RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 SP8Q8IXZ3 490 aa14.32□□□□□ -0.12
PTPN13-207ENST00000508063 NIM1KQ8IY84 436 aa14.32□□□□□ -0.12
PTPN13-207ENST00000508063 GRAPLQ8TC17 118 aaPredicted RBP14.32□□□□□ -0.12
PTPN13-207ENST00000508063 LAMB2P55268 1798 aa14.32□□□□□ -0.12
PTPN13-207ENST00000508063 ZNF316A6NFI3 1004 aaPredicted RBP14.31□□□□□ -0.12
PTPN13-207ENST00000508063 ELL2O00472 640 aaPredicted RBP14.31□□□□□ -0.12
PTPN13-207ENST00000508063 PPIP5K2O43314 1243 aa14.31□□□□□ -0.12
PTPN13-207ENST00000508063 ANP32CO43423 234 aa14.31□□□□□ -0.12
PTPN13-207ENST00000508063 LMOD1P29536 600 aaPredicted RBP14.31□□□□□ -0.12
PTPN13-207ENST00000508063 EPHX2P34913 555 aa14.31□□□□□ -0.12
PTPN13-207ENST00000508063 CCDC27Q2M243 656 aa14.31□□□□□ -0.12
PTPN13-207ENST00000508063 EAPPQ56P03 285 aaPredicted RBP14.31□□□□□ -0.12
PTPN13-207ENST00000508063 CCDC30Q5VVM6 783 aa14.31□□□□□ -0.12
PTPN13-207ENST00000508063 DPP8Q6V1X1 898 aaPredicted RBP14.31□□□□□ -0.12
PTPN13-207ENST00000508063 JMYQ8N9B5 988 aa14.31□□□□□ -0.12
PTPN13-207ENST00000508063 CLEC11AQ9Y240 323 aa14.31□□□□□ -0.12
PTPN13-207ENST00000508063 GJA3Q9Y6H8 435 aa14.31□□□□□ -0.12
PTPN13-207ENST00000508063 ATP5J2-PTCD1G3V325 749 aa14.3□□□□□ -0.12
PTPN13-207ENST00000508063 DDX58O95786 925 aaKnown RBP14.3□□□□□ -0.12
PTPN13-207ENST00000508063 MPNDQ8N594 471 aa14.3□□□□□ -0.12
PTPN13-207ENST00000508063 FAM89AQ96GI7 184 aa14.3□□□□□ -0.12
PTPN13-207ENST00000508063 RTFDC1Q9BY42 306 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-207ENST00000508063 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
PTPN13-207ENST00000508063 POTEJP0CG39 1038 aa14.29□□□□□ -0.12
PTPN13-207ENST00000508063 SF3B3Q15393 1217 aaKnown RBP14.29□□□□□ -0.12
PTPN13-207ENST00000508063 C8orf58Q8NAV2 365 aa14.29□□□□□ -0.12
PTPN13-207ENST00000508063 CREBZFQ9NS37 354 aa14.29□□□□□ -0.12
PTPN13-207ENST00000508063 IRS4O14654 1257 aaPredicted RBP14.28□□□□□ -0.12
PTPN13-207ENST00000508063 AOC3Q16853 763 aa14.28□□□□□ -0.12
PTPN13-207ENST00000508063 CCDC184Q52MB2 194 aa14.28□□□□□ -0.12
PTPN13-207ENST00000508063 DDX60Q8IY21 1712 aaKnown RBP14.28□□□□□ -0.12
PTPN13-207ENST00000508063 ZBTB38Q8NAP3 1195 aaPredicted RBP14.28□□□□□ -0.12
PTPN13-207ENST00000508063 PHAXQ9H814 394 aaKnown RBP14.28□□□□□ -0.12
PTPN13-207ENST00000508063 MRS2Q9HD23 443 aa14.28□□□□□ -0.12
PTPN13-207ENST00000508063 ZNRF3Q9ULT6 936 aa14.28□□□□□ -0.12
PTPN13-207ENST00000508063 WWC1Q8IX03 1113 aa14.27□□□□□ -0.13
PTPN13-207ENST00000508063 CCDC191Q8NCU4 936 aa14.27□□□□□ -0.13
PTPN13-207ENST00000508063 STK31Q9BXU1 1019 aa14.27□□□□□ -0.13
PTPN13-207ENST00000508063 COL4A5P29400 1685 aa14.26□□□□□ -0.13
PTPN13-207ENST00000508063 IL16Q14005 1332 aa14.26□□□□□ -0.13
PTPN13-207ENST00000508063 PASKQ96RG2 1323 aa14.26□□□□□ -0.13
PTPN13-207ENST00000508063 KIAA2012Q0VF49 1180 aa14.26□□□□□ -0.13
PTPN13-207ENST00000508063 MKRN4PQ13434 485 aaPredicted RBP14.26□□□□□ -0.13
PTPN13-207ENST00000508063 RTL5Q5HYW3 569 aaPredicted RBP14.26□□□□□ -0.13
PTPN13-207ENST00000508063 IFFO2Q5TF58 517 aa14.26□□□□□ -0.13
PTPN13-207ENST00000508063 ZNF428Q96B54 188 aa14.26□□□□□ -0.13
PTPN13-207ENST00000508063 MYD88Q99836 296 aa14.26□□□□□ -0.13
PTPN13-207ENST00000508063 ADAMTSL1Q8N6G6 1762 aa14.25□□□□□ -0.13
PTPN13-207ENST00000508063 TNIP1Q15025 636 aa14.25□□□□□ -0.13
PTPN13-207ENST00000508063 USP50Q70EL3 339 aaPredicted RBP14.25□□□□□ -0.13
PTPN13-207ENST00000508063 CNTROBQ8N137 903 aa14.25□□□□□ -0.13
PTPN13-207ENST00000508063 METTL22Q9BUU2 404 aaPredicted RBP14.25□□□□□ -0.13
PTPN13-207ENST00000508063 CWC25Q9NXE8 425 aaPredicted RBP14.25□□□□□ -0.13
PTPN13-207ENST00000508063 TMEM88BA6NKF7 163 aa14.24□□□□□ -0.13
PTPN13-207ENST00000508063 ITGBL1O95965 494 aaPredicted RBP14.24□□□□□ -0.13
PTPN13-207ENST00000508063 PCCAP05165 728 aaPredicted RBP14.24□□□□□ -0.13
PTPN13-207ENST00000508063 SCNN1DP51172 638 aa14.24□□□□□ -0.13
PTPN13-207ENST00000508063 NEXNQ0ZGT2 675 aa14.24□□□□□ -0.13
PTPN13-207ENST00000508063 TWISTNBQ3B726 338 aaPredicted RBP14.24□□□□□ -0.13
PTPN13-207ENST00000508063 SLC51AQ86UW1 340 aa14.24□□□□□ -0.13
PTPN13-207ENST00000508063 TSPYL6Q8N831 410 aa14.24□□□□□ -0.13
PTPN13-207ENST00000508063 TSR2Q969E8 191 aaKnown RBP14.24□□□□□ -0.13
PTPN13-207ENST00000508063 LRRC37AA6NMS7 1700 aa14.24□□□□□ -0.13
PTPN13-207ENST00000508063 TAF1P21675 1872 aa14.23□□□□□ -0.13
PTPN13-207ENST00000508063 CDHR2Q9BYE9 1310 aa14.23□□□□□ -0.13
PTPN13-207ENST00000508063 PDE8AO60658 829 aa14.23□□□□□ -0.13
PTPN13-207ENST00000508063 RPS8P62241 208 aaKnown RBP14.23□□□□□ -0.13
PTPN13-207ENST00000508063 CXCL9Q07325 125 aa14.23□□□□□ -0.13
PTPN13-207ENST00000508063 WASHC4Q2M389 1173 aa14.23□□□□□ -0.13
PTPN13-207ENST00000508063 CCDC152Q4G0S7 254 aa14.23□□□□□ -0.13
PTPN13-207ENST00000508063 CIAPIN1Q6FI81 312 aa14.23□□□□□ -0.13
PTPN13-207ENST00000508063 KSR2Q6VAB6 950 aa14.23□□□□□ -0.13
PTPN13-207ENST00000508063 CELF1Q92879 486 aaKnown RBP14.23□□□□□ -0.13
PTPN13-207ENST00000508063 EYA3Q99504 573 aa14.23□□□□□ -0.13
PTPN13-207ENST00000508063 ADARB2Q9NS39 739 aaKnown RBP14.23□□□□□ -0.13
PTPN13-207ENST00000508063 GPRC5DQ9NZD1 345 aa14.23□□□□□ -0.13
PTPN13-207ENST00000508063 NSFL1CQ9UNZ2 370 aaKnown RBP14.23□□□□□ -0.13
PTPN13-207ENST00000508063 MAP3K2Q9Y2U5 619 aa14.23□□□□□ -0.13
PTPN13-207ENST00000508063 C6orf229H3BNL8 230 aa14.22□□□□□ -0.13
PTPN13-207ENST00000508063 EPS15P42566 896 aa14.22□□□□□ -0.13
PTPN13-207ENST00000508063 MAP1SQ66K74 1059 aaPredicted RBP14.22□□□□□ -0.13
PTPN13-207ENST00000508063 WDR63Q8IWG1 891 aa14.22□□□□□ -0.13
PTPN13-207ENST00000508063 BCL2L13Q9BXK5 485 aa14.22□□□□□ -0.13
PTPN13-207ENST00000508063 MKRN1Q9UHC7 482 aaKnown RBP14.22□□□□□ -0.13
PTPN13-207ENST00000508063 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.13
PTPN13-207ENST00000508063 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.13
PTPN13-207ENST00000508063 LTBP1Q14766 1721 aa14.21□□□□□ -0.14
PTPN13-207ENST00000508063 CNTNAP1P78357 1384 aa14.21□□□□□ -0.14
PTPN13-207ENST00000508063 RAD17O75943 681 aa14.2□□□□□ -0.14
PTPN13-207ENST00000508063 GMPSP49915 693 aaPredicted RBP14.2□□□□□ -0.14
PTPN13-207ENST00000508063 GPSM2P81274 684 aa14.2□□□□□ -0.14
PTPN13-207ENST00000508063 ZC3H12CQ9C0D7 883 aaKnown RBP14.2□□□□□ -0.14
PTPN13-207ENST00000508063 DUOX1Q9NRD9 1551 aa14.2□□□□□ -0.14
PTPN13-207ENST00000508063 G3V3G9 751 aa14.19□□□□□ -0.14
PTPN13-207ENST00000508063 HSPA1AP0DMV8 641 aaKnown RBP14.19□□□□□ -0.14
PTPN13-207ENST00000508063 HSPA1BP0DMV9 641 aaKnown RBP14.19□□□□□ -0.14
PTPN13-207ENST00000508063 DCAF8Q5TAQ9 597 aa14.19□□□□□ -0.14
PTPN13-207ENST00000508063 ANKRD18AQ8IVF6 992 aa14.19□□□□□ -0.14
PTPN13-207ENST00000508063 PODXL2Q9NZ53 605 aa14.19□□□□□ -0.14
PTPN13-207ENST00000508063 FANCIQ9NVI1 1328 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms