
SFXN1-209ENST00000508290 ITGA6P23229 1130 aa25.12■■□□□ 1.61
SFXN1-209ENST00000508290 APLP1P51693 650 aa25.12■■□□□ 1.61
SFXN1-209ENST00000508290 ZC3H12CQ9C0D7 883 aaKnown RBP25.12■■□□□ 1.61
SFXN1-209ENST00000508290 TAF1DQ9H5J8 278 aaPredicted RBP25.12■■□□□ 1.61
SFXN1-209ENST00000508290 POLLQ9UGP5 575 aa25.12■■□□□ 1.61
SFXN1-209ENST00000508290 TAF1P21675 1872 aa25.12■■□□□ 1.61
SFXN1-209ENST00000508290 UTYO14607 1347 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms