RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 CDHR2Q9BYE9 1310 aa19.86■□□□□ 0.77
COL1A1-211ENST00000507689 IGKV5-2P06315 115 aa19.85■□□□□ 0.77
COL1A1-211ENST00000507689 LARGE2Q8N3Y3 721 aa19.85■□□□□ 0.77
COL1A1-211ENST00000507689 MPNDQ8N594 471 aa19.85■□□□□ 0.77
COL1A1-211ENST00000507689 CT47B1P0C2W7 299 aaPredicted RBP19.84■□□□□ 0.77
COL1A1-211ENST00000507689 HNRNPUQ00839 825 aaKnown RBP eCLIP19.84■□□□□ 0.77
COL1A1-211ENST00000507689 GCKRQ14397 625 aa19.84■□□□□ 0.77
COL1A1-211ENST00000507689 SLC4A10Q6U841 1118 aa19.84■□□□□ 0.77
COL1A1-211ENST00000507689 UBE3BQ7Z3V4 1068 aa19.84■□□□□ 0.77
COL1A1-211ENST00000507689 JARID2Q92833 1246 aaPredicted RBP19.84■□□□□ 0.77
COL1A1-211ENST00000507689 CDCA7LQ96GN5 454 aa19.84■□□□□ 0.77
COL1A1-211ENST00000507689 RRAGCQ9HB90 399 aa19.84■□□□□ 0.77
COL1A1-211ENST00000507689 NMRK2Q9NPI5 230 aa19.84■□□□□ 0.77
COL1A1-211ENST00000507689 VEGFAP15692 232 aaPredicted RBP19.83■□□□□ 0.77
COL1A1-211ENST00000507689 PRELPP51888 382 aa19.83■□□□□ 0.77
COL1A1-211ENST00000507689 EIF6P56537 245 aaKnown RBP19.83■□□□□ 0.77
COL1A1-211ENST00000507689 RPS8P62241 208 aaKnown RBP19.83■□□□□ 0.77
COL1A1-211ENST00000507689 NIM1KQ8IY84 436 aa19.83■□□□□ 0.77
COL1A1-211ENST00000507689 CDC5LQ99459 802 aaKnown RBP19.83■□□□□ 0.77
COL1A1-211ENST00000507689 VPS33BQ9H267 617 aa19.83■□□□□ 0.77
COL1A1-211ENST00000507689 TIAM2Q8IVF5 1701 aa19.82■□□□□ 0.76
COL1A1-211ENST00000507689 F6X3S4 739 aa19.82■□□□□ 0.76
COL1A1-211ENST00000507689 PPIP5K2O43314 1243 aa19.82■□□□□ 0.76
COL1A1-211ENST00000507689 CTSWP56202 376 aa19.82■□□□□ 0.76
COL1A1-211ENST00000507689 CCDC88AQ3V6T2 1871 aa19.82■□□□□ 0.76
COL1A1-211ENST00000507689 PTPRCP08575 1304 aa19.81■□□□□ 0.76
COL1A1-211ENST00000507689 TOMM70O94826 608 aa19.81■□□□□ 0.76
COL1A1-211ENST00000507689 ALDH1L2Q3SY69 923 aa19.81■□□□□ 0.76
COL1A1-211ENST00000507689 ANKRD18AQ8IVF6 992 aa19.81■□□□□ 0.76
COL1A1-211ENST00000507689 CCDC85AQ96PX6 553 aaPredicted RBP19.81■□□□□ 0.76
COL1A1-211ENST00000507689 SMC4Q9NTJ3 1288 aa19.81■□□□□ 0.76
COL1A1-211ENST00000507689 C9orf78Q9NZ63 289 aaPredicted RBP19.81■□□□□ 0.76
COL1A1-211ENST00000507689 DDX60Q8IY21 1712 aaKnown RBP19.81■□□□□ 0.76
COL1A1-211ENST00000507689 LAMB2P55268 1798 aa19.8■□□□□ 0.76
COL1A1-211ENST00000507689 H7C1W4 665 aa19.8■□□□□ 0.76
COL1A1-211ENST00000507689 KIF3CO14782 793 aa19.8■□□□□ 0.76
COL1A1-211ENST00000507689 CELF1Q92879 486 aaKnown RBP19.8■□□□□ 0.76
COL1A1-211ENST00000507689 SRCIN1Q9C0H9 1055 aa19.8■□□□□ 0.76
COL1A1-211ENST00000507689 NSFL1CQ9UNZ2 370 aaKnown RBP19.8■□□□□ 0.76
COL1A1-211ENST00000507689 IQCA1LA6NCM1 817 aa19.79■□□□□ 0.76
COL1A1-211ENST00000507689 ALDH1L1O75891 902 aa19.79■□□□□ 0.76
COL1A1-211ENST00000507689 MRPL50Q8N5N7 158 aaKnown RBP19.79■□□□□ 0.76
COL1A1-211ENST00000507689 EYA3Q99504 573 aa19.79■□□□□ 0.76
COL1A1-211ENST00000507689 ANKIB1Q9P2G1 1089 aa19.79■□□□□ 0.76
COL1A1-211ENST00000507689 G3V3G9 751 aa19.78■□□□□ 0.76
COL1A1-211ENST00000507689 C6orf229H3BNL8 230 aa19.78■□□□□ 0.76
COL1A1-211ENST00000507689 BEND3Q5T5X7 828 aa19.78■□□□□ 0.76
COL1A1-211ENST00000507689 DCAF8Q5TAQ9 597 aa19.78■□□□□ 0.76
COL1A1-211ENST00000507689 SSH1Q8WYL5 1049 aa19.78■□□□□ 0.76
COL1A1-211ENST00000507689 DICER1Q9UPY3 1922 aaKnown RBP19.78■□□□□ 0.76
COL1A1-211ENST00000507689 DDNO94850 711 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-211ENST00000507689 IGHMBP2P38935 993 aaKnown RBP19.77■□□□□ 0.76
COL1A1-211ENST00000507689 AOC3Q16853 763 aa19.77■□□□□ 0.76
COL1A1-211ENST00000507689 TRMT2AQ8IZ69 625 aaKnown RBP19.77■□□□□ 0.76
COL1A1-211ENST00000507689 BCL2L13Q9BXK5 485 aa19.77■□□□□ 0.76
COL1A1-211ENST00000507689 RTFDC1Q9BY42 306 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-211ENST00000507689 SEC31BQ9NQW1 1179 aa19.77■□□□□ 0.76
COL1A1-211ENST00000507689 CHMP3Q9Y3E7 222 aa19.77■□□□□ 0.76
COL1A1-211ENST00000507689 GRM8O00222 908 aa19.76■□□□□ 0.75
COL1A1-211ENST00000507689 TTLL11Q8NHH1 800 aa19.76■□□□□ 0.75
COL1A1-211ENST00000507689 RBM46Q8TBY0 533 aaKnown RBP19.76■□□□□ 0.75
COL1A1-211ENST00000507689 PLA2G12BQ9BX93 195 aa19.76■□□□□ 0.75
COL1A1-211ENST00000507689 FZD9O00144 591 aa19.75■□□□□ 0.75
COL1A1-211ENST00000507689 LMOD1P29536 600 aaPredicted RBP19.75■□□□□ 0.75
COL1A1-211ENST00000507689 WASHC4Q2M389 1173 aa19.75■□□□□ 0.75
COL1A1-211ENST00000507689 GPC2Q8N158 579 aa19.75■□□□□ 0.75
COL1A1-211ENST00000507689 MPHOSPH8Q99549 860 aa19.75■□□□□ 0.75
COL1A1-211ENST00000507689 GJA3Q9Y6H8 435 aa19.75■□□□□ 0.75
COL1A1-211ENST00000507689 KIAA2012Q0VF49 1180 aa19.74■□□□□ 0.75
COL1A1-211ENST00000507689 SMC1BQ8NDV3 1235 aa19.74■□□□□ 0.75
COL1A1-211ENST00000507689 GREM2Q9H772 168 aa19.74■□□□□ 0.75
COL1A1-211ENST00000507689 GGA1Q9UJY5 639 aa19.74■□□□□ 0.75
COL1A1-211ENST00000507689 ZNRF3Q9ULT6 936 aa19.74■□□□□ 0.75
COL1A1-211ENST00000507689 RTL9Q8NET4 1388 aa19.73■□□□□ 0.75
COL1A1-211ENST00000507689 ANKRD18BA2A2Z9 1011 aa19.73■□□□□ 0.75
COL1A1-211ENST00000507689 GPSM2P81274 684 aa19.73■□□□□ 0.75
COL1A1-211ENST00000507689 FSTL1Q12841 308 aa19.73■□□□□ 0.75
COL1A1-211ENST00000507689 IFIT5Q13325 482 aaKnown RBP19.73■□□□□ 0.75
COL1A1-211ENST00000507689 TAF7LQ5H9L4 462 aa19.73■□□□□ 0.75
COL1A1-211ENST00000507689 ZC3H12CQ9C0D7 883 aaKnown RBP19.73■□□□□ 0.75
COL1A1-211ENST00000507689 SNED1Q8TER0 1413 aa19.73■□□□□ 0.75
COL1A1-211ENST00000507689 ZNF541Q9H0D2 1346 aa19.73■□□□□ 0.75
COL1A1-211ENST00000507689 UFL1O94874 794 aa19.72■□□□□ 0.75
COL1A1-211ENST00000507689 ITGA6P23229 1130 aa19.72■□□□□ 0.75
COL1A1-211ENST00000507689 TNIP1Q15025 636 aa19.72■□□□□ 0.75
COL1A1-211ENST00000507689 API5Q9BZZ5 524 aaKnown RBP19.72■□□□□ 0.75
COL1A1-211ENST00000507689 BSDC1Q9NW68 430 aaPredicted RBP19.72■□□□□ 0.75
COL1A1-211ENST00000507689 HACL1Q9UJ83 578 aa19.72■□□□□ 0.75
COL1A1-211ENST00000507689 XDHP47989 1333 aa19.72■□□□□ 0.75
COL1A1-211ENST00000507689 RIMBP2O15034 1052 aa19.71■□□□□ 0.75
COL1A1-211ENST00000507689 CCDC57Q2TAC2 916 aa19.71■□□□□ 0.75
COL1A1-211ENST00000507689 L3MBTL3Q96JM7 780 aaPredicted RBP19.71■□□□□ 0.75
COL1A1-211ENST00000507689 KIF16BQ96L93 1317 aa19.71■□□□□ 0.75
COL1A1-211ENST00000507689 IPO8O15397 1037 aaKnown RBP19.7■□□□□ 0.74
COL1A1-211ENST00000507689 ATP2B4P23634 1241 aa19.7■□□□□ 0.74
COL1A1-211ENST00000507689 FAM161AQ3B820 660 aa19.7■□□□□ 0.74
COL1A1-211ENST00000507689 PODXL2Q9NZ53 605 aa19.7■□□□□ 0.74
COL1A1-211ENST00000507689 HDAC5Q9UQL6 1122 aa19.7■□□□□ 0.74
COL1A1-211ENST00000507689 WDR90Q96KV7 1748 aa19.7■□□□□ 0.74
COL1A1-211ENST00000507689 MYH3P11055 1940 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms