RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PIM2Q9P1W9 311 aa25.11■■□□□ 1.61
USP53-203ENST00000507597 CHMP3Q9Y3E7 222 aa25.11■■□□□ 1.61
USP53-203ENST00000507597 CSF1RP07333 972 aa25.1■■□□□ 1.61
USP53-203ENST00000507597 HOXA10P31260 410 aaPredicted RBP25.1■■□□□ 1.61
USP53-203ENST00000507597 CCDC57Q2TAC2 916 aa25.1■■□□□ 1.61
USP53-203ENST00000507597 TTLL11Q8NHH1 800 aa25.1■■□□□ 1.61
USP53-203ENST00000507597 CDC5LQ99459 802 aaKnown RBP25.1■■□□□ 1.61
USP53-203ENST00000507597 DPEP1P16444 411 aa25.09■■□□□ 1.61
USP53-203ENST00000507597 IFIT5Q13325 482 aaKnown RBP25.09■■□□□ 1.61
USP53-203ENST00000507597 LMBR1LQ6UX01 489 aa25.09■■□□□ 1.61
USP53-203ENST00000507597 TMC4Q7Z404 712 aa25.09■■□□□ 1.61
USP53-203ENST00000507597 TTLL6Q8N841 843 aa25.09■■□□□ 1.61
USP53-203ENST00000507597 BICC1Q9H694 974 aaKnown RBP25.09■■□□□ 1.61
USP53-203ENST00000507597 LRRFIP2Q9Y608 721 aaKnown RBP25.09■■□□□ 1.61
USP53-203ENST00000507597 A0A0G2JLW4 131 aa25.08■■□□□ 1.61
USP53-203ENST00000507597 ANKRD18BA2A2Z9 1011 aa25.08■■□□□ 1.61
USP53-203ENST00000507597 NEFLP07196 543 aa25.08■■□□□ 1.61
USP53-203ENST00000507597 FOXO4P98177 505 aa25.08■■□□□ 1.61
USP53-203ENST00000507597 KIF13BQ9NQT8 1826 aa25.07■■□□□ 1.6
USP53-203ENST00000507597 RTL9Q8NET4 1388 aa25.07■■□□□ 1.6
USP53-203ENST00000507597 BBOX1O75936 387 aa25.07■■□□□ 1.6
USP53-203ENST00000507597 CHRNA5P30532 468 aa25.07■■□□□ 1.6
USP53-203ENST00000507597 RABL6Q3YEC7 729 aaPredicted RBP25.07■■□□□ 1.6
USP53-203ENST00000507597 TAF7LQ5H9L4 462 aa25.07■■□□□ 1.6
USP53-203ENST00000507597 GRAPQ13588 217 aa25.06■■□□□ 1.6
USP53-203ENST00000507597 GRAPLQ8TC17 118 aaPredicted RBP25.06■■□□□ 1.6
USP53-203ENST00000507597 ZBTB40Q9NUA8 1239 aa25.06■■□□□ 1.6
USP53-203ENST00000507597 LAMB2P55268 1798 aa25.05■■□□□ 1.6
USP53-203ENST00000507597 DCAF8L1A6NGE4 600 aa25.05■■□□□ 1.6
USP53-203ENST00000507597 IGHMBP2P38935 993 aaKnown RBP25.05■■□□□ 1.6
USP53-203ENST00000507597 DALRD3Q5D0E6 543 aaKnown RBP25.05■■□□□ 1.6
USP53-203ENST00000507597 ANKRD18AQ8IVF6 992 aa25.05■■□□□ 1.6
USP53-203ENST00000507597 CRBNQ96SW2 442 aa25.05■■□□□ 1.6
USP53-203ENST00000507597 ITGA6P23229 1130 aa25.04■■□□□ 1.6
USP53-203ENST00000507597 SOGA3Q5TF21 947 aa25.04■■□□□ 1.6
USP53-203ENST00000507597 RPAP2Q8IXW5 612 aaPredicted RBP25.04■■□□□ 1.6
USP53-203ENST00000507597 DDX60Q8IY21 1712 aaKnown RBP25.03■■□□□ 1.6
USP53-203ENST00000507597 RPS8P62241 208 aaKnown RBP25.03■■□□□ 1.6
USP53-203ENST00000507597 GRIPAP1Q4V328 841 aa25.03■■□□□ 1.6
USP53-203ENST00000507597 EPHA10Q5JZY3 1008 aa25.03■■□□□ 1.6
USP53-203ENST00000507597 C3orf67Q6ZVT6 689 aa25.03■■□□□ 1.6
USP53-203ENST00000507597 NLGN2Q8NFZ4 835 aa25.03■■□□□ 1.6
USP53-203ENST00000507597 KAZALD1Q96I82 304 aa25.03■■□□□ 1.6
USP53-203ENST00000507597 CCDC85AQ96PX6 553 aaPredicted RBP25.03■■□□□ 1.6
USP53-203ENST00000507597 MPHOSPH8Q99549 860 aa25.03■■□□□ 1.6
USP53-203ENST00000507597 GREM2Q9H772 168 aa25.03■■□□□ 1.6
USP53-203ENST00000507597 HMMRO75330 724 aa25.02■■□□□ 1.6
USP53-203ENST00000507597 KCNA3P22001 575 aa25.02■■□□□ 1.6
USP53-203ENST00000507597 MTX1Q13505 466 aa25.02■■□□□ 1.6
USP53-203ENST00000507597 CC2D2BQ6DHV5 1058 aa25.02■■□□□ 1.6
USP53-203ENST00000507597 ANKRD31Q8N7Z5 1873 aa25.02■■□□□ 1.6
USP53-203ENST00000507597 FAM161AQ3B820 660 aa25.01■■□□□ 1.59
USP53-203ENST00000507597 ANKRD44Q8N8A2 993 aa25.01■■□□□ 1.59
USP53-203ENST00000507597 SRGAP3O43295 1099 aa25■■□□□ 1.59
USP53-203ENST00000507597 ATP8B2P98198 1209 aa25■■□□□ 1.59
USP53-203ENST00000507597 MYH3P11055 1940 aa25■■□□□ 1.59
USP53-203ENST00000507597 PPEF1O14829 653 aaPredicted RBP24.99■■□□□ 1.59
USP53-203ENST00000507597 PRPF40BQ6NWY9 871 aaKnown RBP24.99■■□□□ 1.59
USP53-203ENST00000507597 TNRC6CQ9HCJ0 1690 aaKnown RBP24.99■■□□□ 1.59
USP53-203ENST00000507597 FBXO3Q9UK99 471 aa24.99■■□□□ 1.59
USP53-203ENST00000507597 BCS1LQ9Y276 419 aa24.99■■□□□ 1.59
USP53-203ENST00000507597 C1orf115Q9H7X2 142 aa24.98■■□□□ 1.59
USP53-203ENST00000507597 SEC31BQ9NQW1 1179 aa24.98■■□□□ 1.59
USP53-203ENST00000507597 BSDC1Q9NW68 430 aaPredicted RBP24.98■■□□□ 1.59
USP53-203ENST00000507597 LDHAL6AQ6ZMR3 332 aa24.97■■□□□ 1.59
USP53-203ENST00000507597 SP8Q8IXZ3 490 aa24.97■■□□□ 1.59
USP53-203ENST00000507597 CEP85Q6P2H3 762 aa24.96■■□□□ 1.59
USP53-203ENST00000507597 CELF1Q92879 486 aaKnown RBP24.96■■□□□ 1.59
USP53-203ENST00000507597 CNNM1Q9NRU3 951 aa24.96■■□□□ 1.59
USP53-203ENST00000507597 ATP6V0A2Q9Y487 856 aa24.95■■□□□ 1.58
USP53-203ENST00000507597 GRIN3BO60391 1043 aa24.94■■□□□ 1.58
USP53-203ENST00000507597 GPR162Q16538 588 aa24.94■■□□□ 1.58
USP53-203ENST00000507597 CCDC93Q567U6 631 aa24.94■■□□□ 1.58
USP53-203ENST00000507597 RTKN2Q8IZC4 609 aa24.94■■□□□ 1.58
USP53-203ENST00000507597 PELP1Q8IZL8 1130 aaKnown RBP24.94■■□□□ 1.58
USP53-203ENST00000507597 EXOC6Q8TAG9 804 aa24.94■■□□□ 1.58
USP53-203ENST00000507597 ANKRD2Q9GZV1 360 aa24.94■■□□□ 1.58
USP53-203ENST00000507597 HSP90AB4PQ58FF6 505 aa24.93■■□□□ 1.58
USP53-203ENST00000507597 SSH3Q8TE77 659 aa24.93■■□□□ 1.58
USP53-203ENST00000507597 COPRSQ9NQ92 184 aa24.93■■□□□ 1.58
USP53-203ENST00000507597 DLEC1Q9Y238 1755 aa24.93■■□□□ 1.58
USP53-203ENST00000507597 C21orf2O43822 256 aa24.92■■□□□ 1.58
USP53-203ENST00000507597 IRX6P78412 446 aaPredicted RBP24.92■■□□□ 1.58
USP53-203ENST00000507597 PTPN12Q05209 780 aaKnown RBP24.91■■□□□ 1.58
USP53-203ENST00000507597 G3BP1Q13283 466 aaKnown RBP eCLIP24.91■■□□□ 1.58
USP53-203ENST00000507597 COL11A2P13942 1736 aaPredicted RBP24.91■■□□□ 1.58
USP53-203ENST00000507597 MROH5Q6ZUA9 1318 aa24.9■■□□□ 1.58
USP53-203ENST00000507597 KIAA1551Q9HCM1 1747 aa24.9■■□□□ 1.58
USP53-203ENST00000507597 PNMA6EA0A0J9YXQ4 647 aa24.9■■□□□ 1.58
USP53-203ENST00000507597 CIAO1O76071 339 aa24.9■■□□□ 1.58
USP53-203ENST00000507597 RFX5P48382 616 aaPredicted RBP24.9■■□□□ 1.58
USP53-203ENST00000507597 POLA2Q14181 598 aa24.9■■□□□ 1.58
USP53-203ENST00000507597 SUPT20HQ8NEM7 779 aa24.9■■□□□ 1.58
USP53-203ENST00000507597 EYA2O00167 538 aa24.89■■□□□ 1.58
USP53-203ENST00000507597 IL15P40933 162 aaPredicted RBP24.89■■□□□ 1.58
USP53-203ENST00000507597 ERICH6BQ5W0A0 696 aa24.89■■□□□ 1.58
USP53-203ENST00000507597 MPNDQ8N594 471 aa24.89■■□□□ 1.58
USP53-203ENST00000507597 ZNF594Q96JF6 807 aaPredicted RBP24.89■■□□□ 1.58
USP53-203ENST00000507597 ANKIB1Q9P2G1 1089 aa24.89■■□□□ 1.58
USP53-203ENST00000507597 ZNF219Q9P2Y4 722 aaPredicted RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms