RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 TTLL11Q8NHH1 800 aa21.66■■□□□ 1.06
RNF4-209ENST00000507784 DDR1Q08345 913 aa21.65■■□□□ 1.06
RNF4-209ENST00000507784 G3BP1Q13283 466 aaKnown RBP eCLIP21.65■■□□□ 1.06
RNF4-209ENST00000507784 TAF7LQ5H9L4 462 aa21.65■■□□□ 1.06
RNF4-209ENST00000507784 KLHDC4Q8TBB5 520 aa21.65■■□□□ 1.06
RNF4-209ENST00000507784 SIL1Q9H173 461 aa21.65■■□□□ 1.06
RNF4-209ENST00000507784 PARP3Q9Y6F1 533 aa21.65■■□□□ 1.06
RNF4-209ENST00000507784 POLRMTO00411 1230 aaKnown RBP21.64■■□□□ 1.05
RNF4-209ENST00000507784 RFX5P48382 616 aaPredicted RBP21.64■■□□□ 1.05
RNF4-209ENST00000507784 ST5P78524 1137 aa21.64■■□□□ 1.05
RNF4-209ENST00000507784 IFIT5Q13325 482 aaKnown RBP21.64■■□□□ 1.05
RNF4-209ENST00000507784 FAM161AQ3B820 660 aa21.64■■□□□ 1.05
RNF4-209ENST00000507784 HSP90AB4PQ58FF6 505 aa21.64■■□□□ 1.05
RNF4-209ENST00000507784 SLC10A5Q5PT55 438 aa21.64■■□□□ 1.05
RNF4-209ENST00000507784 SKAP1Q86WV1 359 aa21.64■■□□□ 1.05
RNF4-209ENST00000507784 ABCC12Q96J65 1359 aa21.63■■□□□ 1.05
RNF4-209ENST00000507784 ANKRD18BA2A2Z9 1011 aa21.63■■□□□ 1.05
RNF4-209ENST00000507784 RAB11FIP3O75154 756 aa21.63■■□□□ 1.05
RNF4-209ENST00000507784 MMP10P09238 476 aa21.63■■□□□ 1.05
RNF4-209ENST00000507784 NUCB1Q02818 461 aa21.63■■□□□ 1.05
RNF4-209ENST00000507784 CCDC152Q4G0S7 254 aa21.63■■□□□ 1.05
RNF4-209ENST00000507784 PRR5LQ6MZQ0 368 aa21.63■■□□□ 1.05
RNF4-209ENST00000507784 NLRP3Q96P20 1036 aa21.63■■□□□ 1.05
RNF4-209ENST00000507784 GREM2Q9H772 168 aa21.63■■□□□ 1.05
RNF4-209ENST00000507784 CASZ1Q86V15 1759 aa21.62■■□□□ 1.05
RNF4-209ENST00000507784 SMARCA5O60264 1052 aaPredicted RBP21.62■■□□□ 1.05
RNF4-209ENST00000507784 ITGA6P23229 1130 aa21.62■■□□□ 1.05
RNF4-209ENST00000507784 CHD1LQ86WJ1 897 aa21.62■■□□□ 1.05
RNF4-209ENST00000507784 ZNF594Q96JF6 807 aaPredicted RBP21.62■■□□□ 1.05
RNF4-209ENST00000507784 LNPKQ9C0E8 428 aa21.62■■□□□ 1.05
RNF4-209ENST00000507784 PDGFDQ9GZP0 370 aaPredicted RBP21.62■■□□□ 1.05
RNF4-209ENST00000507784 NOP58Q9Y2X3 529 aaKnown RBP21.62■■□□□ 1.05
RNF4-209ENST00000507784 RGS3P49796 1198 aa21.61■■□□□ 1.05
RNF4-209ENST00000507784 PTPN12Q05209 780 aaKnown RBP21.61■■□□□ 1.05
RNF4-209ENST00000507784 COPRSQ9NQ92 184 aa21.61■■□□□ 1.05
RNF4-209ENST00000507784 C3orf67Q6ZVT6 689 aa21.6■■□□□ 1.05
RNF4-209ENST00000507784 LRRCC1Q9C099 1032 aa21.6■■□□□ 1.05
RNF4-209ENST00000507784 R3HDM1Q15032 1099 aaKnown RBP21.59■■□□□ 1.05
RNF4-209ENST00000507784 ERC1Q8IUD2 1116 aa21.59■■□□□ 1.05
RNF4-209ENST00000507784 SLC16A10Q8TF71 515 aa21.59■■□□□ 1.05
RNF4-209ENST00000507784 SF3B3Q15393 1217 aaKnown RBP21.58■■□□□ 1.05
RNF4-209ENST00000507784 RHPN1Q8TCX5 695 aa21.58■■□□□ 1.05
RNF4-209ENST00000507784 KIF1BPQ96EK5 621 aa21.58■■□□□ 1.05
RNF4-209ENST00000507784 SEC31BQ9NQW1 1179 aa21.58■■□□□ 1.05
RNF4-209ENST00000507784 IL1RAPL2Q9NP60 686 aa21.57■■□□□ 1.04
RNF4-209ENST00000507784 EYA2O00167 538 aa21.56■■□□□ 1.04
RNF4-209ENST00000507784 PUS3Q9BZE2 481 aaKnown RBP21.56■■□□□ 1.04
RNF4-209ENST00000507784 TNRC6CQ9HCJ0 1690 aaKnown RBP21.56■■□□□ 1.04
RNF4-209ENST00000507784 SPEF2Q9C093 1822 aa21.55■■□□□ 1.04
RNF4-209ENST00000507784 PSDA5PKW4 1024 aaPredicted RBP21.55■■□□□ 1.04
RNF4-209ENST00000507784 PDE4AP27815 886 aa21.55■■□□□ 1.04
RNF4-209ENST00000507784 IGHMBP2P38935 993 aaKnown RBP21.55■■□□□ 1.04
RNF4-209ENST00000507784 LRRC24Q50LG9 513 aa21.55■■□□□ 1.04
RNF4-209ENST00000507784 LDHAL6AQ6ZMR3 332 aa21.55■■□□□ 1.04
RNF4-209ENST00000507784 C16orf71Q8IYS4 520 aaPredicted RBP21.55■■□□□ 1.04
RNF4-209ENST00000507784 CNNM1Q9NRU3 951 aa21.55■■□□□ 1.04
RNF4-209ENST00000507784 SASH1O94885 1247 aa21.54■■□□□ 1.04
RNF4-209ENST00000507784 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
RNF4-209ENST00000507784 DDX46Q7L014 1031 aaKnown RBP21.54■■□□□ 1.04
RNF4-209ENST00000507784 CDC5LQ99459 802 aaKnown RBP21.54■■□□□ 1.04
RNF4-209ENST00000507784 MPHOSPH8Q99549 860 aa21.54■■□□□ 1.04
RNF4-209ENST00000507784 NRXN2Q9P2S2 1712 aa21.54■■□□□ 1.04
RNF4-209ENST00000507784 TAF1P21675 1872 aa21.54■■□□□ 1.04
RNF4-209ENST00000507784 RTL9Q8NET4 1388 aa21.53■■□□□ 1.04
RNF4-209ENST00000507784 CIAO1O76071 339 aa21.53■■□□□ 1.04
RNF4-209ENST00000507784 IL15P40933 162 aaPredicted RBP21.53■■□□□ 1.04
RNF4-209ENST00000507784 TFCP2Q12800 502 aa21.53■■□□□ 1.04
RNF4-209ENST00000507784 ANKRD18AQ8IVF6 992 aa21.53■■□□□ 1.04
RNF4-209ENST00000507784 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
RNF4-209ENST00000507784 RPGRQ92834 1020 aaKnown RBP21.53■■□□□ 1.04
RNF4-209ENST00000507784 ATF5Q9Y2D1 282 aaPredicted RBP21.53■■□□□ 1.04
RNF4-209ENST00000507784 ATG9AQ7Z3C6 839 aa21.52■■□□□ 1.04
RNF4-209ENST00000507784 CLASRPQ8N2M8 674 aaKnown RBP21.52■■□□□ 1.04
RNF4-209ENST00000507784 FBXO3Q9UK99 471 aa21.52■■□□□ 1.04
RNF4-209ENST00000507784 RIC1Q4ADV7 1423 aa21.52■■□□□ 1.04
RNF4-209ENST00000507784 BRIP1Q9BX63 1249 aa21.51■■□□□ 1.03
RNF4-209ENST00000507784 ANKRD31Q8N7Z5 1873 aa21.51■■□□□ 1.03
RNF4-209ENST00000507784 METTL24Q5JXM2 366 aa21.5■■□□□ 1.03
RNF4-209ENST00000507784 RBM17Q96I25 401 aaKnown RBP21.5■■□□□ 1.03
RNF4-209ENST00000507784 CEP126Q9P2H0 1117 aa21.5■■□□□ 1.03
RNF4-209ENST00000507784 PDE6BP35913 854 aa21.49■■□□□ 1.03
RNF4-209ENST00000507784 AACSQ86V21 672 aa21.49■■□□□ 1.03
RNF4-209ENST00000507784 OTUD7AQ8TE49 926 aaPredicted RBP21.49■■□□□ 1.03
RNF4-209ENST00000507784 CELF1Q92879 486 aaKnown RBP21.49■■□□□ 1.03
RNF4-209ENST00000507784 IFIT2P09913 472 aaKnown RBP21.48■■□□□ 1.03
RNF4-209ENST00000507784 POLD1P28340 1107 aa21.48■■□□□ 1.03
RNF4-209ENST00000507784 RPS8P62241 208 aaKnown RBP21.48■■□□□ 1.03
RNF4-209ENST00000507784 MTFR1LQ9H019 292 aa21.48■■□□□ 1.03
RNF4-209ENST00000507784 RIPOR2Q9Y4F9 1068 aa21.48■■□□□ 1.03
RNF4-209ENST00000507784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.48■■□□□ 1.03
RNF4-209ENST00000507784 CCDC8Q9H0W5 538 aaPredicted RBP21.47■■□□□ 1.03
RNF4-209ENST00000507784 GRAPQ13588 217 aa21.46■■□□□ 1.03
RNF4-209ENST00000507784 TNNI3KQ59H18 835 aa21.46■■□□□ 1.03
RNF4-209ENST00000507784 C2CD5Q86YS7 1000 aa21.46■■□□□ 1.03
RNF4-209ENST00000507784 PLEKHM2Q8IWE5 1019 aa21.46■■□□□ 1.03
RNF4-209ENST00000507784 HELBQ8NG08 1087 aaPredicted RBP21.46■■□□□ 1.03
RNF4-209ENST00000507784 GRAPLQ8TC17 118 aaPredicted RBP21.46■■□□□ 1.03
RNF4-209ENST00000507784 NEUROD6Q96NK8 337 aa21.46■■□□□ 1.03
RNF4-209ENST00000507784 FPGT-TNNI3KV9GXZ4 949 aa21.46■■□□□ 1.03
RNF4-209ENST00000507784 MROH5Q6ZUA9 1318 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms